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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0346600 |
| Transcript ID | LotjaGi1g1v0346600.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | FBD-associated F-box protein; TAIR: AT4G26340.1 F-box/RNI-like/FBD-like domains-containing protein; Swiss-Prot: sp|Q8H1R7|FDL27_ARATH F-box/FBD/LRR-repeat protein At4g26340; TrEMBL-Plants: tr|I3SQ21|I3SQ21_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0346600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:81374333..81383179) extracted from Lotus japonicus Gifu genome v1.2.
GGAAAACTGACATGCTACTGTTTATGTACAGTTTTCCTTCCCCCTCCATTTTCATCCCCCTCCCAAACACACAAAGATAC CTTTTTCCACTCCTTTTCCCTTCTACCTACTTCCTTCCTTCCAAATTACACCCATCCAAACACAGTGATTGAAAAAAACT TTACAAGTAAATTCAATCTGATCCAAAAGACTCAATAGCATCAACCAGCCCAAAAGCCTGAAAAGTTTGGGTTAAATCGG ATGTCGAGATTGGTTTTTACTCATGGACCCATTGTCCAATTGACATCCCCGATCAACGTAGTGGCAAAGCTTCTGATGCC CTTTCTCCTTCCACCTTGACCCTTTCACTTCACAAACCCTGTTTTCTTACCCCATCCATCACCACTCTAGACACGCACGA AGAAAAACCATTGTTCCCAGAGCCAGTTTTGAGCACCATCTAATCCCCGTGCTTCCACAGATTCTGATCGGAATTATGGA TGACAGAATTAGCACTTTGACAGATGATCTCCTCTGTCGCATCCTCTCGTTTCTTCCAACGGAACAAGCAGTTGCCACAA GCATTCTTTCAAAGAGGTGGAAGCCTATCTGGATCTCAGTCCCCGTTCTCGACTTCGACAATCAAACCCATCTGAGAAAA GGTAAACCCTCATATTCCTTTGAAAGGTTAATATACGCAACCATTCAAGCTAGAGATCCGCAACAATCCATTAAAACTTT TCGTCTCAAATATGAGCTTCTTGACCTTGAACTTTCGGAGGAACGAGCGAATGCTGATATCAATGTTTGGATAAAAACTG CTATAAACCATGGGGTTGAGAACCTTGAAATCTACCTTGATTGCAACTCTGTGCCTTTCGATTATATCGTTAGGTTAACC TGCTGCGGCATTTTCAGCTGCAAAACCCTTGTTGTTCTCAAGTTGAAAGAGGTATCTCTAGCTGCTTCTGGTTCTGTTGA GCTTCCCTCACTCAAATGCCTATGGTTGCTACGTGTTGAATTTGAAGAGCCTCAATATCTTATGGAGCTTCTTTATGGAT GTCCAGAGCTTGAAGATTTGAAAACAATTTTTCTAGATTATGCTCATGGTGGATCTTTTTGTAAGGAACGGTTTAAGATC TTACCCAAATTGGTCAGGGCGGATATACGTTCTTCTGGTATGGAAATTATGGATGGTAACAGTACTAGTATTCTTATGAA AGCAATATCTAATGTGGAGTTTATGAACATCACAGAGGTTTGATTTGAATATATTCGATAGAAATGTGTTTAGTTTGTTG ATTGGTTTTGTTTTTAGATTACTGTCACCTATATTTCTCATAATTTGTCTCTATCACTATTGCAGTTTCGAGTTAATGAT TCGGTTCCAGAATTTCCTCATTTAAGGCATTTGACCCTCTCGCTGATTTCTACTGTTAAAAGCTCAAATTTGATGCTTTT GATGCTCAAGAATTGCCCCAAGGTTCAAAGTTTTGAACTTTTTGGATCTTTTAAAGATGACGATGTTCTACATTACCCTC ATTTTGTTCCTGAATGCCTTACTTCATGCTTAACTAAGTGCTATCTCAAACGTTTCGAAGGCACAGAAAATGACCTACAA TTTGCAAAGTATATTATGCAGAACTCGACATATTTACAGTCCATGAAGATTCTTAGTCTTTCACCTGATCCACTTGAAGT GTTGAAGGAGTTAGCTATGTACCCGAGGAAATCCGCATCATGTGAACTTTCATTTGATCGATAGGCTTGTAAGTAACTGC AAACTTTTCCTAAATGACAGACAACATGTGCCGTTTGTTAAAAAATGCCAAAAACTGGATTTGAAGGGCTTGGACTTTGT AATTTAGTGTCTCTGTGTACCCATTATCTGGTTATTGTATGATGCTTGACCACTAGATGTGAGGCTTTAAATGGACTGGA AATTACTATTTCATATGCTGATGATGTACTGTTTTCCCTATTGAAAAAAGATGTTTTTTCTTCTTTCTTATGATAGTATT ATGACATAACTCTTGGTCAGTGGCTGGTCATTTTATAAGATACATGCAGAAGCTTCAATTCCATGCCTTAATAAGCTGGT ATGATTTAGTGATACTACAAATTGACATCAAAATCCTTTCTAGTTGTTGTAAGAGTCACATTTTGTGTTAATATTTGGCA TATTAGCTTGCTGCATGCTTTTATCTAGGAGAGTGCTTTTGACTGTGCTAGATTTGAAATGTTAAGAATTTTTGTGCGAT TAACTTTCTTGATTCGATGAAATGTAGGCCTTTGAGAATTTAGTCATTGTTTTATCTCCCCTAGTTTTACTTGGTGTGCA CCTAATTTGATCTCCAATGCTTAATGCATTGTTCTCGAACACAAACCGTTATTAGAAAACATACCTCATAAAGATAAAAC CCGTTCTTCAATTTAACAGAGGAAACCTTAAGGTTGAGTCCTGCCGTAGCTAGCCTGTGCATACTTCTGAGTATTTTATG TGATTCTTAGGGTATTTCTCTACACTGTTTGATTTTCCGAGTAGCATCAAAGTTTCTAATTATATATCAATTTTGTGATT TTGTCTTCTCATCTAGAAAAGTAGTCATATTTTAACTTCTTGGCTAAAATGCATTAATCATGGTTGTTGTCTGGGCAAGC TTATCATCTGGAATCATGGTTAAGTTGTTGAAGTGATGGTGAAATATGTTATTAATATACACTATCATTCTTAAATCACT ATGAACCTGCTTAAAATTTGGTGATTTTTACTGCTGATGAGCTAGTTTCGTGTTACTAAAATATTTCAGCTGAAACTTTT GTCTTTGGATTATTCTTGACAATGAAAAGATAATTTGTTTCATTGAAGTTTCAACTACTGTTTGTGCTTAGGATATCTAT ATAATACTTGATTCATATGAATCATATTATTAAAGTCAACTCTTCTTCCTAGACTCGAGACTTCCTTGTTCCCCATGGCT CTGGTTTTTATTGCCATTTTCTTTCTATTAAACATCACAAATTCTTCCAATGGCTACACGCCTTGTGAGCCATTCATTTG TGGTAACGTTTCGAAAGAAAATCTAACCTATCCATATTGGAATGGGAAACAGTCGGCCGAATGCGGTCACCTAGCCTACA AACTTAACTGTGATGAAGATCCAGTGACCCTTGATATGAATTCTGAAAAGTTCGTCGTCCTAGAAATAAATCAGGAGACG GGAATTTTAAAGATTGTGCCAATACATATATTTGAATTCAATGGAACTTGTCCCAAGGAGTATAAGAATACCAGCTTGGA TTCAAAATTCTTCAACTACACCTTGAGGGATGGACAATTTAATCTATTTTACGATTGTGGTAATCGTTCTCTCATGTCCC CTCTAAATCACATACCATATACAAATTATAGATGTGACGCAGATGACGGTCTACGTTATGAATATTTGGTATCTACTAAT AATTTTGTCTATTTTACAAAACTTGGATGTAAAACTATATTTTTTTTACCTCCAAATTTTGTAAAATAAACAAAATTATT AGTAGATACCAAATATCCATAACGTAGTCGTAGACCGTCATCTGCGTCACATCTATAATTTGTATATGGTATGTGATTTA GAGGGGACATGAGAGGACGATTACCACAATCGTAAAATAGATTAAACTGTCCATCCTCAAGGTGTAGTTGAAGAATTTTG AATCCAAGCTGGCATTCTTATACTCCTTGGGACAAGTTCCATTGAATTCAAATATATGTATTGACACAATCTTTAAAATT CCCGTCTCCTGATTTATTTCTAGGTCGATGAACTTTTCAGAATTCATATCAAGGGTCACTGGATCTTCATCACAGTTAAG TTTGTAGGCTGGGTGACCGCATTCGGCCGACTGTTTCCCATTCCAATATGGATAAGTTAGATTTTCTTTCGAAACGTTAC CACAAATGAATGGCTCACAAGGCGGGTAGCCATTGGAAGAATTTGTGATGTTTAATAGAAAGAAAAATGACAATAAAAAC CAGAGCCATGGGGAACAAGGAAGTCTTAGGAAGAAGAGTTAACTTTAATAATATGAATCAAGTATCATATAGATATTTTT TTTTCTATGGATACTAAGCTTTGAAACAAAATATTTTGAGCTGATATCAATTGAAGATAACCCCGCTGAGTTGAAGATCA CCAAGGAGAAGACCTAAGGCCCTTACAAACTATCCTCTGAACCCTTGTTCCTAGAGTGTTTGTATAAACAGATATTAGAA CAAAAAAACCATAATTATTCAAGCCTGATTAATCTATTACACTATTTGTCTGCTGCAGACAAAGGATAACATTTTGATAT ATATGTTGCTATGCACCATTGAAGTCTTCTTTTCATCAACAAAACCACTAAGCATATGGTTATTGTAGGCTTTGGTATTT GGCTATGCACCATTGAAGTCTTCTTTCTTCATCTATTACATTAGCGTCTGCTGTTCTCTTTTTCCTCCTGTGTTCTTTTC TATCGTTGTGGAGTTCTAGTTCTAGCTTCAATATTTTCAGGCTCCTTACTGACAGATTCGTCTGATTTACCAGCATTTCT GTCCCAAAGTGGCACGCCAGTATTCGATGATCCTGCCCTTCGCGCGGCACTTGGTCTTTTCACGGGTGAATCTGGATCCA CAAAATTAGCCTCTGCCCTGGGGGCACATGCTGCATTTTCGGGTCTTGACGGGGGCTTTCTCTGTGGTCTACAACTATTC GCAGCGATATTTGTTTCGTAAATTTTAGTAATATTTTGTTTCTTGGGGATGCGGACATTGGAAATCTCTGGCTGCGAAGA AGGTGGCGGGTCTGAAACAAGAATTATAGTGGATTTCCGCAATTTCTTTCTCTGTTCAAGGTTTGGTTTGATCTGTGTAT TTCCTATGTCAGAGAGAGGTTTTCTTGGAGCTTGGTCACTGTTTGTCTCAGCAGGCCTATCAGACAGTGCTCCCTGAAGT AACTCTGCACCTTGAGTAGCAAGAAGTCGGTCTTTATCTGCTTCTTCAATGCCTGGATTATTTCCTGTCCTCTGAACCAA TCCCGATTGCATTGACTCTTGTGACTCATTTGACAATGATGCTCGGTTAGCACACTTGGTTGCTAGGCAGCCACAAGAAC TCCCACAACTGTTGCCCCTGGATTTGCACTTGCATTTTGTTGTCTTGCACGATGAGATTTTACTACAAGAGCAGCAGATA TCTGATGCAGTTTCTCCATATGCAGATGCAAATCCATCTCCTAAATTGTCTTTGAGATCCTTGGGGTTGTTGGTTTTTGA CTGATTATGTTCCATGCTTGGCCGTCTGGTTAAAGATTTCCTTTTCCTTACTAATTTCCCTGATTCTTTCCACTCATCAT CCGTTGCCTCCAAATCATAATCATCCGATTCTGTCTCAGATATGTCCATGTCCTCCAGTAGAAGGGTAGACGGACGGTGT TCCTAAAGGTAAAATAAGTTTTAGAAATTAAATGAGAACCAAATAATCATTAACTGCAGTGCTAAATGCGCTATTAACTA GTATGAAATAGAATCCTTGGCATAGACGCGTAGTTGTAAGAGAGGGATTATGATCCTCTTATGTGACGTGAGAGCGTCAT GTAAAATTCAAGTACATCTCTCATGAAAACGGTGCTAAACACCCCATATAAATATAAATAGTCATAATGAAACGCTCATA GGGTTTGTGGCATGGGTAGCAAACTTTTTTGTGCCCTTCCTTCTTGACGCTCTCTGTTCGCATACCCTGTTTTTTTCCCC ATCCGTCACCACTTAAAACAACGTATTATCGGCTTATCGCCTTGCTACTTCTACTGAACGTGATCGGAAGTTCAGTTCGG CAAACATGGATGACATAATTAGCAGTTTGCCAGATGATCTTCTCTGCCACATTCTCTCGTTTCTTCCAACTTAACAAGCA GTTGTCACAAGCATTCCTTAACACTGTGTTTGGTAGGAGTGAGTTAGGGTAGAGAGAGATGGGAAGGAGAGAGTTTGAGT AGAGATTATTAAAGTAACCTTGTTTGGTTTGACAAGATAGGGGGAGAGAGGGGGCAAAATGGTGGGTCATACCCACTTTT TCATCTCTTCGCAATTTGCGAAGAGATTGGGGCTGGGTTGCTTTTTTTTTTTTTTTGTGTTTGGCAATTAGCCACTATTT GCATCTGAGCCACTTTTTTATTTAAAATTCTTATTTTAATCAAAAGTCAACTTTTTCTCTCTCTTCCACATCATTATTTC TTATCTCCCTCTTCTTTATCTCTACCCTACCAAACAACCAAATAAATCTACTCTATTTCTCACCTATTTCTCTCTACTCA ACTTCTCTATTCTCTACTCTCTCTTCTCTATCTCTCTCTATCCTGCCAAACAAAGCTTAAAAGATGTGGAAGCCTCTCTA GATCTCAGTCCCCATTCTCGACTTCAATAATTGGAACTATCCGAGATACGACGTTGAAGGGTTCAAACACGCAACCATTC TAGCCAGAGATCCGCAACAACCCATTACAAGTTTCCGACTCAAAATGCACTATTTTACTATGGACATGAGAGTGCCGATG TCAATGATTGGCTAAATATTGTTATACAACGCAGGGTTGAGAACCTTGAATTGTTGTTTGATTTCATAGAAGTATCTGAT GTAGAAGCTCATGTCATTAATTTGAGCTACAGAATTTCCAGCTGCAAAACCCTTGTTGTTCTCAACTTACAAGCGGTTTC TCTACGTGCTTGTACTGCTGTTAAGTTTCCCTCACTCAAGTCCCTAAGTTTGAGAAAGGTCAAGTTTGAAGAACCTCAAT ATTTTATGGAGCTTCTTTATGGATGTCAGGATGTCCAATGCTTGAATATTTGAGAACATTTTTTCTAGATTATGCTCATG GTGGCTCTTTTTGCAAGGAACGGTTTAAAATCTTACACAAATTGGTCAGGGTGGATATACGTTCTTCTGGTATGGAAATT ATGGATGGTAACAGTACTAGTATTCTTATGAAAGCAATATCGAATGTGGAGTTTATGAACATCACAGAGGTTCGAATATA TTCGATGGAAATGTGTTTAGTTTGTTGATTGGTTTTGTTTTTAGATTACTGTCACCTATATTTCTCAAAATTTGTCTCTA TCACTATTGCAGTTTCGCGTTAATGATTCAGTTCCAGAATTTCCTCATTTAAGGCATTTGACCCTCTCGCTGATTTCTAC AGTTAAAAGCTCAAATTTGATGCTTTTGATGCTCAATAAATTGCCCCAAGCTTCAAAGTTTTGAACTTTTGGGATCTTTT AAAGATGAGGATGTTCTACATTACCCTCATTTTGTTCCTGAATGCCTTACTTCATGCTTAACTAAGTGCTATCTCAAACG TTTCGAAGGCATAGAAAATGACCTACAATTTGCAAAGTATGTTATGCAGAACTCGACATATTTACAGTCCATGAAGATTC TTAGTCTTTCACCTGATCCACTTGAAGTATTGAAGGAGTTAGCTTTGTACCTGAGGAAATCCGCATCATGTGAACTTTCA TTTGATAGATGGGCTTGTAAGTAACTACAAACTTTCATGTGTCGTTTGTTAAAAAATGCCAAATACTGGATTTGAAGGGC TTGGACTTTGTAATTTAGTGTCTCTGTGTACCCATTATCTGGTTATTGTATGATGCTTGGCCACCAGATGTGAGGCTTTA AATGGATTGGAAATTACTATTTCATATGCTGATGATGTACTGTTTTCCCTATTGAAAAAAGATGTTTTTTCTTCTTTCTT ATGATAGTATTATGACATAACTCTTGGTCAGTGGCTGATCATTTTATAAGATACATGCAGAAGCTTCAATTCCATGCCTT AATAAGCTGGTATGATTTAGTGATACTACAAATTGACATCAGAATCCTTTCTAGTTGTTGTAAGAGTCACATTTTGTGTT AATATTTGGCATATTAGCTTGCTGCATGCTTTTGACTGTGCTTGATTTGAAATGTTAAGAATTTTTGTGCGATTAACTTT CTTGATTCGATGAAATGTAGGCCTTTGAGAATTTAGTCATTGTTTTATCTCCCTTAATTTTTCTTGGTGTGCACCTAATT TGATCTCTTGTGCTTCATGCATTGTTCTCGAACACAAACCATTATCAAAAAACATACCTCATAAAGTTAAAACCCATTCT TCAATTTAACAGAGGAAATCTTAAGGTTGAGTCCTGTTGTAACTAGCCTGTGCATACTTCTGAGAATTTTCTGTCATTCT TAGGGTATTTCTCTACCCTGTTTGATTTTCCGAGTAGCATAAATGTTTCAAAGTATCTATTTATATATCAATTTTGTGAT TTTGTCTTCTCATCTAAAAAAGTATTCATTTTTTAACTTCTAGGCTAAAATGCATTAATCATGGTTGTTGTCTGGGCAAG CTTATTATTTGCAATCATGGTTAAGTTGTAGAAGTGATGGTCAAATATGTTATTAATATACACTATCATTCTTAAATCAC TATGAACCAGCTTAAAATTTGGTGATTTTTACTGCTGATGAGCTAGTTTCGTGTTACTAAAATATTTCAGCTGAGTTTTT CGATGTATCGAAAAAAAATATTTCAGCTGAAACTTTTGTCTTTGGATTATTCTTGACAATGAAAAGATAATTTGTTCTCC AATATATTCTTTAATTACTCACACGGTTTCGAAAATCTTGGCTGGCCAAACAATTACTTTTGTTAAAAATAAAATCTTAA TTTTTTTCATTCACAAAAAAATAAATCTTAATTAAATAGAATTAGGGGTGATCGATTCGATGAAACCGATGAACCAAACC AAACCAATTAATTGGATTGGTTTTTTTTCTTGTTATTTGGTTTAAAA
CDS sequence (LotjaGi1g1v0346600.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGATGACAGAATTAGCACTTTGACAGATGATCTCCTCTGTCGCATCCTCTCGTTTCTTCCAACGGAACAAGCAGTTGC CACAAGCATTCTTTCAAAGAGGTGGAAGCCTATCTGGATCTCAGTCCCCGTTCTCGACTTCGACAATCAAACCCATCTGA GAAAAGGTAAACCCTCATATTCCTTTGAAAGGTTAATATACGCAACCATTCAAGCTAGAGATCCGCAACAATCCATTAAA ACTTTTCGTCTCAAATATGAGCTTCTTGACCTTGAACTTTCGGAGGAACGAGCGAATGCTGATATCAATGTTTGGATAAA AACTGCTATAAACCATGGGGTTGAGAACCTTGAAATCTACCTTGATTGCAACTCTGTGCCTTTCGATTATATCGTTAGGT TAACCTGCTGCGGCATTTTCAGCTGCAAAACCCTTGTTGTTCTCAAGTTGAAAGAGGTATCTCTAGCTGCTTCTGGTTCT GTTGAGCTTCCCTCACTCAAATGCCTATGGTTGCTACGTGTTGAATTTGAAGAGCCTCAATATCTTATGGAGCTTCTTTA TGGATGTCCAGAGCTTGAAGATTTGAAAACAATTTTTCTAGATTATGCTCATGGTGGATCTTTTTGTAAGGAACGGTTTA AGATCTTACCCAAATTGGTCAGGGCGGATATACGTTCTTCTGGTATGGAAATTATGGATGGTAACAGTACTAGTATTCTT ATGAAAGCAATATCTAATGTGGAGTTTATGAACATCACAGAGTTTCGAGTTAATGATTCGGTTCCAGAATTTCCTCATTT AAGGCATTTGACCCTCTCGCTGATTTCTACTGTTAAAAGCTCAAATTTGATGCTTTTGATGCTCAAGAATTGCCCCAAGG TTCAAAGTTTTGAACTTTTTGGATCTTTTAAAGATGACGATGTTCTACATTACCCTCATTTTGTTCCTGAATGCCTTACT TCATGCTTAACTAAGTGCTATCTCAAACGTTTCGAAGGCACAGAAAATGACCTACAATTTGCAAAGTATATTATGCAGAA CTCGACATATTTACAGTCCATGAAGATTCTTAGTCTTTCACCTGATCCACTTGAAGTGTTGAAGGAGTTAGCTATGTACC CGAGGAAATCCGCATCATGTGAACTTTCATTTGATCGATAG
Protein sequence (LotjaGi1g1v0346600.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MDDRISTLTDDLLCRILSFLPTEQAVATSILSKRWKPIWISVPVLDFDNQTHLRKGKPSYSFERLIYATIQARDPQQSIK TFRLKYELLDLELSEERANADINVWIKTAINHGVENLEIYLDCNSVPFDYIVRLTCCGIFSCKTLVVLKLKEVSLAASGS VELPSLKCLWLLRVEFEEPQYLMELLYGCPELEDLKTIFLDYAHGGSFCKERFKILPKLVRADIRSSGMEIMDGNSTSIL MKAISNVEFMNITEFRVNDSVPEFPHLRHLTLSLISTVKSSNLMLLMLKNCPKVQSFELFGSFKDDDVLHYPHFVPECLT SCLTKCYLKRFEGTENDLQFAKYIMQNSTYLQSMKILSLSPDPLEVLKELAMYPRKSASCELSFDR
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 2 | 382 | 381 | 2.2E-68 | – | |
| PANTHER | 2 | 382 | 381 | 2.2E-68 | – | |
| Gene3D | 2 | 323 | 322 | 3.7E-22 | ||
| SUPERFAMILY | 3 | 46 | 44 | 1.03E-9 | ||
| SUPERFAMILY | 135 | 308 | 174 | 8.11E-10 | – | |
| Pfam | 312 | 356 | 45 | 2.3E-12 | ||
| SMART | 317 | 385 | 69 | 3.6E-13 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi1g1v0346600.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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