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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0348200 |
| Transcript ID | LotjaGi1g1v0348200.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Mitochondrial carrier protein; TAIR: AT4G24570.1 dicarboxylate carrier 2; Swiss-Prot: sp|Q9SB52|PUMP4_ARATH Mitochondrial uncoupling protein 4; TrEMBL-Plants: tr|A0A0S3RD62|A0A0S3RD62_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0348200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:81704174..81705540) extracted from Lotus japonicus Gifu genome v1.2.
CTTTCACACACCCTTCCTTTGGACTTGGAATACGCCGGCGGCGCGTTTTCTTCTCTTCGTATTTGACTCTTCCCTCTTCA CAACACAAACACTATAAAATGCACCACACTCCCATCTTCTTCTTCATCACTCACCAAAATCATTACTTACAACACTTCAA CACAAACCACCACCGCAACCGTGTCTCTCTGTAGTTACAGTGATCTTGCTTTTTCAGAGAATAACATATAATGGGTCTCA AGGGATTCTTGGAAGGTGGTGTTGCTTCCATCGTTGCCGGAACCACCACTCACCCACTCGACCTCATCAAGGTTCGCATG CAGCTTCAGGGTGAGAATCTCCCGGCACACAATCTCCGGCCAGCTTTCGCCTTCCACTCACATTCAGCCACCCTTCCTCC TCCTCCTCCGTCAGGACCCATCTCCGTCGGCGTCCGAATCATCAGAACGGAAGGCGCCGCCGCTCTCTTCTCCGGCGTCT CCGCCACCGTGCTCCGGCAGACTCTCTACTCCACCACCCGCATGGGTCTCTACGACGTCCTCAAGCAGAAATGGAGCGAC CCGGAGCGCGGCACCATGCCGCTCACAAGCAAGATCACGGCGGGACTTATCGCCGGAGGGATCGGCGCCGCCGTGGGGAA CCCCGCGGATGTTGCGATGGTGCGTATGCAGGCTGATGGGAGACTCCCGGCGGCTCAGCGGCGGAATTATAAGGGAGTTT TCGACGCGATCCGGCGGATGGCGGGGGAAGAGGGGATTGGTTCCCTGTGGCGCGGGTCAGGGCTTACGGTGAACCGCGCG ATGATCGTGACGGCTTCTCAGCTGGCGTCGTACGACCAGTTCAAGGAGACACTTGTTGGGAAAGGGTGGATGAACGATGG TATTGGGACCCACGTGGCGGCGAGCTTTGCGGCGGGGTTTGTGGCGGCGGTGGCGTCGAACCCGGTGGATGTGATCAAAA CTAGGGTTATGAACATGAAGGTGGAGGCTGGGGAGGCCCCACCCTACAATGGGGCATTGGATTGTGCACTCAAGACTGTC AAGGCTGAAGGACCATTGGCACTTTACAAGGGTTTCATCCCTACAATTTCAAGGCAGGGTCCCTTCACTGTTGTTCTGTT TGTCACTCTTGAACAAGTTAGAAAGCTCCTCAAGGAGTTTTAAATTTTGATAATTTGATTAATTACTTCATTCTTATTCA GATGATGATGATACATATTACTAGCTAGTTCTCTTTAGGGATTATTTGTTACTATGTTCCAAGATTTTGATAGTGTTCAC AATATTATTACATTGAATTAGTGAATATAGTTTACTATGTTCTCAAATTTTGGAAGATTAGCTTATTCAGATTCATATTT TCATTCA
CDS sequence (LotjaGi1g1v0348200.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGTCTCAAGGGATTCTTGGAAGGTGGTGTTGCTTCCATCGTTGCCGGAACCACCACTCACCCACTCGACCTCATCAA GGTTCGCATGCAGCTTCAGGGTGAGAATCTCCCGGCACACAATCTCCGGCCAGCTTTCGCCTTCCACTCACATTCAGCCA CCCTTCCTCCTCCTCCTCCGTCAGGACCCATCTCCGTCGGCGTCCGAATCATCAGAACGGAAGGCGCCGCCGCTCTCTTC TCCGGCGTCTCCGCCACCGTGCTCCGGCAGACTCTCTACTCCACCACCCGCATGGGTCTCTACGACGTCCTCAAGCAGAA ATGGAGCGACCCGGAGCGCGGCACCATGCCGCTCACAAGCAAGATCACGGCGGGACTTATCGCCGGAGGGATCGGCGCCG CCGTGGGGAACCCCGCGGATGTTGCGATGGTGCGTATGCAGGCTGATGGGAGACTCCCGGCGGCTCAGCGGCGGAATTAT AAGGGAGTTTTCGACGCGATCCGGCGGATGGCGGGGGAAGAGGGGATTGGTTCCCTGTGGCGCGGGTCAGGGCTTACGGT GAACCGCGCGATGATCGTGACGGCTTCTCAGCTGGCGTCGTACGACCAGTTCAAGGAGACACTTGTTGGGAAAGGGTGGA TGAACGATGGTATTGGGACCCACGTGGCGGCGAGCTTTGCGGCGGGGTTTGTGGCGGCGGTGGCGTCGAACCCGGTGGAT GTGATCAAAACTAGGGTTATGAACATGAAGGTGGAGGCTGGGGAGGCCCCACCCTACAATGGGGCATTGGATTGTGCACT CAAGACTGTCAAGGCTGAAGGACCATTGGCACTTTACAAGGGTTTCATCCCTACAATTTCAAGGCAGGGTCCCTTCACTG TTGTTCTGTTTGTCACTCTTGAACAAGTTAGAAAGCTCCTCAAGGAGTTTTAA
Protein sequence (LotjaGi1g1v0348200.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGLKGFLEGGVASIVAGTTTHPLDLIKVRMQLQGENLPAHNLRPAFAFHSHSATLPPPPPSGPISVGVRIIRTEGAAALF SGVSATVLRQTLYSTTRMGLYDVLKQKWSDPERGTMPLTSKITAGLIAGGIGAAVGNPADVAMVRMQADGRLPAAQRRNY KGVFDAIRRMAGEEGIGSLWRGSGLTVNRAMIVTASQLASYDQFKETLVGKGWMNDGIGTHVAASFAAGFVAAVASNPVD VIKTRVMNMKVEAGEAPPYNGALDCALKTVKAEGPLALYKGFIPTISRQGPFTVVLFVTLEQVRKLLKEF
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 310 | 310 | 5.4E-180 | – | |
| PANTHER | 1 | 310 | 310 | 5.4E-180 | – | |
| Gene3D | 4 | 310 | 307 | 4.4E-91 | ||
| ProSiteProfiles | 4 | 107 | 104 | 20.754 | ||
| SUPERFAMILY | 4 | 303 | 300 | 1.24E-77 | ||
| Pfam | 5 | 107 | 103 | 3.5E-17 | ||
| PRINTS | 14 | 26 | 13 | 7.1E-10 | ||
| PRINTS | 101 | 113 | 13 | 7.1E-10 | ||
| ProSiteProfiles | 116 | 207 | 92 | 25.903 | ||
| Pfam | 116 | 210 | 95 | 3.1E-18 | ||
| PRINTS | 170 | 187 | 18 | 7.1E-10 | ||
| PRINTS | 213 | 231 | 19 | 7.1E-10 | ||
| ProSiteProfiles | 216 | 306 | 91 | 26.439 | ||
| Pfam | 218 | 308 | 91 | 1.6E-19 | ||
| PRINTS | 295 | 310 | 16 | 7.1E-10 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Mitochondrial transport | Transport of substances into, out of or within a mitochondrion. | ||
| Cellular component | Mitochondrial membrane | Either of the lipid bilayers that surround the mitochondrion and form the mitochondrial envelope. |
Expression pattern of LotjaGi1g1v0348200.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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