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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0383200 |
| Transcript ID | LotjaGi1g1v0383200.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | EEIG1/EHBP1 N-terminal domain-containing protein; TAIR: AT3G11760.1 structural maintenance of chromosomes flexible hinge domain protein; Swiss-Prot: sp|P36780|VE2_HPV09 Regulatory protein E2; TrEMBL-Plants: tr|I1K8U4|I1K8U4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0383200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:86661086..86666162) extracted from Lotus japonicus Gifu genome v1.2.
TAGATAAAATAAGTTGGGGTGAGCCCATCCAAATGACCAAAAGAGACACATAGTAATTAGATAAATGGAAGTTTGGTTAG TAATCAGACAAAGTCCAAACCAATCACTTATATTAACTGTAAACTTTGGTAGGAAGACGGTGAGCGTGAACGGCAATGAT GAATTGGCTCTGCTTCTATCTGCCATTGCTTCTGCGTCGCAGTGTGGACTCCTGCCAATAGTATTTGTGAAGACAACATG ACGTCCAAGTCTTTGAGAGTAAAAGATGGATGAAGAGACAAATCAGATGAGAACATACCTAGTAGTTTTCTCCTGGCTCC TTAAACTAGGCAAAGGTCGGTAAAGCAAAGGTTGGGCCAATACTTGCTGCTCTCCATGTAGCGTGCTCCGTGATTAGCCC TAAGATCATATGTTGACAGGTTGCCGAGCTTTGCTTACGTAGAGATCAAGTTTGCGAAGTACATCAACGTTATAATTACT CTCTCTACCTAGGTGTGAAGGTCGAGGTGTTAAGGATACATCAACATTGCTTTCTCTGCCTACACGTGAAGGGTGAGAAC GCTTAGAATATGTCAATATTACTCCTCCCACTATGTGCAACTTGCTACATGGTTGGCCCTCTGATATTTTGTACTAGTCC TCCTGATATCGGGAGAGTGGACGACAATGATTGGCCTTATTCCCAATCAAATCGTTCTTAAGAGTATGGAGCGGTCTTGA GTTGTGAAACATTGCCTTTCCTAGAGCAAGAAAGACACTTTTCGGAGGTAGCTAGGGTTTTGGTTAATCCCCTTGGGGTG TGGCCTAAATGGAAACCCTGAAATTTTCAAAACCACTAAGGTTTGATGTGTGGTTGTAGAGTGTTTAGCTTGTTTCATTA AGTCGGCTTGTGTTTGTGTTTCTCAGGATTCAGCGACAAATCGTCCCTAGGTGAATGAGTAGGCAAGCCATTTTGAGGTT AATGACTTGGGGCATACTAGAATGTGTCATCTAGCGGTAATATCTCGCCATGTGTTGGTTACGTCAGTTTAATGTTAATG GCTTGCGAGATTACAAGTCAGGTCGTCCTAAATCTCATAACTCGATTCGTGACAAAATTTCCAGTTGATTTAATTATGGT AGTCGAGATACTCGAGTGCGTCGAGTACTATCAAAGACCACCATAATAGTTAAGTTTAAGTTTATTCCCATATCTTCTAT TTTTGTATAGTTATAATTTGGTATGAATCCTCTCATTGGTTTCTTCCAGAAGTCCTGTATAATTTTAGTTTAATGTGATT GAGCTACTTGTTCCTCACACAAGATCTAATAGAGCCAAGTCCTAAAATTATTATATTTGTTCTAGAATTCATTGTGCATA TGACATGACAACTACACTTTGCATAAATTAGACAACCTAATGATGGGATAATTATTTGTTGAAACCTAAAAATGAGGTGG AATGAGGTGGAGGAGGAGAGAGATAGGAAGAAATGAAAAAAGTAAGAGAGAGAAAATATAAGATGTGATAAGTGATAAGA GGAGAGAGATAAAAATAAAAATATATGAAAATGAAGTGTATAAAATATGAGGTGTGTATATATCATTGTTGCCTAATGAA GTAATGAATAAATAACATGTGCAAGCGTGTGCGTGTAAAATGTAGGACGCAGAAGTCCCTTTACACGGAAATGTTGAATA ACCAAAGACTACGACTCATTCATTCTTTCTCACTCCATTTCTTCTTCAAAGAAACTCTCTCTGTATATATAAACAAATTA AATATACTAGTAGCTATCAGAGTCTCACTGAAAAGTTTCTCTATTCATTCATATAAATATCAATGCATTTGTTCAATCAC CGTATATACTACTCAAGCCCATTGCTTCTACAGTATTTGAGGTAGCAAGCAACAATCTAGGAGATGACGAAGAAGAAGAT GAATTGGTGGAAATCAACAACAACAAGGTTGTCTAAGCACGCGCTGAAACTGACCCAGCTGAACCTTGAGTTAGGTCTCT TTGGAACCAGAGTGGCTTCCCCAAACGACAAGGTTGCCATTGAGATAACAGGGGAAGCAGCTGCAAAACGACGATGCACA TGCACTCACATCACCTCCTGTCGTAGATTCCTCAGCAACAAAACTTCATCTCTCAATTGGGATACTCCTGAACTCCGCAG TTTCAACCTCGTTCACAAAGAAGATGCTGTGTCCTCTGTTTCATACAACATGGAGTTTCATGTCTTACATGTATGTAACA ACTTCATGCTCTGTTTCTAACTTTTTTTCTTCATAATTTATATTTATTTTTCAATTTTGTTAATTATTTTGAGGTGTAAA ATTAATTTGTGTGAAAAACTATATTCAGGGGAAGGGTGATGCTGTCGGAGAAATTACAAAAGCTAAAATGACGGTGGTCG GAAAAGCTTCCGTGACGGTTGACATGGCGGAGTTGCTGGCCGGGGAGAGGATGAAGACCGGGTCCAGTTCTCATAATCAC CATCACCTTCAACGGAAGCTTCCAATCCATTTGAAGGTCAATGGTTTGATCATCGAAGCTACCCTTTTGGTACGTTCAAA CTTCATTTTTCTTCCTTTTCTTTTCTAGTAATTTATTATATACTTAACTTTAATTACTCTTTATTGGTCAAACCCATTTC ACAAGCTATTTCATGATTTTTCTGTGTATACATGGAAGAAACATGCTAATTTTGTTTTTTTTTTAAATTAGTCATGTCCT ATGTTGTTGGTCCATCACTTCATCTTTTCTCTGTCAATTTATTTTCCAAAATAGTGTTTCTTTGACCATGAGTATAGAAA CTAGAAAGAACTTGTCTTTTTTCTTTATTTTTTCAATCATTCTTAAATCTTTGTTTGACAGCCCCAAATATGTTGAAAAA TGTTATCAATAGGTGAAATCTTTTGATAAACTTTGTTATGTGACACTTCTTTTGATAATTTTATTTGTTGGTAGAAATCT TGTTAGCAAAGCTAGGGCCTAGGTGCAAAGTGTTACAAACATATATACTATGATTAATTTTTGAAGTAAAACATTTTAAC AGGTGTGTATGAGGTTAATGAAGCTTGATGACTTGCAAGGACCCTTTGAAAACTCGATCCACTCAGAGAAGAAAAGTGGG ATTATAGGAAAATTGAAGAGTTTAACATGCTTGGGGAGGAAGAACAATGTCAAGGTTGATCAATCTGAACAGCCAAGTCC TTATGAATCGTATAGCTCCCCTGTGTTTTACTCAGATGATTCTTCCAATGAGTCTACCGCAAGCAGTAACAGTAGCAAGA GCGATGGATTTCATAACTCGGAATCAAGACTTGGGTTCAGAAGCTCAGGGACAAAGACCCCTTTGGACACATCTCAGAGT AATTGGTCATATATGTCACGGAATAGAAGCTTCAAAGGGTGGAACACTAAGACAGATGCTAGCAAACAAGAAACTTCAAC CACTGATCCATGTCCTTTAACGGTATGTAACTATCATCATCTTTTTTGTCACTTTTAATATGTGTTTGATTTTCATTGCA AGACCTCATAAACAATTCTCATTAAGAAAAATCACTTTTTAATGACTATTTAGATGTTTGAGAATCATCGCAGAAAATCG ATTTCAGCATCAAAATCAATTCTACGTAAAATCTTAAAAGAATAGCCTTTGCATTGAACCTAATCAATTCTGACAATTAT ATTTCAGAATAACACCCTACAAAAACCATATTTTTTCATAAATCTATCCAAATATATATAAGAATTATCATAGCATCACT TTTTTTAGGCCAACTAACTAATGGTCCTATAAACTTTCTGCAGAAATCAGAAGAACATTCATTACAATTTTACCTTCAAG ACAGTACAAGTAGCTGGGGAGTGAAGGAATTCTCAAGCAGGGATGGGAAATCAAAGCTCAAAACAAATGTGTTCTTCGCT TCTTTCGATCAACGAAGCGAAAAAGCCTCTGGTGAGAGTGCCTGCACTGTCTTAGTAGCACTCATAGCACACTGGCTCCA TTCCAACAAGGGTATGCCAACAAGAGCAGAGTTTGACAGCCTCATCACACAAGGTTCATCTGAATGGAGAAGGCTTTGCA ACAGCAACTACTACTCAAAGCTCTTCCCAGATAAACATTTTGATCTGGAAACTATCATAGATGCCAATTTAAGACCTTTG GTTGTTCTGCCTCAGAAATCATATACAGGGTTTTTCTCCCCTGAGAAGTTCCACTGCTTGAAAGGAGCAATGTCTTTTGA TGAGATTTGGGATGAGATAAATACCAATGTAGTTGGTGTTTACATAGTGAGTTGGAATGATCATTTCTTTGTTTTGAAGG TGGAAGCAGATGCTTACTACATCATTGACTCATTGGGGGAGAGACTTTTTGAGGGGTGCAATCAAGCATTCATGTTGAAG TTTGATGAGTCTTGTGTGATGTATGGAGAAGTAGAAGAAGAGGGACCATTAAAGGCAAGTGTTGGTGGTGCTAGGAGTGC AGAAAGTGAGAAAAGTTTAGAGGTAGTTTGCAGAGGAAAAGAGTGTTGTAAAGAGTTCATCAAACGCTTTCTTGCTGCCA TACCAGTAAGGCAACTAGAGAAGGAGGAGACGAAGAAATGGGCTGTTTCAAGTACCTATCTTCACAGACAATTGCAGATT GACTTCCATTATAGCACTTCATCATCATCATTATCCTCCACTCCAGCTTCTATGTTGTCTTTCTTAACAAGAGGACTTTG AGAAGCCTAACTAGTTCATGTTTATGTTGGATAAGAGTTGAGTCCAATGAATTTTCATCTAAATTTATTTAGAAGAGTTA TGTACATTTTTATCTTAAAGTGAGTGCTAACATTTGTATATATCAAAATGTCTCTTATCCCCCGGTTAGGTGGATAGTAT GGAGGATACAATAAGGGCAACCTAAATAAGTGTCCTTCACCTCAAAATATCAAGAAAAAATTTAAGGAAACCTAATTAGT TTTGAAAGTTGAGAAACAGAAATTAAATTCTGTATAAAGTATAAGAGTTTAATGGAAATACACTGACAGTGTAAACCATG TTTACACAGTCACCCAATAGAAATGCTTCTTTTTGCC
CDS sequence (LotjaGi1g1v0383200.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGACGAAGAAGAAGATGAATTGGTGGAAATCAACAACAACAAGGTTGTCTAAGCACGCGCTGAAACTGACCCAGCTGAA CCTTGAGTTAGGTCTCTTTGGAACCAGAGTGGCTTCCCCAAACGACAAGGTTGCCATTGAGATAACAGGGGAAGCAGCTG CAAAACGACGATGCACATGCACTCACATCACCTCCTGTCGTAGATTCCTCAGCAACAAAACTTCATCTCTCAATTGGGAT ACTCCTGAACTCCGCAGTTTCAACCTCGTTCACAAAGAAGATGCTGTGTCCTCTGTTTCATACAACATGGAGTTTCATGT CTTACATGGGAAGGGTGATGCTGTCGGAGAAATTACAAAAGCTAAAATGACGGTGGTCGGAAAAGCTTCCGTGACGGTTG ACATGGCGGAGTTGCTGGCCGGGGAGAGGATGAAGACCGGGTCCAGTTCTCATAATCACCATCACCTTCAACGGAAGCTT CCAATCCATTTGAAGGTCAATGGTTTGATCATCGAAGCTACCCTTTTGGTGTGTATGAGGTTAATGAAGCTTGATGACTT GCAAGGACCCTTTGAAAACTCGATCCACTCAGAGAAGAAAAGTGGGATTATAGGAAAATTGAAGAGTTTAACATGCTTGG GGAGGAAGAACAATGTCAAGGTTGATCAATCTGAACAGCCAAGTCCTTATGAATCGTATAGCTCCCCTGTGTTTTACTCA GATGATTCTTCCAATGAGTCTACCGCAAGCAGTAACAGTAGCAAGAGCGATGGATTTCATAACTCGGAATCAAGACTTGG GTTCAGAAGCTCAGGGACAAAGACCCCTTTGGACACATCTCAGAGTAATTGGTCATATATGTCACGGAATAGAAGCTTCA AAGGGTGGAACACTAAGACAGATGCTAGCAAACAAGAAACTTCAACCACTGATCCATGTCCTTTAACGAAATCAGAAGAA CATTCATTACAATTTTACCTTCAAGACAGTACAAGTAGCTGGGGAGTGAAGGAATTCTCAAGCAGGGATGGGAAATCAAA GCTCAAAACAAATGTGTTCTTCGCTTCTTTCGATCAACGAAGCGAAAAAGCCTCTGGTGAGAGTGCCTGCACTGTCTTAG TAGCACTCATAGCACACTGGCTCCATTCCAACAAGGGTATGCCAACAAGAGCAGAGTTTGACAGCCTCATCACACAAGGT TCATCTGAATGGAGAAGGCTTTGCAACAGCAACTACTACTCAAAGCTCTTCCCAGATAAACATTTTGATCTGGAAACTAT CATAGATGCCAATTTAAGACCTTTGGTTGTTCTGCCTCAGAAATCATATACAGGGTTTTTCTCCCCTGAGAAGTTCCACT GCTTGAAAGGAGCAATGTCTTTTGATGAGATTTGGGATGAGATAAATACCAATGTAGTTGGTGTTTACATAGTGAGTTGG AATGATCATTTCTTTGTTTTGAAGGTGGAAGCAGATGCTTACTACATCATTGACTCATTGGGGGAGAGACTTTTTGAGGG GTGCAATCAAGCATTCATGTTGAAGTTTGATGAGTCTTGTGTGATGTATGGAGAAGTAGAAGAAGAGGGACCATTAAAGG CAAGTGTTGGTGGTGCTAGGAGTGCAGAAAGTGAGAAAAGTTTAGAGGTAGTTTGCAGAGGAAAAGAGTGTTGTAAAGAG TTCATCAAACGCTTTCTTGCTGCCATACCAGTAAGGCAACTAGAGAAGGAGGAGACGAAGAAATGGGCTGTTTCAAGTAC CTATCTTCACAGACAATTGCAGATTGACTTCCATTATAGCACTTCATCATCATCATTATCCTCCACTCCAGCTTCTATGT TGTCTTTCTTAACAAGAGGACTTTGA
Protein sequence (LotjaGi1g1v0383200.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MTKKKMNWWKSTTTRLSKHALKLTQLNLELGLFGTRVASPNDKVAIEITGEAAAKRRCTCTHITSCRRFLSNKTSSLNWD TPELRSFNLVHKEDAVSSVSYNMEFHVLHGKGDAVGEITKAKMTVVGKASVTVDMAELLAGERMKTGSSSHNHHHLQRKL PIHLKVNGLIIEATLLVCMRLMKLDDLQGPFENSIHSEKKSGIIGKLKSLTCLGRKNNVKVDQSEQPSPYESYSSPVFYS DDSSNESTASSNSSKSDGFHNSESRLGFRSSGTKTPLDTSQSNWSYMSRNRSFKGWNTKTDASKQETSTTDPCPLTKSEE HSLQFYLQDSTSSWGVKEFSSRDGKSKLKTNVFFASFDQRSEKASGESACTVLVALIAHWLHSNKGMPTRAEFDSLITQG SSEWRRLCNSNYYSKLFPDKHFDLETIIDANLRPLVVLPQKSYTGFFSPEKFHCLKGAMSFDEIWDEINTNVVGVYIVSW NDHFFVLKVEADAYYIIDSLGERLFEGCNQAFMLKFDESCVMYGEVEEEGPLKASVGGARSAESEKSLEVVCRGKECCKE FIKRFLAAIPVRQLEKEETKKWAVSSTYLHRQLQIDFHYSTSSSSLSSTPASMLSFLTRGL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 11 | 609 | 599 | 3.5E-192 | – | |
| PANTHER | 11 | 609 | 599 | 3.5E-192 | – | |
| MobiDBLite | 218 | 283 | 66 | - | – | |
| MobiDBLite | 295 | 316 | 22 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi1g1v0383200.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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