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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0351000 |
| Transcript ID | LotjaGi1g1v0351000.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Serpin-like protein; TAIR: AT1G47710.1 Serine protease inhibitor (SERPIN) family protein; Swiss-Prot: sp|Q9S7T8|SPZX_ARATH Serpin-ZX; TrEMBL-Plants: tr|I1JTG3|I1JTG3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0351000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:82198275..82199619) extracted from Lotus japonicus Gifu genome v1.2.
CTTGTAAATTAATAGGTAATAACTGATAGGACACGCGTTTCAAATTAAAAAAAATCGCTCATGCGAACTATAAGTATTTG ATGCATTTGTTATCCATGTCTCATTCTTATTCTTATTGTCAAATCCTAATAATGGACTCCATCAGAGTCAGAGGCATGGC TAACAAAGCTTTGCAGCTAGGAAAGCTATCAAATCAAACCGATGCTGCCCTCAGCATCACAAAGCATTTATTCTTGAAAG AACAATATCAGAACAAGAACATCGTGTTTTCGCCATTGTCCCTCCATGTCGCGCTTAGCATGGTTGCTGCGGGTTCAGAC GGCCCCACGCTCGATCAGTTTCTCACCTTCCTTCGAGCCGAATCCATCGACCACCTCAACTCCTACGCCTCTAAGCTCGC CTCCGATGTGCTCCACGATGCAGCTTCCACCGACGGCCCTACCCTTGGTTTTGCTAACGGTGTGTGGGTTGAACAATCCC TTCCTCTTATCCCTTCCTTCAAACAACTGGTGGCCGCTGATTACAATGCAATTTTTGCCTCTGTTGATTTCAAGAACAAG GTGACTCAAATGCATTTTCTATTCTGGGGCTTCATAACCTATTTTTCCAACTGCCTTATGATTTTGATTTTGCATTCTTA ATTAGATCCTTGTCTAGTAAATTAATTAGAATGAGGATTGTGTCTGATTGTTTAAAAGCTGTATGTATTTGCAGTTGTGT ACTGCTTCCACACACCATAGTCACACACTTGCTCACTGCCAAATTTTAATCTATTCAAGCAGATTCATGTATGTTACACT GATCAATATGTTCCTTGCTACAATATCTTCGTTGTTGATACAGTATAAATATGTTTGTTTTGTAACTGTATATGAGGAAA AGAATCAGAACCTTATTTGCGTAACTGATTTTAAATATGATGATGGTTTTACAGGCGGATGAAGTGGTCAATGAAATTAA TTTATGGGCTGAAGAAAAGACAAATGGCCTTATCAAAGACCTTCTTCCTCGCAGCTCAGTTGACAACTTAACTAGGCTCA TCCTTGCAAATGCTATGTACTTCAAAGGTGGATGGGAAGAGGAGTTTGATCCATTTAGGACGAGAGACCGTGACTTTTAC CTTCTTAATGGCACCCCAGTCAATGTTCCTTTTGTAACACCCCAATTTCTCAACTGAGGAGTCACATTAGTAACCTAACA AAGTCTAAGGACCAATCTGCAATCCCTAAAAACCAAGGGAATTTTTTTTCCGTAAAACAACTAAACACTTCGGCTAAAAG GTTGGAAACATACCATAACTTTATTTAGATAACTTGTTTCCCGATATACAGTAATAATAGTTTAC
CDS sequence (LotjaGi1g1v0351000.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCATTTGTTATCCATGTCTCATTCTTATTCTTATTGTCAAATCCTAATAATGGACTCCATCAGAGTCAGAGGCATGGC TAACAAAGCTTTGCAGCTAGGAAAGCTATCAAATCAAACCGATGCTGCCCTCAGCATCACAAAGCATTTATTCTTGAAAG AACAATATCAGAACAAGAACATCGTGTTTTCGCCATTGTCCCTCCATGTCGCGCTTAGCATGGTTGCTGCGGGTTCAGAC GGCCCCACGCTCGATCAGTTTCTCACCTTCCTTCGAGCCGAATCCATCGACCACCTCAACTCCTACGCCTCTAAGCTCGC CTCCGATGTGCTCCACGATGCAGCTTCCACCGACGGCCCTACCCTTGGTTTTGCTAACGGTGTGTGGGTTGAACAATCCC TTCCTCTTATCCCTTCCTTCAAACAACTGGTGGCCGCTGATTACAATGCAATTTTTGCCTCTGTTGATTTCAAGAACAAG GCGGATGAAGTGGTCAATGAAATTAATTTATGGGCTGAAGAAAAGACAAATGGCCTTATCAAAGACCTTCTTCCTCGCAG CTCAGTTGACAACTTAACTAGGCTCATCCTTGCAAATGCTATGTACTTCAAAGGTGGATGGGAAGAGGAGTTTGATCCAT TTAGGACGAGAGACCGTGACTTTTACCTTCTTAATGGCACCCCAGTCAATGTTCCTTTTGTAACACCCCAATTTCTCAAC TGA
Protein sequence (LotjaGi1g1v0351000.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MHLLSMSHSYSYCQILIMDSIRVRGMANKALQLGKLSNQTDAALSITKHLFLKEQYQNKNIVFSPLSLHVALSMVAAGSD GPTLDQFLTFLRAESIDHLNSYASKLASDVLHDAASTDGPTLGFANGVWVEQSLPLIPSFKQLVAADYNAIFASVDFKNK ADEVVNEINLWAEEKTNGLIKDLLPRSSVDNLTRLILANAMYFKGGWEEEFDPFRTRDRDFYLLNGTPVNVPFVTPQFLN
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 32 | 237 | 206 | 2.2E-64 | ||
| SUPERFAMILY | 36 | 234 | 199 | 1.44E-54 | ||
| PANTHER | 37 | 236 | 200 | 6.4E-73 | – | |
| PANTHER | 37 | 236 | 200 | 6.4E-73 | ||
| Pfam | 39 | 234 | 196 | 2.3E-50 | ||
| SMART | 44 | 240 | 197 | 8.7E-5 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Extracellular space | That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid. |
Expression pattern of LotjaGi1g1v0351000.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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