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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0394100 |
| Transcript ID | LotjaGi1g1v0394100.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Plant calmodulin-binding-like protein; TAIR: AT5G39380.1 Plant calmodulin-binding protein-like protein; Swiss-Prot: sp|Q8IID4|DYHC2_PLAF7 Dynein heavy chain-like protein PF11_0240; TrEMBL-Plants: tr|K7KTQ3|K7KTQ3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0394100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:87855339..87859216) extracted from Lotus japonicus Gifu genome v1.2.
AAAAAGGAAAGGGTCAACTCTGCAACCCACATCCCGGTAATAAAGGAACATAGAACAACCATTTGTTTTGATTTAATGGC CAGGAATTCAAACACCTGCACTGCCTTCACAAACACCATCACCATTTTTGAGTTTATGCGTAATTTGCGCTCCATTTATG ATATTATTAAGCATCCGAAACCCCCTCTTTCTAATATTTTTATGATCTTCCAACCAATGTTTTGTTTTCGTTTTGCTCCT TTCTTCATATATTCTCATCTTTCAAAGCAAAGGCAATTTCATTTGCTTTGTGCTCACAAATTCACTTTTCCATGAACTCT CTTTTATCAAGGTACGTTTTCTGAACCTGAATCTTCTCTGATTTGGTTGTCTCAAATTTACTCTTCCTATATTGAGTTGA ATTTGCACAAAGCCCTTGAATATTGCATCCTTTGTATATCTATCATTGTGTCACATGTCCATTGGTTGCTTTCTTCTCCT TTTTTCCATATCAAATAGATTTTGTTAAAAACATCCCTGAATAAAGATCAATTGATCATAATCATTTGACAAATACTTTA TGTTTCCTTGATTTTTTATCTAATGAAAAAAACTCACTTGATCTTTCTTCATGTACAAATAATTTGTTAGAGTAAATCTT CTGAGGAAGATGGATATTCCTCAAACAATAATACATTAACGTGGATGATATGAAAAATGAAGAGATAGGCATTCTTGGGC CAAAAAGTATAATAATGACATGCTTTAATTTCATTTTACACCAGGGAGGAACCTTTCCTTAAGCCCTATAAAGAAAGGGA ACCTTTCTTATTTATTAATGAGTTAGGCTATAGGCTTTTCTTTTCTTTTCTTTCATTCTTTTTTGGGTGTTAAAGTTGAG AACTTGAGATAGGCTTTCCACGTTAATCCATTATATCCAACTAGTGGAGGCGTGGAGCACATGTTATGTCAAACCTCAAA AGTATAGACCACTTGTTATAATTATGAAAATTAATTGTGATTATGCATGACCATTTTTTCTTTATGAAATTCTCATTGTC TAGCCAACACATTAAAATTCTGAAATACCAACGGAAGTTTAGTTTAATTCGTATCTGTTTGATTCATCTTAAACAAGTTT TTAAGTTCGAATATTGTATTTCATTGAAAATGCTAACTTCACAAGAATTTGGATGCTCATGACTCGAACAAGATTGTATC TTGTGAATGACATTTGTATTTAAAAAACAAAATCTGGAATTGTTTCATTAAAATCTTGATTAAGGGATGGACTTATCCCA TTGTATTTCCAGATGTATTGATTTGTGCACCCTCTCAATTAGATTTGTGTATTCATTAATTGGTTTTCACTTATTTAACT CAACTTATTCATAATAAATGTGAAGTTTCACCACATAAACTTGAATTTTTACATCAAGTAAAATTTAGTGCAATATGGAG AGTCATAGACATCCTTTACATCCAACATAATTGGGTTTGATTTTTGCTAATATGCAGGTTCTCTTGAACAAATTATTAGC TTGAGACATCTAACCATACATGGCAACAAAAACTAAAGACACTAGTGCTACAGGGAAGGAGAAGAAGCCCTCATCTTCTA TCCCCATCACAAGCACCAAAAAGACCACCAAGCCCTCATCCACAGCAAGCCCATCAGACAAGCCCACCTCAAGCCCATCA GACAAACAAATCCCAAACTACCTCAAGCCCACAATCAGCTCACGCCTTGAGTCCCAGTCCTTCAAGCTAGCCAGCAAGAG TGATGCTCAAAACAAAGCCACTCTCAACAGAAGAAGGTCCTTTGACAAACCACCATCACCTTCAGGCCCAAAACAAAGAC AGCACACTCTTTCAAGGCAAAACAATGCCCTTGTGTCCCCTGGCCCTAGAGACAGGGTCCTAACTCGATCTTCCACCACT CTTCCAGTGAAAACCATAAACACTACCAAACCTGTTTCAGAGAGGAATTCAAAGACTTCTAAAGAAGGAAAAACTCACCC TCTGGTTGCCAAGAGTGCAAAGAAGAGCAGCCCCATTATTTTCACTCCAGCAAATAAGAAGGTAGCTGCTGCTGGTGCTT CTGCTGCTAAATCGAAGAAAACCTCAAAGACCATCACTGTTCCTGAAACCACAGAAGGGACCCATGTTGATGAACCTGAG GCAGAAGTTAAAGAAGCTGTGAATGAAGAAGAGATTGCAGAAGTAGAAAAAGTGGAGGATAAAGAACAAGAGGCTGAAAA TGTACCTGAAACCCCACCTCATGTTGAATCTGAACCTGAACATGAGCATGATCAAAAAATTGAAGAGTCTGAACCTGAAC ATGAGCATGATCAAAAAGTTGAAGAGTCTGATCAGCCTCAAATTCAAGATGATCATGATGAGAAGGTGGTACCTACTGTG TCAGAACAAGAAGAAGAAGAAGCAAAAGAAGAGAAAATCATCAAAGATGAGCATGAAGAGGTAGAGAATACAATCCAAGA GGAAAGCAACATTGATGAGAGTCAGCCAGAAATTAATCATTCAGCCAATGAAGAAGTTGAGGTCAAAGAAAAGGAAGAAG AAGAAGAAGGTGGGGTTATAACAGAAGAAGATCATAAAAATGAGACCACCAATGAGGAAAAGACAGAGGAAGAAGAGAAG GAAGGGGTTGAATCAGGAGAAACAAGTGAAGGGGTTAAGTTAACAGAAGGAGTTGAAGAGGGTGATGAACAGAGTGAAGC TAAAGAAGAAGCTAAAGAAGAGGGTGATGAACATAGTGAAGCTAAAGAAGAAGCCGTGGCAGAGTCACCAAAGCCAAATC AACAAACAGCTTCTGTTCATGGTAAGAAAGAGTCTCAGGTATCAAATGATGTCATTGAAGAGACTGCGAGCAAACTATTG GAGGCGAGAAAGAACAAGGTGAGAGCTTTGGCTGGTGCATTTCAGACTGTTATTGATTATCAAACCAAATGAAACAAGAC ACTTTGTGTGCATTTGTTGTGAGACTGAGACAGAATGAAGAGAACACATCTCTTTGGTCTCTTCCAAACCTGAAAATTAA GGAGGTGCTGATGTGTTCCCTCCAATCATTTGTTCATAAACATGTGTAATTAATACCATTGTAATTTATATAATTTAGTC TTTGGTCAAATTAATTAACCCCTGGGATTGTAATTTTCTTTTATATATATGTACAATGATATTTTCTTTTGTTTTGTTAT TGTAACAAAAAAAACTATTTTAGGGACAAACAATGAACAATGTATTGATCAATTGGTAAATAAGCTAAAGTATTCCATAA AACCCTAGGAACAAAAACAATTGCCTTGTTCCCCAAGATTTCCTTAGTCACCCTAAAAACAAACAGTATGTTACATAATA GATATTTTTTAGACAAGGATAATATGTATCCATCATAAACATTACAAATTGATTCACTTAGAGTAGATGCTCGCTCACAC TAAACAATAAACTTCTGGTTATAAAATATGTTTGATTCACATAATTAATGATCAAACCCCCGACCAAATAATTAAGAGAC AAAATGAAGAACCACCGCGCCCAATTAGTGGTTTGTACTTTAGCTAAGAATAAGCTCTTCTCTCCAAACTTAGGTGATGC CGAAAGTTGGCAATAAAAATCTCTGCCCTTTTATCAATATCATCTTCTGAAGTATAATTTGTTGTTCTTCTATATCGTAC CATATGATCTCTTTTGATTTGTTTATCCTCAAGGATCTTTCGCAAGCCCATTTGATTATTGAACAAGCTGCACCGTTTTT GTTTTACACTTTTGGACACATTGGAATTGAGTTGCCAAGAGTTCAATAGAGACTTCAGTTTCTTCAAAGGTCTCTGTAAT TGTTTAATAAGTGGTGAAGATTTCTGCTTATCCATTTG
CDS sequence (LotjaGi1g1v0394100.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCAACAAAAACTAAAGACACTAGTGCTACAGGGAAGGAGAAGAAGCCCTCATCTTCTATCCCCATCACAAGCACCAA AAAGACCACCAAGCCCTCATCCACAGCAAGCCCATCAGACAAGCCCACCTCAAGCCCATCAGACAAACAAATCCCAAACT ACCTCAAGCCCACAATCAGCTCACGCCTTGAGTCCCAGTCCTTCAAGCTAGCCAGCAAGAGTGATGCTCAAAACAAAGCC ACTCTCAACAGAAGAAGGTCCTTTGACAAACCACCATCACCTTCAGGCCCAAAACAAAGACAGCACACTCTTTCAAGGCA AAACAATGCCCTTGTGTCCCCTGGCCCTAGAGACAGGGTCCTAACTCGATCTTCCACCACTCTTCCAGTGAAAACCATAA ACACTACCAAACCTGTTTCAGAGAGGAATTCAAAGACTTCTAAAGAAGGAAAAACTCACCCTCTGGTTGCCAAGAGTGCA AAGAAGAGCAGCCCCATTATTTTCACTCCAGCAAATAAGAAGGTAGCTGCTGCTGGTGCTTCTGCTGCTAAATCGAAGAA AACCTCAAAGACCATCACTGTTCCTGAAACCACAGAAGGGACCCATGTTGATGAACCTGAGGCAGAAGTTAAAGAAGCTG TGAATGAAGAAGAGATTGCAGAAGTAGAAAAAGTGGAGGATAAAGAACAAGAGGCTGAAAATGTACCTGAAACCCCACCT CATGTTGAATCTGAACCTGAACATGAGCATGATCAAAAAATTGAAGAGTCTGAACCTGAACATGAGCATGATCAAAAAGT TGAAGAGTCTGATCAGCCTCAAATTCAAGATGATCATGATGAGAAGGTGGTACCTACTGTGTCAGAACAAGAAGAAGAAG AAGCAAAAGAAGAGAAAATCATCAAAGATGAGCATGAAGAGGTAGAGAATACAATCCAAGAGGAAAGCAACATTGATGAG AGTCAGCCAGAAATTAATCATTCAGCCAATGAAGAAGTTGAGGTCAAAGAAAAGGAAGAAGAAGAAGAAGGTGGGGTTAT AACAGAAGAAGATCATAAAAATGAGACCACCAATGAGGAAAAGACAGAGGAAGAAGAGAAGGAAGGGGTTGAATCAGGAG AAACAAGTGAAGGGGTTAAGTTAACAGAAGGAGTTGAAGAGGGTGATGAACAGAGTGAAGCTAAAGAAGAAGCTAAAGAA GAGGGTGATGAACATAGTGAAGCTAAAGAAGAAGCCGTGGCAGAGTCACCAAAGCCAAATCAACAAACAGCTTCTGTTCA TGGTAAGAAAGAGTCTCAGGTATCAAATGATGTCATTGAAGAGACTGCGAGCAAACTATTGGAGGCGAGAAAGAACAAGG TGAGAGCTTTGGCTGGTGCATTTCAGACTGTTATTGATTATCAAACCAAATGA
Protein sequence (LotjaGi1g1v0394100.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MATKTKDTSATGKEKKPSSSIPITSTKKTTKPSSTASPSDKPTSSPSDKQIPNYLKPTISSRLESQSFKLASKSDAQNKA TLNRRRSFDKPPSPSGPKQRQHTLSRQNNALVSPGPRDRVLTRSSTTLPVKTINTTKPVSERNSKTSKEGKTHPLVAKSA KKSSPIIFTPANKKVAAAGASAAKSKKTSKTITVPETTEGTHVDEPEAEVKEAVNEEEIAEVEKVEDKEQEAENVPETPP HVESEPEHEHDQKIEESEPEHEHDQKVEESDQPQIQDDHDEKVVPTVSEQEEEEAKEEKIIKDEHEEVENTIQEESNIDE SQPEINHSANEEVEVKEKEEEEEGGVITEEDHKNETTNEEKTEEEEKEGVESGETSEGVKLTEGVEEGDEQSEAKEEAKE EGDEHSEAKEEAVAESPKPNQQTASVHGKKESQVSNDVIEETASKLLEARKNKVRALAGAFQTVIDYQTK
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 470 | 470 | 4.5E-63 | – | |
| PANTHER | 1 | 470 | 470 | 4.5E-63 | – | |
| MobiDBLite | 1 | 161 | 161 | - | – | |
| MobiDBLite | 14 | 78 | 65 | - | – | |
| MobiDBLite | 94 | 112 | 19 | - | – | |
| MobiDBLite | 119 | 141 | 23 | - | – | |
| MobiDBLite | 142 | 156 | 15 | - | – | |
| MobiDBLite | 174 | 437 | 264 | - | – | |
| MobiDBLite | 184 | 198 | 15 | - | – | |
| MobiDBLite | 200 | 218 | 19 | - | – | |
| Coils | 208 | 235 | 28 | - | – | |
| MobiDBLite | 225 | 312 | 88 | - | – | |
| Coils | 287 | 308 | 22 | - | – | |
| Coils | 347 | 367 | 21 | - | – | |
| SMART | 353 | 466 | 114 | 0.0024 | ||
| Pfam | 359 | 465 | 107 | 5.3E-13 | ||
| Coils | 391 | 415 | 25 | - | – | |
| MobiDBLite | 398 | 414 | 17 | - | – | |
| MobiDBLite | 416 | 437 | 22 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Calmodulin binding | Interacting selectively and non-covalently with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states. |
Expression pattern of LotjaGi1g1v0394100.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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