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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0388700 |
| Transcript ID | LotjaGi1g1v0388700.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | TIFY domain protein 8; TAIR: AT4G32570.1 TIFY domain protein 8; Swiss-Prot: sp|Q84MB2|TIF8_ARATH Protein TIFY 8; TrEMBL-Plants: tr|I1JUH9|I1JUH9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0388700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:87220935..87227703) extracted from Lotus japonicus Gifu genome v1.2.
TGGAAAAGGAATCACATTCTAAACAGATCCCTCTCCCCAATTTGGACCATTATGAGATTCATAATGACATTTCAACATAA CAATCACCTTATTTCTCTCAACATCTTCTTCCATAAATATCACAACAAATACTTCAATTTTTCTATCACTCGCTCACTAC GAGTTGGATGTCTACGCTACGCGGATGTGTGTCGCCGGTCAATCATTTTCCTTTTCTAACACTCACTAACTGAGTTGGAT GTCTACGCTATGCAAATGCGTGTTGCGTGTCAATCATTTTCCTTTGTTAAATACTCTCACTCTCACTCCAATGTAAGAAA GAAGTAAGACAAAGGTCACGAGTTTATTACATTCACTAATCTCCGGGCACGGTTTCAGAGAAATGGGAGAAGAACGACAA CAAAAACAGAGACAGACATGCGCACATTAACACCAACAACAACAACAATTGGAAGAAACAAAGAGAGAAAGAACCTTTTG CTTTTCTCTTCACTCTCTCTCTCTCTCTCTCTGAAAAGAACTGATTGAGATTCTTTTCTCTCTGCCACCATCATCATCTT CATCATCATCTTCATTCTTCTTTTTATCCTTTTCCAGAGATCGTGCTGCTTCTGCTTTCAGCTTCTTCCCTCTCACTCTG TTGTTAGCGTATGCAGGGTGAGATGGGTATTCAATGGCGATGCTGAGAATGGCTCAGCCTCAACAGCATAACAATGACAG CAGTTTGAGCCAACAACACTTGGTCCTCCATGATTTTCTGGGCATGAAGCCCTCTGATGCTTCCCCTGATGTTAGGTTAT CGGAGGTGACGCTTGCCGCCGCCGCCTCTTCCGCCGCTGCACGTGGTCCCTTTTCCTCCACCTCTGACACCGCTTCTGGT AAGTGAAAAAAAACCCCATTTGCTTCAACCTTCAAAATAAGTACTTTTCAGTTCAAATAATTGAAAAAAAAACTTTCTTT TAGGGACATTACCTCTTGCGGCTTGCCCATGAAACCCTTGTTTGGTTACTTTTGAGTTTTTTCCTGAATTGATTTAATGT TCTATATTCACCTTTTTTCACTTTCTGAGGGGTTTGTTTAGGGAGGTGAGTAATGGGGGTAAGGTTGGTTCTGTTGGTCT TTGTTTTCTTAGCATAAATGTCTTTGTGACTTTGTAGTAGTAATTTTTTTTTTTTAATTTCTCCCTTGAACATTTGGTCC TTCATTCTCTGATGTCTTAAAGACTGTTTTGATTTCAGTTCATTATTCTCTAACCAACTTTTCATGCATTCCAATGCACA TTAAATAGAAGCAAAGTACTTTCAACTTTAAAGTAACTCAAATACAGACAGACTTGTCTTTCAGCAAGTGTGGTTTTAGG TAGTAGGAGTTGCTTCTTCTTTCTACTGGTATGCAATTATAGTATCAGGTTTTTTCTGTACTTTGTTTTGCTTTGCAGAC TGCAGTGTGGTGTTTGGTTTGATTCTCTGTTTGTCTTCTACAAGTTTCACTCAATGTGATAATTGAGAGTGGGAGATTTC ATGGAAATGCTGAATGAAAAGTTCTATTGTTCTGTGGACAGAAACTTTGTCATGCCCTGTCATGTGTGTGCAATGGGGAT GATGATCATATGCTGAAAAGTTACATTTTTAGGTTTTTATCATAATTATTGTTATTGTGTTGTCTCTTTTTTCTTTTCTT GGTGTTTTAATCAATAAATGGGTGTTCTTAATCGGAAAAAATCTTATAGTTGAAAATACTTATTATTTATGGAAGTTTCC ATTAAGGGTTATCGACTTATCGTTTCTTTGAATGTAATGCACTAATGTTTTTTCCCCTCATCAATTTGGTAGAAAAACAG GTAAGTAATCATCTCGAGGGAGTTCCGTACTATGGCCCGAGGGGTGATTTTTCTGGCACCGAGATAAGTAATAGACTGGT GGGAAACAAGAGAAGCAATTCCGATTCTACTTTTATGGGTTCCTCCAGAGATGCCTTCCAAATGGTCCCTGATTCCTTCC AAAACTCCCATTTGATGAAGGTTACTTTGAATTGTCACTTGATTCCTCTTCACCAATATTCTCAATAACCAGAAAAGGAA AAATCTTTAATTTCATCTTATCTTCTTTTATATTGTGAGTTCTGTTTTTATACAGGTTTTCCGGAATTCGGCTGGCGGAG ATAAGTCTAGAAGGCCCAATGATGATGACGGGTTACTTGGTATGCCTTCACTGAAGCCATCTTCTGCTTCTCAGATATTT CAGCCTCCCACCAGCACCAGGATTGATGCTAGCAAATGGGAACGATCTATTCTCATGAACATTGGCTCTTCCGTGCAACA TCCACTGCGTGGAGGGCAATTGACACCTTATGCACACCAAATGGCTTCAAACAGGATAAGGGATACCAATGCTGGTCCTT CCTATATCTCTCAGTCAGCTGCTGATGAAGGATCAAGAACTGGAATGAAGGGCCCTGGAATCTTAAGTTCTGTAAATACA ACTGCTACTGCAGCCGAGAAAACTCCATCCACAGTGCTGCTTGGTGTAAGCAGGCCAAAGCCTCTACCTAATTTAATAGA ATCATCGACACCTCCAAGGTAAATTTGTCGTTACAGTTGCTCAATTGCCCTCGGTTCTTTTATTTTCACTCCCCTTCACA TTGGAAAAAGTAGAAGTTGCCTGACATTATGCATTTTGGTATTAATAGCAGTCAACATGGGCTGACATCTGCCAGCCGTC AGATGACTATTTTTTATGGAGGTCAAGCTCATGTTTTTGATGATGTCCACCCTCATAAGGTTAGATCGGATCTTCACATG GCTTATGGGTTTATTGCATTTCGTCAAAAAAGGCCTGAAATTAGTTTGTATTTGTGAATCATCACCGGAAACAATTTATG CCTTAAAATTTAGTTTGTGGTTTAGTCATACGTGTGATTTAACAATTGTTCTATCTACTACTAAAACTGCGGCGACAACA TTTTTTTCCCCGAGCCCTACGGCAGCAAAGTTTTAAACTCATTGGAAGTTCTACTTTCATTCTTATTTTAATTGACAGAC ATGTGTGATATTCTAAGATCTAAGTTGATTTCTGTACCACGTTCATGTTGTGGTATCTACAACTAATTTTATCTGTTCAT TGTACAATCTGGTGGCTGTGCTGAACCTGTAATAGATGATAAAAACACTTAGCAGCAACCAACAATAGTTTTGCTTAAGC TTTGGTTCCCAAAAGTTGTCTTTTTCTCTTACTGATTTGAACAATTATTCAAGTTCTGTTCTAGTCTTCCGGAGTACGCA TTCTGCTGTTGTAAATGGAATATATTTGACGATTTTTATGGTTTTAGTCAAGGCAGTAGAATTTAAAGTTAGTTTATTTC ATTCATCTGGGTGCAATAGCATTCTTCCACATGGATTTGATTGCCTATAGCTCTGTGCATGAAGCATGAATCCGTCAAGG AATTTGGGCTGGCATAAAAATAATAGGGTTGGCAATATTAGCAAAGATCGTATTAGATTTGCATGCAGATCGGACTAGGA GGTTACAGCATTTAATTGTTGTATGTTGTGTTGTTTGATGAAACATTAAATGTACTGTCCTGGCTTGGACATGGAGAAGG GCCAATGTTACCCTGTGTCTTGTTTTTTATGTGTTTGAGGTTTGATCATTTAATATGATATAAAATCATTGATATGGCTT CATCTTAACAAAAGTTTTTGGTTTAGTTGGTTTATAACATGATGTTGGAGCCTGCATGGCTTAAATAGTTTTATTCCATC ATTGCTGTCCCTATTTGTCTAAATAATAAAAAAGTAAGTTGAAATTAAGCATAAGTCTGCACTTTGCGCCTTTCAAGTCC AAAGCACTATTGCATGAGCATGTAAGAGATGCAATTTAATATAAAACATTCACTTGCCTTCACCTAGTAGCTTAAACTTT TGGGATGCTTAGTTCATTTCAGTGTGCTCATTTTTGGCTACTCAGTTCCAAAACATGTTACTGCTAGTTTGCTACAATTT CCTCTTCACCTTTTAATCAAACCTTTCACTCTTGAATGTGAAGACCTGCAATATTCTATGGGACTGAATGTTAGGTGGTA AATAGCCTAAAAGAGAGTAAGTTTAGTGTTGAAAAGATGAGAATGTTCAGAAGGATAGGTGGTCAGGAACTCACGCCACA CAAGACAAGATAGGGCTAGGTATGAAAGTATTAAGAGTGAAGGTTGGTGTAGTACCCATGGTAGAAAAGATGGTTGCATT TTTAAGGTGGCACAAGTAAGGAGAGATATTAAATGCATGGTAATCCAATAGTTAATGTAGAAAGAGACCGAGGAAAACTA TGCGTCAAACCATTGAGTGAGATTTGGATTTAAATGGTATATCATTAAACATAGTTTATTATAAGACATCTATTATGCAT GACCTCATCAAGTGTGGGAAAACTGTTTGGCCATTATGGTTGTTACTCTCAAATGTGATGGTTCCCTTAATCTATTATCA CATTTTATATGTATTTTTTTATTCCTCTTCAATACTATTGCTTGAGTTTAGTCAAATATATTTTTTTAATTATCAATGTC AAAAGTTAGACTTTCCATAACTATAAATTTGGAGTTCACAAGTTTTATTTTTGACGCATCATATCAAATTAATTGACACC ATTGATGACATGCCTTGATTCATGCAGTTTTTGAATAATTTTTTTTACGATTTGAGAGGTTGATAAGTTTCTTGTCTGCA ATTTGTGCATAATTATAATGTTGGAGAATCCGAATCTTGTTTGCTAGTTTAAAATAAAAATCTAGTAAGTATCTGTTAAA ATTTTATATCCTAAATTCTGATCTGGTTAGCTTTTGTGCAGTTATAATTCTTCTGTGTATCTCTAATAAATTTATTCACA ACACCTATATTGTATGAAAACAATAACTATGTGGAGTGGCTACGTGGATCAAGCGATGTCATTGTGTTTTATCAAAAACC AAAATTTTGTTTAAACCATTTAGGGGAAAATCTCTTTTTAATAGTTTCTCCTATTGCTTTCTTCGGTCTGCTTCTGCCCA TTTTGAAAAGTAGCTTGGTTTGAATATTAAGTTGTGATCATGCTATGATGTTCTTGGAAGTTTAAAAGAGCATATAGGCT GGCTTGGTCTTCAAAGCTGAAACAGAAGGTCTTTTATTTTGGATCATTCCACTATTCTGAAATTTTACGCCTGTGCAATT TGTCTGGTAGTACTGGTTTCAAATTTTTTTTTATCATGAATTCTTTATGCTCTTTGATGCATGCAGGCGGATGTTATAAT GGCTTTGGCTGGGTCAAATGGTGGATCTTGGTCCACAGCGTTCTCGCCAAAATCTACTGTAAAGCTGGTTAATGATAGTA ACTTACATAGTGGAGAAAATGAAACTGGTATGATAAGTAATGTGCCATTCCCACAGGAAATTCATGGGAAATTGTGTATT ACCGGAAGTTCTAGCCATGCTGGGCTTGGTGATCGAGTATCTACACCAGCAGGTAAACATAAAAAGATTGTGCTTTGTTT GGTTTAGCTACTTTGAGACTCATGGCATCAGAGCCTACCATAGATTCGTTTATTGGAGACTGCCCATGTATGTGCCACCT GCAGATGTTCATTCCTGCAAATTCCACACTTCAAATCTCCAGCCCTGAGCGTGAAGGTGTGTGTTCTGAAGTCCTACATT ATATGGCCAAAATAGTTCTTATAAAGGATAAATCAATCCCATCCATAAGCTAGCTTTTGGGTAGAGTTAAGCCAAACCAA AAATCTAAGTAGGAGAATACTGATCCTTCCTATCCCATCCTTGTGTTGATCTTTTACTTTTAGGCCTTGCTTTCTAAATT CAGTCCAATATTGCTCACATCGGTTCCTATAGACCTTGCTTGAACCAGCTCAAAATATTTTTCATGATTTTGGTTGTGAC ATGATCCTTAGGAAAATGCTCATCTTCTTAATGCCAGAGTTTCGTTTCTTTTGAACTGTACAATTTGTTATCCTTTGGTT GTAGGGGCACACCAAGGAAGCATATTTGCTAAAGATACAAGAAATCCGGGTCAACCAGTGGATCACAGTTCTGAAGACAA AAGAGCACATTGAATAGAGAGTTTGAGGCTGAGAGGTTTTTCTGTTTCTTCTATAAATTCGAAGGCTTAAGAGCTTCTCT TATTCTGGTTATTGCTGGATGTCATATCATTCCTCTTTGTCAAATTTTCTCCTGATCTTTCAACAACCCAAAATTTGTTA TCTTATTTTTTTGTACAATATATGTTAGGAGCAAGAGTATGATCATGATGATTGTTTAAAAGGCCTAACAGATATATTAG CTAAGTTTATGAAGTGTTTCCATTTTTCAACGTTAAAAGTCTGATATTACTGTTTCTATACACCAGTCACCTTATCAGGA GAAGCAGCTCCTTATGGGAATACCATAAATGAAACTTGAGTTTAAGCACCTTGCATCTTTTCTACATCTTCTCATTAATG GGTATTTTATGCATTTATGCACCTTGCATCCAAAGCCTTTTAAGTCCGGGGTGACTTTTAGTGTGTTTGAGTAACAGTTG AATTAGCGTAAAAACACATTCATCTTAATCTATAAGTGTGTGTCTGCTTAAGGACATGAAGGTCCGATTTGGTCTGTTGA AGTTCATTGGAGTTGGCGCATTGGAATTGTAAATCACACTTGTGATGAGAAAAATGTGGAATTAACTTGTTGCTCGTCTC TTTGCCTAAATGAAGTCTAAGAAGAGTTTTGTTTATCTTTTTTGTCTCG
CDS sequence (LotjaGi1g1v0388700.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCGATGCTGAGAATGGCTCAGCCTCAACAGCATAACAATGACAGCAGTTTGAGCCAACAACACTTGGTCCTCCATGA TTTTCTGGGCATGAAGCCCTCTGATGCTTCCCCTGATGTTAGGTTATCGGAGGTGACGCTTGCCGCCGCCGCCTCTTCCG CCGCTGCACGTGGTCCCTTTTCCTCCACCTCTGACACCGCTTCTGAAAAACAGGTAAGTAATCATCTCGAGGGAGTTCCG TACTATGGCCCGAGGGGTGATTTTTCTGGCACCGAGATAAGTAATAGACTGGTGGGAAACAAGAGAAGCAATTCCGATTC TACTTTTATGGGTTCCTCCAGAGATGCCTTCCAAATGGTCCCTGATTCCTTCCAAAACTCCCATTTGATGAAGGTTTTCC GGAATTCGGCTGGCGGAGATAAGTCTAGAAGGCCCAATGATGATGACGGGTTACTTGGTATGCCTTCACTGAAGCCATCT TCTGCTTCTCAGATATTTCAGCCTCCCACCAGCACCAGGATTGATGCTAGCAAATGGGAACGATCTATTCTCATGAACAT TGGCTCTTCCGTGCAACATCCACTGCGTGGAGGGCAATTGACACCTTATGCACACCAAATGGCTTCAAACAGGATAAGGG ATACCAATGCTGGTCCTTCCTATATCTCTCAGTCAGCTGCTGATGAAGGATCAAGAACTGGAATGAAGGGCCCTGGAATC TTAAGTTCTGTAAATACAACTGCTACTGCAGCCGAGAAAACTCCATCCACAGTGCTGCTTGGTGTAAGCAGGCCAAAGCC TCTACCTAATTTAATAGAATCATCGACACCTCCAAGCAGTCAACATGGGCTGACATCTGCCAGCCGTCAGATGACTATTT TTTATGGAGGTCAAGCTCATGTTTTTGATGATGTCCACCCTCATAAGGCGGATGTTATAATGGCTTTGGCTGGGTCAAAT GGTGGATCTTGGTCCACAGCGTTCTCGCCAAAATCTACTGTAAAGCTGGTTAATGATAGTAACTTACATAGTGGAGAAAA TGAAACTGGTATGATAAGTAATGTGCCATTCCCACAGGAAATTCATGGGAAATTGTGTATTACCGGAAGTTCTAGCCATG CTGGGCTTGGTGATCGAGTATCTACACCAGCAGGGGCACACCAAGGAAGCATATTTGCTAAAGATACAAGAAATCCGGGT CAACCAGTGGATCACAGTTCTGAAGACAAAAGAGCACATTGA
Protein sequence (LotjaGi1g1v0388700.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAMLRMAQPQQHNNDSSLSQQHLVLHDFLGMKPSDASPDVRLSEVTLAAAASSAAARGPFSSTSDTASEKQVSNHLEGVP YYGPRGDFSGTEISNRLVGNKRSNSDSTFMGSSRDAFQMVPDSFQNSHLMKVFRNSAGGDKSRRPNDDDGLLGMPSLKPS SASQIFQPPTSTRIDASKWERSILMNIGSSVQHPLRGGQLTPYAHQMASNRIRDTNAGPSYISQSAADEGSRTGMKGPGI LSSVNTTATAAEKTPSTVLLGVSRPKPLPNLIESSTPPSSQHGLTSASRQMTIFYGGQAHVFDDVHPHKADVIMALAGSN GGSWSTAFSPKSTVKLVNDSNLHSGENETGMISNVPFPQEIHGKLCITGSSSHAGLGDRVSTPAGAHQGSIFAKDTRNPG QPVDHSSEDKRAH
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 53 | 73 | 21 | - | – | |
| MobiDBLite | 56 | 73 | 18 | - | – | |
| PANTHER | 57 | 412 | 356 | 8.1E-141 | – | |
| PANTHER | 57 | 412 | 356 | 8.1E-141 | ||
| MobiDBLite | 135 | 169 | 35 | - | – | |
| SMART | 284 | 319 | 36 | 2.7E-15 | ||
| ProSiteProfiles | 284 | 319 | 36 | 15.511 | ||
| Pfam | 286 | 318 | 33 | 3.4E-15 | ||
| MobiDBLite | 377 | 413 | 37 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi1g1v0388700.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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