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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0361400 |
| Transcript ID | LotjaGi1g1v0361400.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Interferon-related developmental regulator 1; TAIR: AT1G27760.3 interferon-related developmental regulator family protein / IFRD protein family; Swiss-Prot: sp|Q5S1U6|IFRD1_PIG Interferon-related developmental regulator 1; TrEMBL-Plants: tr|A0A1J7HQ49|A0A1J7HQ49_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0361400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:83619966..83624782) extracted from Lotus japonicus Gifu genome v1.2.
AAAATTATTATTTCCGTGCTTCTTCTTCTCAATATAAAACCAAAGCCTCAAATTTAGGGTTCCAGTTCTACCTATTTCAG ATAACAAAATCCCAATTCGATTTCACAATCCCGATCCCAAATCGTTCTCTGTAGAATTTTCATGGATTTTTCATCATCTG AATCTGAATCTGAATCTGAATCAAACCAAGTGTTGTCGCTAATCCCCTTTTTCTTCCCGATTTCTATACCCTTCGATTCT GCTTCTTCCTGTCGCATACTTCTTCATACTTGTTCAATTTCGTCTCTCTCTTCCTCAATTTCTGATTCGTGTTTCTAACA ACGCTCATAACATTGTTAGTCCTAACCCAGTGTTTACATAACCTCGCAATTCGCCATGGGAAAACGTAAGCTCGAAACCC TCTTGCTTCCTCTTCATGAATCTCAGCTGAATTACTGTTTGTTTTCAATTTCTCATTGTTTTTATGCTATGTTTAGGTAA TTCTCAACGGAAAGGTGCTGCTGCAGTGTTTGATACCGATGATGATAGTAGTGTGACTTCCTCATCAACTTCAAATTCTG ATCTGGTCTCGGTGTCTGGTACCGAAGATGTGCAGTTAGAACAGGATTCATTGCTTGACCAAGCTCTCGATGCTCTAGAT GAAAAAAGGTACTTACTTTGCTTGCTATCTTAATGGGAATGGAAGGTGGAATGAAACTCAAGTTTTTTGTTTTGTTTGGA ATTGATAAAAGGGGTTCTACGAGGGAGAAAGCTTTCTTAGCCATCATTGACGCCTTCAAAACCAACTTGCAGCATCAGTT TGTGGAAAAGAAGTAAGCTTCTATCATTTAATCTTTCAACTTTTTAGTGAGCAATGGTTTCTTCTTTCATATATTGCAAA AGAAAAAAATAAGTCATGATTTATATCAGTGTGCTTGGTCAATTAATGTGTATCATGAAATATGATCAACCTATCTAGAT TCTAGAGTATCATGTTATCAACGAGTCAACCAAACCAAAAATATATATAGTTTTTCCTATTATGATCATTGTATTTTATA GGTTTACTGCTAGCACTATTTTTAGAATGATTTCCAATTTCAATTCAGCTGACTGTGTATATATGATGATGGATACATAT GAGTTTCTCTCAAAAATGTGTTATTGTTACATAACATTGAGGTTCTTTACTTTATCAGATTTGCCACCATATTACATCAA TGTCTTGCTTCAATCAAAAAGGGACCCAAGAAGGCTTCTGCCACGGAGATAGCTTTCGCATCTCGTGCCATTGGTAAGCT TTGAAGTAACTTACACGTGTTTTGTATTATTGTGTTCATTTCATTGAATATCTAATTTTGTTCCCTTTCAGGTTGTTTGG CCTTGACTGTTGGTTGTGGTGATCATGCACGTGAGATATTCGAAGAATCGGTTCGTCCTTTGGATGAAGCACTTGTTTCT TCAAAAATATCAGCAGTAAGTAAAAGCTTAGAAATATTGCAAAGTCATTACTCAATTTTTTCCTAGTGATTCTTTACTGT CTCTGTCTAGTTGATACTGAATTGTATATGCTCAATGCCATTTATGTGTAGTTGCTGGAGTGCTTGGCTATAATCACCTT TGTTGGAGGGAATGATCAGGAAGAAACAGAGCGATCTTTGGATATATTGTGGCGAGTGATCCATCCCAAATTAGGTTCCA ATGTATGACTCTGTTTGAAATTTACTAAGTTGTTTTATTCTGATAATATTACTTAATTGCACGTTCTGTGTTTACACTCT AGTCGTAAAATAACATTTCCCATTTTCCGGATTGTTGTGCCCAATTTTCTTGCTTAGATTGACTGCTTCTATTGTTCACT TTTTAGGTAGTTGCAGCCAAACCTTCTGCTCCATTAATAACCGCTGTGGTGTCTTCCTGGTCTTTTCTCCTGTCTACTAT GAGCAATTTGAAGCTGAATTCAAAATTTTGGCAAAAGTAAGAACAGTCTATTCTTTTTCATCCATTTTCATTTCATTCTG AACTAGTTTAGTTAGGTAATATGCAACATGCATTCATGCAACTTGGAAGAGGCTTGCAATAGCTAGATTATTTTGCTCAT TTAATGCCATAGATGACGAAGGACCATTGTTTGCAGGAACCCTAAATTGCATTCCATTGAAATATCGACTGCTGAAAATT GTTACCCATACTAGCTGAATTGGAATATTCTAAAATTTTTATGTTTAAATTTGAGTGAGAACATATCAAACCGATAATCT AATGACTTTAAAACTAAAATTTGGTAGTTGGAGATGTACCAACCCTTACAGAAATTGCTATCCTAAATTCCTAATAGTGT TTGCCCTTTCTTTCAATTAAGGAAAAAATTATGTGCTGTATTTGATATATTTCAAAGTGTGTCAGTTATAATTATATTAT TCAGTATTACATTTATATCAGCTATAATTTTATGTTTCCTTACTTATTTTCGGTAATTTTAAGGTAGATATAGTGGTTAG AATTAGAGCCATGGTAGGATATTCTATGGGCCAGGATTAATTACTTATAACATGTTTTATTAGCATATTTTTTCCTCAAC ATCAATTTTGACATCCACAAGCCCCATATTACATCTTGGCTATTTTGCTTGGGGGTACAGTTTATACCCGTGCCTATACT ATATTATTATTACTACATACAGAACCATATTCCATTTCTCTTAGCCTCAGATCTTACTTATCGATTTTATTGTTGATGCA GTTCAATATCTTATTTATCTGGTCTTCTAGACAAGGAAGATAGGTCAGTACGAATTGCTGCTGGTGAAGCCCTGGCTCTA ATTTTTGAGATTGGAGTTACTGAGAAGTTTTCCGCTGTGTCTAATGGTGCAAGTGATACAACTCAAGACGAGAGTAAACC TCAGGAAAGTTACATATTTTTACAAGGATTAAAAGGAAAGGTGATTAATCAATGCAAAAACCTGTCTGTGGAGGCTGGTG GAAAAGGTTCTGCTAAAAAAGATCTTAATACTCAAAGGAACCTGTTCAAAGATATTTTGGATTTTTTCGAGGTATGTTAG TAGTTACTATTTTCCTTCTTGTCATCATCATCTTTTGAAAATAAATATATGATACTCGTGAGTCAAAGGCTTCTGTACTG ATCTTGGCTTACCTTGTGATACTAGTATGGTTACTCTCCTGAAATTACTACAAAGATTGGTGGTGATTCGTTGCAGACAT CGTCATGGTCGCAAATGATACAGGTATTTTCTTGTATTCTTTCATATATACCTATGCAGTCAGAAGTAGTATTCTGACAT CCAAATTCTTGCAGTTGAACTATATCAAGCACTTCCTTGGAGGAGGATTCATCAAGCATATGCAGGTTTGCTTTCTCATG CATTTTCTTTGTCAAGCTTTATAGTTGTTGTGAAAAGTTTTTAACATTGAGGTTATTCTTCCCCCTTGTCTTTCCCTCTT TTCTGTTGGGAAATTAGGAAAATGAATTCCTGCATGATGTCTTTAGTTTCACACCAAAGAAAAAGCATCTCAGTAACAAC GAACACAGAATGTCTGGTGAGGAGAAGGTAAGTCTATCCAAGTGCTTGAGCTCAGTTATCTCGTGATTTTGTTATGGACT TGGACTCTATAGGTTCACTACTCCCAGTCGCTACTTTTTCTTCATTCACTTGCTATCATCTGCTGACCAGTCCCATTCTT TCACCTGCAGAGAATGTTCAAGTCTCCAAATTCGTTTTTGAACAAGGCTAGGACCCAATTACTCAATAAGCAGCGGTTAA TGTCTGAGGTTAGCATTCTTACCATATAAAAGAGCGTTCCATTTAATCTTCCTGTTGAAATAATTAATGGATAACAGGGT ACTTAAATACAATCTGAAATCTGTTAATTATGATAATCTTTGCTGCAAAAACTAATGTTAGAAAAGACCACCCTTGACTT CTTTGACTCTCTAGCTGAGGTTGAGTTGCATTGGTGTTTTGTCCAATACCTCTGTTTAATTCTGAATTGCCGTTTATGCA ATCAGCTAATTGATTTTCTGTTGTTGAAATCACAGGGCAGAAACTTCGGTCACTACTCGGCCAGTATGGTTAACGAGGAG CAATGAATTTGAGTCGCAACAACAAAAATGTTTCGTTTGGTTTCAAACATTCATTTAGTAGTGTCCCTTATTTATCAAAA TAATGTCTCAAACTTTATGTGTATTACCCACTGTTGCTCTTGCCTATTGGCAATCAATAAACTGAGAGCAACTTGTATGA TTAAAACATTCATTCTTAAATTATTTGGAATATCAATGCATTTACAATATGATAAAACGTGAATCTTGACTTCATTTAAC GTGTATAGAACTTCCTACCTCATGGTCCACGTGCCTCACCTTGTTGCTACATCGTAAATAGTATCTCTAATGAAACTTGA TGCTTCTTTAGATTCATTGTAACCCATCGGAGTCCACTCACCATAAATGAGACCCCATGTTTAGGCCTAAAATGAGACTC AGTGTTAAATGAATCAACTAATGAATCAAGGGAACATTATAGGCTCCATCTCCATGCAGCTCTCACAGGTACTTCTGAAA GGCATGCAATTAGTGCAATTGCTAGCTGATTTGTAACCAAAATCTTTTTCTCGTCTACTACTTGTAAATCCCAACCTGTA GCACAAAGATGCTACTTTGCTTAACTAGATACACATACTTTTCATCAATGAAATGTTAAAACCTACAGGAAATAGTAGCA GTCCTCAAGTTCTGATTTAAGTTAGGATTCTATGAATGATTGTTGGCTGGCTGTTAGGCTTCTTGATTGCCATTTATAGC CTTGGTTTTTAGGTGTG
CDS sequence (LotjaGi1g1v0361400.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGAAAACGTAATTCTCAACGGAAAGGTGCTGCTGCAGTGTTTGATACCGATGATGATAGTAGTGTGACTTCCTCATC AACTTCAAATTCTGATCTGGTCTCGGTGTCTGGTACCGAAGATGTGCAGTTAGAACAGGATTCATTGCTTGACCAAGCTC TCGATGCTCTAGATGAAAAAAGGGGTTCTACGAGGGAGAAAGCTTTCTTAGCCATCATTGACGCCTTCAAAACCAACTTG CAGCATCAGTTTGTGGAAAAGAAATTTGCCACCATATTACATCAATGTCTTGCTTCAATCAAAAAGGGACCCAAGAAGGC TTCTGCCACGGAGATAGCTTTCGCATCTCGTGCCATTGGTTGTTTGGCCTTGACTGTTGGTTGTGGTGATCATGCACGTG AGATATTCGAAGAATCGGTTCGTCCTTTGGATGAAGCACTTGTTTCTTCAAAAATATCAGCATTGCTGGAGTGCTTGGCT ATAATCACCTTTGTTGGAGGGAATGATCAGGAAGAAACAGAGCGATCTTTGGATATATTGTGGCGAGTGATCCATCCCAA ATTAGGTTCCAATGTAGTTGCAGCCAAACCTTCTGCTCCATTAATAACCGCTGTGGTGTCTTCCTGGTCTTTTCTCCTGT CTACTATGAGCAATTTGAAGCTGAATTCAAAATTTTGGCAAAATTCAATATCTTATTTATCTGGTCTTCTAGACAAGGAA GATAGGTCAGTACGAATTGCTGCTGGTGAAGCCCTGGCTCTAATTTTTGAGATTGGAGTTACTGAGAAGTTTTCCGCTGT GTCTAATGGTGCAAGTGATACAACTCAAGACGAGAGTAAACCTCAGGAAAGTTACATATTTTTACAAGGATTAAAAGGAA AGGTGATTAATCAATGCAAAAACCTGTCTGTGGAGGCTGGTGGAAAAGGTTCTGCTAAAAAAGATCTTAATACTCAAAGG AACCTGTTCAAAGATATTTTGGATTTTTTCGAGTATGGTTACTCTCCTGAAATTACTACAAAGATTGGTGGTGATTCGTT GCAGACATCGTCATGGTCGCAAATGATACAGTTGAACTATATCAAGCACTTCCTTGGAGGAGGATTCATCAAGCATATGC AGGAAAATGAATTCCTGCATGATGTCTTTAGTTTCACACCAAAGAAAAAGCATCTCAGTAACAACGAACACAGAATGTCT GGTGAGGAGAAGAGAATGTTCAAGTCTCCAAATTCGTTTTTGAACAAGGCTAGGACCCAATTACTCAATAAGCAGCGGTT AATGTCTGAGGGCAGAAACTTCGGTCACTACTCGGCCAGTATGGTTAACGAGGAGCAATGA
Protein sequence (LotjaGi1g1v0361400.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGKRNSQRKGAAAVFDTDDDSSVTSSSTSNSDLVSVSGTEDVQLEQDSLLDQALDALDEKRGSTREKAFLAIIDAFKTNL QHQFVEKKFATILHQCLASIKKGPKKASATEIAFASRAIGCLALTVGCGDHAREIFEESVRPLDEALVSSKISALLECLA IITFVGGNDQEETERSLDILWRVIHPKLGSNVVAAKPSAPLITAVVSSWSFLLSTMSNLKLNSKFWQNSISYLSGLLDKE DRSVRIAAGEALALIFEIGVTEKFSAVSNGASDTTQDESKPQESYIFLQGLKGKVINQCKNLSVEAGGKGSAKKDLNTQR NLFKDILDFFEYGYSPEITTKIGGDSLQTSSWSQMIQLNYIKHFLGGGFIKHMQENEFLHDVFSFTPKKKHLSNNEHRMS GEEKRMFKSPNSFLNKARTQLLNKQRLMSEGRNFGHYSASMVNEEQ
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 39 | 39 | - | – | |
| PANTHER | 1 | 439 | 439 | 6.2E-187 | – | |
| PANTHER | 1 | 439 | 439 | 6.2E-187 | ||
| MobiDBLite | 18 | 39 | 22 | - | – | |
| Pfam | 18 | 331 | 314 | 1.2E-77 | ||
| SUPERFAMILY | 34 | 280 | 247 | 2.23E-8 | ||
| Pfam | 376 | 426 | 51 | 2.4E-16 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi1g1v0361400.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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