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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0385900 |
| Transcript ID | LotjaGi1g1v0385900.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Acyl-protein thioesterase 2; TAIR: AT1G52700.2 alpha/beta-Hydrolases superfamily protein; Swiss-Prot: sp|O95372|LYPA2_HUMAN Acyl-protein thioesterase 2; TrEMBL-Plants: tr|A0A0B2PKK2|A0A0B2PKK2_GLYSO Acyl-protein thioesterase 2; Found in the gene: LotjaGi1g1v0385900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:86939048..86943440) extracted from Lotus japonicus Gifu genome v1.2.
ATGAGCTACCACAACTCCTCAATGAGTTCTGGTTAGTTCTTTTGATCCAATGCCTTCTCCATTGCTGTACACAGTATAGT AATTAAGTACTCGTTTAGACGCAAAATTGCAAACCAAAGAACACTAATTGGAGCTTATTTAGTGCATTTTTAGTAGATAA GCTCCAATAAGCCTGTATCTAAATGGGCCCTAAGTCATCTAGGATTATGACATTTTTTTAAATGAACTTTATTCTGTCAT GTTTCATCAGGTAGTGGAACTGCTAGAAGGATATTGGAGTTTGGAAGGACTCATGTGGTTAGACCTAAAGGGAAGCACCA GGCAACTATAGTTTGGTTACATGGCCTTGGTGATAATGGCTCTAGGTATGTTGTTAACATGAATAGTCTTGGTTTATAGA TGAATACTCTCTATTTCTTTTTGGTAATCTTTCAATTTGAACCACAGTTATCCTCCACTGTGGTCAATCCTGTTCGAGTC GGGTAGGACCACTATGGGTGGCAAATATTTCTCTACCAAGCATTTAACGCAGTTGCATTAGAATTAGAATGCATCTGGAA TTTATTTCAGGGAAAAGTTCTGTTTCTCTTTTTGAGCTGGTTGGCAAATGGAATTAAAGGTTATATAGTTTGAAACTCAA TATACTCACAACAATAGACATCCGTGCATTTTCTCAGTGACTGTCCTTGTCAATGTGCATGGCTCAACAATTTGGAGTTG GTTAATTTAGTGGATACCTTCTCCTTATGCTTCAGAATATGTCTTTTGAAAGGGTGGGTTTGTTTTCTTCTAATAAATTT AAGGGAGTAAGGGAATGTCAATATCTTGTCCTCTTCTGGTGAAGTTTGTCTATTAAACAAACTCTTAAGCTCCATATCCT TTTTGGAAACTTCTTACATGTTGATTTGTTACTTTCAACCAAAAGAGTATTATTAATAATCATTTTATTTTAATCAAGGA TTGGCTCTGAAATTTATATAAGCTAAATAATAGAAAGGGGACCTCTTCTTCACTAGCTATTTTATTCCCAAAACTCAGAA AAGGACACCTATAGTCCCTGTGCAAGTAAAAAGTCTTGGCTTTCATAATTTTGAAATTAGGTTGATTAGTGCATATATTT ATAATGCAATTTAAGCTATTTATTAGTATTTATTGTGGTCCCAAAATTAAGTAGGGGGGATATACTATTGATGTGCCTTT CCTTGAAGAAGCTTCATAATAGTTTCAAATATCATCTTTAGTGGCCGAGCTCTAAGCCTATGAATAGTTTTGACATTTTT CTACTTTAGTCTTTTTGTTTATTTGGTTGATGAGTCCAAGATTAGCCTATGGTGTATTAAAATTTAAAATGGACTTTATT TTGTTTTGCAGCTGGTCCCAACTCTTGGACACTCTTCCTCTTCCAAATGTAAGAATAAGCATATACTTGACATTGGCATA CAACCAGGGTTGTTAATGGCGGATAGCGTAGTGTAGCGGCAAGCCAAAAAAAGCTATTTCGAGCGCTATTGCGGCGCTAT AGCGGCAAATAGCGCAAATACTGCTATTGCGCCGCTATAGCGCGCTATTAACAAGCCTGCATACAACACATCTGCAGTTA CATTTGTATGCTAATTACAATATTTCAAAAGGATGCGCCCTTGTTAAGCAGATTGCACTTGTTTTGTTGAATTTGATGTT GCAGATTAAATGGATTTGCCCAACTGCTCCTACTCGGCCTCTAGCCTTATACGGTGGATTTTCTTGCACTGCTTGTAAGA TTTAATGCTTTTAACACTCAACATTGTTCACTTTAAAACACCATTGCCTTTCACCATTTTCCTTTGAGTACAATTTTTTA TTTACTGTATAATCAGTGTAAGACTATAATGCCTGCTCCATTTTAACTGCCAAAGAACAGTCTAATTTGATTGATGCATC TCTACAGGGTTTAATGTTGAGGAGATTTCAGCTGATGCTCTAAATGATTTGGAGGGTTTAGATGCTTCTGCAGCACACGT TGCCAATCTTTTATCAACAGAGCCTCCAAATAGTAGGTTTTCGATTATCCCTTAAGAAACTCATTGATGTGATCTAACAT ACTTTTCTTGGTTAAAGATGTGGTTAACTATATTAGCCAAGTCTATAATAAAAGTGCGGTAATTGAAACTGTGATAGCAG TTGCTAACACCACAAATATAGAATAAATCTCTCTATAAGCAGCTGCTAGTTTTTAATTGTAAGTTTTCGCAAACTTCCAT ATATGGCAGGGTACATGAATTGAGCTTTTGCCCTTGGTAATGTAGAGTGAAAGCAAAGAGTTTTCCAGCATTGGGGTCTG TCCAATGATATTGTCAACATGATTGAGATTGTTGAAGTATTCAACAAGTTAATGCTTTCTACATTATTTCAGAGACTCCA TAATTCAATATTATTGTTCCATAGAGATTCACTCTATGATAAAGTTGCATAGCAAGTGTTATTGCTGTCAATACTGTATA ATTACATGTATGTTTGTTTGGGGAAAAGAGAGAGAGAGCATTTTTCATGAGAAAAACAGCTTATGCTATTTTTTCACTGT TTCCTTGTCAGTAGAACAATAACCACTGCAAGAAGATGTTGCTTATATATAGCAGCAGGAAAGTATTCTCTTTTTACTTT ATTTGTTACTTAGATGCAACAATATTTGATATGTTGGTATGGGAAGAAAGAAGTGCATGCTTACCAGTCAAAAAAGCCTA TATGAGGCTTTGAAATAAGGAAATAACCTTATTATTTAATAAAGTGACTGAAGTTGACATGGAACCCTTAATATTAAATC TAAATAGCTTGTAAATTGACTTAAATGTTACTGTTCACCTTGCAGTCAAACTTGGTATTGGAGGCTTCAGCATGGGTGCT GCTACTGCACTTCACTCAGCAACATGCCATGTTTTGGGGCACTATGGGAATGGAAACATTTACCCTATCAACTTATGTGC AGTTGTTTCTTTAAGTGGCTGGCTTCCTTGTTCAAGGTTTGGTTTCTACCATTTGTAAATGAGTGAATAGATAAATACAC TAAGAATAAGGCACATCCAGCAATAATTTCTTCCTTGTCTTTAAGCTATGCATTATATAAAACACTCAGAAGCTGCAAAT TAGTGCAGGACCTTGAAAAGCCGGATTGAAGGATCCCGTGATGGCATAAGGCGTGCAGCCTCAATGCCCTTATTTCTCTG TCATGGAATAGGTATTCCTAAATTCTATCATTTTTCATTATAGCTTAACATTTAAATGGTTATTGTTGGGAATCTTTTCC TTTTCTAATATTTAGGATATAAAACAATGAGTGGTTCATTTGTCCGGAACAGTCTGTTACTCTGTTCCTCACTCTGAATC CCTTCCAAGAGATATCTGCACACTGCTTAAGTTTTTTGATATTAACATAACTTCTTAATACTTTCACAGGTCAATAATCT TTAGATCTGTAATAATATTTGTGCTTGATAATAATAACAGTTTCTGTGCACAAAGGTAAAAAGAAATGCTTTGGAGTGTT GAACAATTTTCACATGGATGGAATTATGTTAGTTTTTAATAATTTATCATGTGTTGCAATTACGGTCTATATTAACGTAT TCTTTTAATGAGATGTCAAAATCTTCATTTGCTATGGCTTTTCAACACTTTCTGGTTTCTGTGAATGACTAGAACTTGTA ATATAAGTTTACTCCCTTCTTTAAACATAACTTTGTATCAATTTATGTATCTTTTCACCCATCAACTAAAGCTTTTGGAA TAGTTGGTTCATGTCATGACATCAAAATCTCGACAACCAAGTGGTCTCGTGTCCGATCTTTGTTGCCCCCATTATTCTAA TTAAAAGCTGAGTTTTAGTACAAGGTAGGTTGACATGTGCATTGTCCACGCTTCAAGCCTAATGTGCTATTGCGTGAGAG GACATGTTAGAAATATAATATAAAACCATTCGCGAGTCTTCACCCAACCGGTTAAACTTTTGGGATAGTTGGTTAATGAC AACAATAACCTTTGCTTGCCTTATCTGTTGTAGCTCAAACTCCATGGTTGGTATTTATCATGAAGTAGGGATTGGGAACA ATACCTGATCATTGTGCTATATGTCTTGAAATGTTCTTGTAGGTGATGATGTGGTTGCATATGAACACGGAGAGAATTCT GCAAGGACCTTAAGCTTAGCTGGATTCCAGAATCTTACATTTAGGAGCTACAATGGGTATTCAACTTTGTTTGTTATGCA ATTATGCAAATGTTATCATATTTGTGAATGACTTTAGTCTAATGAATGATGTTGCTGTGCAGGTTGGGTCACTATACAAT CCCTGAAGAAACTGATGAAGTTTGCAGGTGGCTAACTGGACAATTGGGACTTGAGGGGTTCAGATTGAACTAG
CDS sequence (LotjaGi1g1v0385900.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAGCTACCACAACTCCTCAATGAGTTCTGGTAGTGGAACTGCTAGAAGGATATTGGAGTTTGGAAGGACTCATGTGGT TAGACCTAAAGGGAAGCACCAGGCAACTATAGTTTGGTTACATGGCCTTGGTGATAATGGCTCTAGCTGGTCCCAACTCT TGGACACTCTTCCTCTTCCAAATATTAAATGGATTTGCCCAACTGCTCCTACTCGGCCTCTAGCCTTATACGGTGGATTT TCTTGCACTGCTTGGTTTAATGTTGAGGAGATTTCAGCTGATGCTCTAAATGATTTGGAGGGTTTAGATGCTTCTGCAGC ACACGTTGCCAATCTTTTATCAACAGAGCCTCCAAATATCAAACTTGGTATTGGAGGCTTCAGCATGGGTGCTGCTACTG CACTTCACTCAGCAACATGCCATGTTTTGGGGCACTATGGGAATGGAAACATTTACCCTATCAACTTATGTGCAGTTGTT TCTTTAAGTGGCTGGCTTCCTTGTTCAAGGACCTTGAAAAGCCGGATTGAAGGATCCCGTGATGGCATAAGGCGTGCAGC CTCAATGCCCTTATTTCTCTGTCATGGAATAGGTGATGATGTGGTTGCATATGAACACGGAGAGAATTCTGCAAGGACCT TAAGCTTAGCTGGATTCCAGAATCTTACATTTAGGAGCTACAATGGGTTGGGTCACTATACAATCCCTGAAGAAACTGAT GAAGTTTGCAGGTGGCTAACTGGACAATTGGGACTTGAGGGGTTCAGATTGAACTAG
Protein sequence (LotjaGi1g1v0385900.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSYHNSSMSSGSGTARRILEFGRTHVVRPKGKHQATIVWLHGLGDNGSSWSQLLDTLPLPNIKWICPTAPTRPLALYGGF SCTAWFNVEEISADALNDLEGLDASAAHVANLLSTEPPNIKLGIGGFSMGAATALHSATCHVLGHYGNGNIYPINLCAVV SLSGWLPCSRTLKSRIEGSRDGIRRAASMPLFLCHGIGDDVVAYEHGENSARTLSLAGFQNLTFRSYNGLGHYTIPEETD EVCRWLTGQLGLEGFRLN
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 255 | 255 | 2.6E-163 | – | |
| PANTHER | 1 | 255 | 255 | 2.6E-163 | – | |
| Gene3D | 13 | 251 | 239 | 2.2E-58 | ||
| Pfam | 25 | 243 | 219 | 2.0E-34 | ||
| SUPERFAMILY | 25 | 249 | 225 | 2.63E-41 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Hydrolase activity | Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3. |
Expression pattern of LotjaGi1g1v0385900.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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