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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0362700 |
| Transcript ID | LotjaGi1g1v0362700.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | BSD domain protein; TAIR: AT1G10720.1 BSD domain-containing protein; TrEMBL-Plants: tr|A0A072VCG3|A0A072VCG3_MEDTR BSD domain protein; Found in the gene: LotjaGi1g1v0362700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:83781865..83788088) extracted from Lotus japonicus Gifu genome v1.2.
GGAGAATAAAATTGAACTGGTGATTATTGTTGGGAAATAAGTAAATTATTCAAAGAGAGTAACATTTAACTGACCTCCGC ATCAAGCAGCACCAAACTCATTGCATATAGTTTGGATGGTTCAGTAACTGGGCACATGTCCCATGCTCCAAGGACCCTTA GTTTAATCGTCCATGTATCCCTCCCGCTGCATAGAGCTTCAAAGGGCTGTCAGTTCCAGCTGGAATAAGACATTGTGTAG ATAAGGCAACTCCCAAACTCAAAAGATTTCTCAACACAAATGCAAAACCAAAAAAATGTGAGTAACCCTTACCATGAAGT GCCTATTTATAAAGAGTAACATTTGTAGATGAGGAAGAGAGCAAGGCAGCTTCTACAAAGCTTGATAACCTATAAGAGAT GGACTAAAGGAACTTGTACTGGAAAAAAACACACCAGGAACAGCAACACCGCAGTGAAAAATGATAATAGAAAATAAGAT TAAAAATTGAAAGAAAACCAAAGCTGTAAAGGAAAATGGAGGAGATAAGGTGTAGGCAAACAACCTGTAAAGAAGAACGT CCAGCTGGTTTTGGTGGCTTGAAGGTACCTACGGATTGCTACACACGCAAGCTGCTAGGTAAAAAGCCATGAAAACCGGA AGGAGGATGAGGGCTACTACATGAACAACGAAAAGTACAGCATGAACAGAAGTAGAAGGGATGATCGAGGTGGGATCGAC CTTCGATGCACCAACACGGCAACAGCTGGAATTGGGATGACGCAATTGTGTGACAACATGGGTTGAGAAGTAAAAGAAGG AGAAGTAGAGAAGGATCACAGAGGGGAGAGGAAACGGCTGCTGATGACGGAATTGTGTCGAAAGAAGGAGGAAACGGCTG CTGATCACAGTTGGGCATGATGCAATTGTGACAACATGGGCCATCATCCACATGGGCCATTGGAAAAAGAAGTTGTCCCA AAAAAAAATGCCCCGTGAACAGTAACCAGGATTAGGAAATTAAGGGTAGAAGATGAACCAATGAATAGCCCAATACAGAA TCACATGAAACAATAAAGAAAATGGACCAATGAGTAGCTCAATAGAGATTCATGTCCCACACGTGCCTGAATATATTTCA TTTGTCTTATCTGTACTGTATGTCTGTATCTGTATGTTACCCATCTGTTCCGGTTCGGCGAGTGGTTAAAACTATACACC CACCGTAGTCCATAACCCACCTGATCCCCACCCACCACCTCCCCTCTTTCACTTTACCAATCGATAAACCTTTCTCCGGT CACATTCCACGGATCCCCCATTTTTTTTTTCTTTAAAAAAACGGGGGAAAATGTCTTCGTGGCTTGCCCGTTCCCTGAAA AACTCTCTCCGCCTCGACGACGACGGAGACGACCAAATCGCCGCCGCACCGGATTCACCAACCGGGACCCACCCGCAACA CCAACAACAGATTCAACCACCGCAAGAGAATGATAATAATAATGCAGTTAGATCAGAAGAAGATGAAGAAGAAGAAGAAG ACGATGAAACGCATGGGCGTGGTGGTGTTAAAGAGGACCTCGACGAGATCAAGCAAACCCTAACCCGTCAATTCTGGGGA ATGGCCTCCTTCCTCGCCCCGCCGCCACCACCACCTTCCCAATCCGATCGCGCCGCACCTTTCTTTTCCGATCACTCTCT TTCCGGCGGTGCAAACGAAGAACAACAATTGGATCATGGAGGTAATCGTAATCCTGATGATGATGATGATGATGAGGAGG AGGAGGAGGAGGAGGAGGATGCGAATTCTGATCAATCTTCGGTGGTGGAACGAGGAGACGATGACCTCCGCACGGATGAT CCTGACCGGAATTCGATTCCGTCCGGATCCGATTCGGAAGGGAACCAGGAACCGGAAATTGACATCGAAAACGCGGTTGG AATCACGGAGGAGGTGTTGACTTTCGCTATGAATATCGCTATGCATCCTGAGACGTGGTTGGATTTTCCAATTGATGAGG AAGAAGACACCGACGGTGAGTCTTCTACACTAATTGGAATTGGAATGAAGCAAATTTCATTTCGTTTCTGTACTGGATTG GATCACGAATGATGATTGATTATTTACACGCATTTCAATTTGAATTTGCCTCTGCTGAATGTGAATTATAATAATTATAG CTTGTTATACATGCCTGCATAGCTTAGCCTTCATGATAGGTTAGTGTTAACATGGTTATCTATTCATGCTTCAATTTGCC TAATGGTTAATTTTGTTTGTATGCTGTAGATTTCGACATGTCCGAAGCCCAACAAGAGCATGCTGCGGTTATTGAAAGGC TTGCTCCGAGATTAGCTGCGCTCAGGATTGAACTGTGTCCTTGCCATATGAGTGAGGGTTACTTCTGGAAAGTCTATTTC GTGCTCTTGCATTCAAGGCTTAATAAACAAGATACTGACATTTTGTCTACACCCCAGGTCAGATACGTGGCAATTTGCTT TGCTTTTCATATCGCACTTGTAATCTGTCTCTTTAGGGATCTTGTTGATTAGTTTTATACATTTATCATTGCCTGAATCT TTTAGACTAGAAATGATTGTTCTAGGATCTTTATTTGATATATGAGCTAGCTCACAGTTACAGGTTAGAGATTGTTGGTT TTCAACATTATTGATAATCTAGAGGGAGGGAGAGAAATCAGAGCAACTGAGTTTTGAAAGAAGAGAAAGTTTCCTGAGTT TTCATTCATTCCTTTCTGACGGTTACACAATTACACTTACATCAGTATTTATATTACACTCAAGCTTACTGAGTGAGCTG TTAAATGCAGCAGAGTCTCAGCTAAGCCCTTGCAGATTCTCTAACTGCAAACCAAGTATGGCAAATTAGATAACTATTTT TTTGGATAGGCAAAATGAGATTAATGGGGAGCACAAGGGGTACCCAACCCACCCACCCATTACAAGAGGAAAGTGATACA GAAATCAACAATTAAAACACTGTTACAGAAAAGTAGATGTTGTAGCAGGAAAATAGCACACTCCCCAAAAGACAAGCTAA GCTACCCCCAAGACTACCCCCAACAGAGCCAAAGTCCCTCTCCATTGCTCGTTGCCAAATTGGTGATGTTTCCTTCTCCT AATTCCGCTGAGCTTGACCTCTGAACCCCTTCACTGCATATTAGATAACTAACTGACAATCTTTCAGAACCTATCGAGTG AATCGATATACTCTATCAAATGTTATCTTCTGGGATTTACATGGAAAGAGTAATTCATTATGTCTAACTGAGACTGCAAT ATGAAGTTCTCTCAAGTGTGGGGGGAGATGGGAATATTTGTAAAATATAAGTAATAAGTAATCAATCAATATAAGTAATA AAAATGCAGAAAGACTCGTATGGAGTGCAATAGTCACCTAACCACTGTAGTTATTCTCTTAATTCATGCTGTGCAGTACA CAACTTTCTATTTTGTGGACTTTGATAATTTGAGCTGAAACTCTTATATGTTGAAAACAGTGCAATGTCCTTCTTAGTGG TACAAATATATTTTATTCGAGAATTTCTACAAGTTAGGATATTTTAGTTCATACTTTCGGATTGTTGAGGACTTGGGGTA GATTCTATGCTGTAAAACTATTTCGCCTGATTACATTTTATATTGTTTTAAATTTAAAATTTTATTTAAGCACTGAAAAA TCGATTTATTTCTCATTGTCTGCATGCGCATGCTTCCGAAATTCTTCATCCATCGGCCCTGTGCCATTTTCTCCAAAAAT ACTCTTGCGCCAAGGTACTACACGAAACTTGATTTAATCACATCAGGATGAGGGACGACCTCTGCAATATTAGATTCATC GACCTCACGTTTTTTCCAGCTAGAAACACGACACACACGCTCAACCTGTAATTAATGTTCGTACACCACGTATTTTGGAT AGAATTGAGAAGCGATGCTCGGTTTAATCACGTCACATTGCTTTTCAATTCTGTCAAAAATACGTGGTATACAGACTTAG ATAAACTAAAGAGGAATCTCCGGTGGACAGTACGCACGAACAGCGGCAGGTGCGGTAGAGGGCTAGAGGCAAAGAGAAAG GGCTGTGGTGCGTGACGGTGGCTGGCGGAATTGAGATCTGGCAGGTCGGACCAATTGTTAGGATGCAAAAAATCCTAACA GTGAAACGATAGAGAAAATAGGATAAAAGGAAATATTTTTGGTATTTTTCTTATTAAAACTGGAAAATAAGATAAATAAG AGGTTGCCGTTGGTTCCTCCAATAGGGCTGGTTCCCTTAGATCTCAATAATTCAATTCCTAAGGAGGGTACTCATATACT AGTAGAATAAAAGATAACCTCCTAAAAAGTACTATAATTCTGAAAGATAACCCAACCCAAAAACAGAAGATCTCCAAAGA TAGACTCTTAAATTAAAAGATAGATCCCTAAATTAAAATAAATCTAAATCCTTAATAATTAGATCCTAACAATTTCTCTA TTATGTGAAGATATTATCACTGATGTTATTATCCATTTGTTTATGGTTAATATGGTGGCACATATTTTTAGTGTTGTAGT ACAAGGGGATGTATCTTATGAGAATGATCATTTTAGATGAGAACATAGAAATAAATCATGATCGTTAGATCTGATCATGA ATGATCAATATTAAAACAATTTAATAGTCATGTGATAGTGATCACTTAAAAATGTCATGTGACTCTAATGTTTGTGTCTG AAGTTTGTCTCTGATGTTCGTGTCTGAAGTTTACCTTCACTTCTACATTCAGCTATTACATCAACAATAATGGGTCGATG AAATCATCTAATGTAATAGTTTTAACTCTTGCAGGTCAGGGAAGCCAGAGCAATGTGGATGAAGGAATTGCATAAACAAA TGAAGCCAGAATTTGAAATTTTTGGAAGAAATTCTTTCTACTTGAAGGACAGTGTTCAACCTGATGATTTTTCTCCTAGA TTAGTAGATGACACCTGTTCTGATGACACGCCTCATCGGACTTATGGATCTGAAACAACAACTTCTTCGTCCATGATGGC AGATAACGAGATTGAGAAATATCCGGTTGAAAGTTCTGGAACACATTTCATCGATAAATCAGTTACTGAGGAAAATATTG TTAAAACTGAAAACAAGGATCTAAGAAGTGGTGGGCCATCTCATATGATTATTCAGGACTATGGTGGTGATGATGACAAC GAATGGCCAGAGGAAGATTCTGATTTAGGAGGATATGTTGGAACCAGTCTCCCCTTGTTGAATGAAGAAGACATATCTTT CAGTGATCTCGAGGATGATGATTATGATATTAAACATGTTAGTTCCAATACAGGTTCAAAGCTGGTATGAACTTCAATCT AGATGACACGATTATGGTGATTTTCGGGGCATTAAATCCTCACTCTGAACTACGAACCTGATGTTTGGAAAAAACAAACA AGGATAATTGGGGTCTGGCTTCTGGAGCATTTTTTCTGTACATAATGAAATGTTGAACGAAGTTGTGAAAATGCCATGAT GCTATTTGAGGCTGTATAACGAACTTCTTCATCTCTTCTCAAGATTAGGTGGGTTCTGAGGTGATGTTGTCTTCAGAAAT AACTCAAATGAAAAGGAAAGAGTGGAGCTAAGACAGCTATTTGATGTTTTGATCCGTATTTTTCAGGGATCCCATACGAG AACGTGGGATGAAATTATATGCTTAAATCTCAGGTTGAGCTCTGTTTCAGAAGATATGTCATATAGGGGGAACAAGTGCA AGTGTATATAAACTATTAAAATGTCTTGTTTGTCGTCAAAATATAGATTTTGAATTTTCTCAGGATTCTTGAGGTGGATG TACTAGTGGGTTTGGGGTGCTCCAATTTTATTCTTTTTTGGTGTTGGCCTCCTGATTGCCTTGTTGTCAAACTGTGTTTG AAAACAATGACTAGATTATTTCATTTATTTGGATTGTGATCGACTGATATTCCTGTCAGTATAAACATCTTCACCATTAT CCTCTTGGTCTCAAGGCTTAGGTTAGAAAAGAGGCCTGCTCTGGTTTTTACAATGAGCTACATTCTAATGTGTGAATGTT TTACATTTTTGGGAGGCTTAAAACAGCTATCCTATTTGGTTACTTGTGGATGTCCGCAATTGATTCTTTCTGTAATAGGC TACTGTTGAGCTTAGTGTGTTTGGTTCCGTCTTGGAACCTTGAATCAATTCAATTGGCAGAATC
CDS sequence (LotjaGi1g1v0362700.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTCTTCGTGGCTTGCCCGTTCCCTGAAAAACTCTCTCCGCCTCGACGACGACGGAGACGACCAAATCGCCGCCGCACC GGATTCACCAACCGGGACCCACCCGCAACACCAACAACAGATTCAACCACCGCAAGAGAATGATAATAATAATGCAGTTA GATCAGAAGAAGATGAAGAAGAAGAAGAAGACGATGAAACGCATGGGCGTGGTGGTGTTAAAGAGGACCTCGACGAGATC AAGCAAACCCTAACCCGTCAATTCTGGGGAATGGCCTCCTTCCTCGCCCCGCCGCCACCACCACCTTCCCAATCCGATCG CGCCGCACCTTTCTTTTCCGATCACTCTCTTTCCGGCGGTGCAAACGAAGAACAACAATTGGATCATGGAGGTAATCGTA ATCCTGATGATGATGATGATGATGAGGAGGAGGAGGAGGAGGAGGAGGATGCGAATTCTGATCAATCTTCGGTGGTGGAA CGAGGAGACGATGACCTCCGCACGGATGATCCTGACCGGAATTCGATTCCGTCCGGATCCGATTCGGAAGGGAACCAGGA ACCGGAAATTGACATCGAAAACGCGGTTGGAATCACGGAGGAGGTGTTGACTTTCGCTATGAATATCGCTATGCATCCTG AGACGTGGTTGGATTTTCCAATTGATGAGGAAGAAGACACCGACGATTTCGACATGTCCGAAGCCCAACAAGAGCATGCT GCGGTTATTGAAAGGCTTGCTCCGAGATTAGCTGCGCTCAGGATTGAACTGTGTCCTTGCCATATGAGTGAGGGTTACTT CTGGAAAGTCTATTTCGTGCTCTTGCATTCAAGGCTTAATAAACAAGATACTGACATTTTGTCTACACCCCAGGTCAGGG AAGCCAGAGCAATGTGGATGAAGGAATTGCATAAACAAATGAAGCCAGAATTTGAAATTTTTGGAAGAAATTCTTTCTAC TTGAAGGACAGTGTTCAACCTGATGATTTTTCTCCTAGATTAGTAGATGACACCTGTTCTGATGACACGCCTCATCGGAC TTATGGATCTGAAACAACAACTTCTTCGTCCATGATGGCAGATAACGAGATTGAGAAATATCCGGTTGAAAGTTCTGGAA CACATTTCATCGATAAATCAGTTACTGAGGAAAATATTGTTAAAACTGAAAACAAGGATCTAAGAAGTGGTGGGCCATCT CATATGATTATTCAGGACTATGGTGGTGATGATGACAACGAATGGCCAGAGGAAGATTCTGATTTAGGAGGATATGTTGG AACCAGTCTCCCCTTGTTGAATGAAGAAGACATATCTTTCAGTGATCTCGAGGATGATGATTATGATATTAAACATGTTA GTTCCAATACAGGTTCAAAGCTGGTATGA
Protein sequence (LotjaGi1g1v0362700.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSSWLARSLKNSLRLDDDGDDQIAAAPDSPTGTHPQHQQQIQPPQENDNNNAVRSEEDEEEEEDDETHGRGGVKEDLDEI KQTLTRQFWGMASFLAPPPPPPSQSDRAAPFFSDHSLSGGANEEQQLDHGGNRNPDDDDDDEEEEEEEEDANSDQSSVVE RGDDDLRTDDPDRNSIPSGSDSEGNQEPEIDIENAVGITEEVLTFAMNIAMHPETWLDFPIDEEEDTDDFDMSEAQQEHA AVIERLAPRLAALRIELCPCHMSEGYFWKVYFVLLHSRLNKQDTDILSTPQVREARAMWMKELHKQMKPEFEIFGRNSFY LKDSVQPDDFSPRLVDDTCSDDTPHRTYGSETTTSSSMMADNEIEKYPVESSGTHFIDKSVTEENIVKTENKDLRSGGPS HMIIQDYGGDDDNEWPEEDSDLGGYVGTSLPLLNEEDISFSDLEDDDYDIKHVSSNTGSKLV
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 3 | 458 | 456 | 7.7E-153 | – | |
| PANTHER | 3 | 458 | 456 | 7.7E-153 | – | |
| MobiDBLite | 14 | 189 | 176 | - | – | |
| MobiDBLite | 29 | 50 | 22 | - | – | |
| MobiDBLite | 67 | 82 | 16 | - | – | |
| MobiDBLite | 135 | 153 | 19 | - | – | |
| MobiDBLite | 154 | 176 | 23 | - | – | |
| SUPERFAMILY | 197 | 283 | 87 | 4.18E-20 | – | |
| Pfam | 226 | 283 | 58 | 4.2E-14 | ||
| ProSiteProfiles | 227 | 279 | 53 | 11.617 | ||
| SMART | 227 | 279 | 53 | 1.1E-14 | ||
| MobiDBLite | 332 | 355 | 24 | - | – | |
| MobiDBLite | 408 | 428 | 21 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi1g1v0362700.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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