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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0349200 |
| Transcript ID | LotjaGi1g1v0349200.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Serpin-like protein; TAIR: AT1G47710.1 Serine protease inhibitor (SERPIN) family protein; Swiss-Prot: sp|Q9S7T8|SPZX_ARATH Serpin-ZX; TrEMBL-Plants: tr|A0A059BKH6|A0A059BKH6_EUCGR Uncharacterized protein; Found in the gene: LotjaGi1g1v0349200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:81886381..81888259) extracted from Lotus japonicus Gifu genome v1.2.
CTCATTCTAATTGTCAAATCCTAATAATGGCCTCAATCGTTAACAATGGTTTGCAGCTACGATTACATTCCCGGGATCAA GGTTTCAAAGGTCATCACAATCTTCCACGAGTTTTCAAACCATCAAGAATTTCCATCCCGTCGCAACACCAATCAAAGGT TTGCAGAGCCATGGTTAACAAAGGTTTGCAGCTAGGAGGATTACATACCCAAAATCAAGGTTTAAGAGGTTTTCACAATT TTCCATCACAACTACTTGATGAAACCTTAACAAGCAATCAAACCGACGCTGCTCTCAACATCACAAAAAAACTATTATTG GAAGAAGAATTTAAGAACAAGAACGTGTTGTTTTCGCCATTGTCACTCCATGTCGTGCTTAGCACGCTCGCAGCGGGTTC AGACGGCCCCACGCTCAATGAGTTTCTCACCTTCCTCTGAGCCAAATCCACTGACCACCTCAACTCGTTCGCCTCTAAGG TCGCCTCCGTCGTACTTCGCAATGCTGCTCCCGGCGGTGGCCCTCACCTCTGTTTCAGTAATGGTGTGAGGGTCGAACAA TCCCTTCCTCTTGTCCCTTCCTACAAACAACTGGTGGCTACTGATTACAAGGCCACTTTTGCCTCTGTTGATTTCAAGAA CAAGGTCAGCAAATGCATTTTCTATTTTGGAGCTTCATAACCTAATTTTCCAACTGCCTTATAATTTTTATTTTGCATTC ATACTGCTTCCTAATTTGATCAATATCCATGAACATAGTCACACACTCCCAATTTTTAATCAAGCATGTATATGTGTTAA ATTGATAAACTGTAAACGATATGTATGTCAAACAAGTGCAGAAATTCCTTGTCACAATATCCGCCTTTATTTATTTGCAT AACTGATTATGATGATGGTTTCAAAGGCTCATGCAGTGGTCAATGAAGTTAATTTATGGGCCGAAGAAAAGACAAAAAGT CTTATCAAGAACATTCTTGATCCGATGGATGTTGATAACTTAACTAGGCTCATCCTTGCAAATGCTCCGTACTTCAAAGG TGCATGGGAAGAGCCGTTCGCTGCATCAAGGACGAGAGACCTTGATTTTCACCTTCTTAATGACACCTTAGTCAAGCTAG GCTCCCTTTCATGACCAGCAAGGAGGACCAAGTTATTGGTGTTTTTGATGGTTTCAAAGTGCTTAGACTCCCTTATGAGC AAGGTAATGGTGATCATCAATTCTCTATGTACATTTTCCTTCCAGATGCAAATGATGGACTATCAGCTCTCATTGAGCAA GTGGCTTATGAATCTGAGTTCGTGGAATGCCATCTCCCTTACCCTTACCGAGTAGTGAAAGTAGGTGACCTCTGGATTTC AAAATTTAAGATTTCTTCCCGACTTATCATTTCTGATGTGGTGAAGGGGATGGGATTGGTTTTGCCATTCTCCAAAGATT TTGCAGGTTTTACCAAAATTGTGGCTCCTCTGGATGAGCCTCCCCTATGCATTTCCAAAATAGTACAAAAGTCTTTTATT GAAGTGAATGAAGAAGGCACTGAAGCTGCAGCCGTGACTGTACTGGCTAAGGAGTCTATGGGTATGTGTAGTGCTTATTC AAAACTTATAGATTTTGAAGCCGATCATCCTTTTTCTTCTTGATTAGAGAAGATATTACTAGAACAATCCTCTTTACTGG ACAGGTGCTACATCCTCTTCAAGATTTCGTAGAATAACAGATAGTGATATGAATACTCTTTCGTGATTTTGTTATTCATT TTTATTGGTTACAATATTTTGATAGGACTTTAGTTACTTTGAATATGATCAAAGTAAGACATCTATCTATCTATCTTGAT CTATTTTTTGAATAATGGAGAAGTTTTTGCTATTGGAGG
CDS sequence (LotjaGi1g1v0349200.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGACCAGCAAGGAGGACCAAGTTATTGGTGTTTTTGATGGTTTCAAAGTGCTTAGACTCCCTTATGAGCAAGGTAATGG TGATCATCAATTCTCTATGTACATTTTCCTTCCAGATGCAAATGATGGACTATCAGCTCTCATTGAGCAAGTGGCTTATG AATCTGAGTTCGTGGAATGCCATCTCCCTTACCCTTACCGAGTAGTGAAAGTAGGTGACCTCTGGATTTCAAAATTTAAG ATTTCTTCCCGACTTATCATTTCTGATGTGGTGAAGGGGATGGGATTGGTTTTGCCATTCTCCAAAGATTTTGCAGGTTT TACCAAAATTGTGGCTCCTCTGGATGAGCCTCCCCTATGCATTTCCAAAATAGTACAAAAGTCTTTTATTGAAGTGAATG AAGAAGGCACTGAAGCTGCAGCCGTGACTGTACTGGCTAAGGAGTCTATGGGTATGTGTAGTGCTTATTCAAAACTTATA GATTTTGAAGCCGATCATCCTTTTTCTTCTTGA
Protein sequence (LotjaGi1g1v0349200.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MTSKEDQVIGVFDGFKVLRLPYEQGNGDHQFSMYIFLPDANDGLSALIEQVAYESEFVECHLPYPYRVVKVGDLWISKFK ISSRLIISDVVKGMGLVLPFSKDFAGFTKIVAPLDEPPLCISKIVQKSFIEVNEEGTEAAAVTVLAKESMGMCSAYSKLI DFEADHPFSS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 169 | 169 | 1.7E-46 | – | |
| PANTHER | 1 | 169 | 169 | 1.7E-46 | ||
| SUPERFAMILY | 1 | 168 | 168 | 1.11E-30 | ||
| Gene3D | 1 | 93 | 93 | 7.2E-20 | ||
| Pfam | 3 | 168 | 166 | 2.6E-28 | ||
| Gene3D | 108 | 151 | 44 | 2.0E-14 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Extracellular space | That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid. |
Expression pattern of LotjaGi1g1v0349200.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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