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LotjaGi1g1v0397900.1

Overview

Field Value
Gene ID LotjaGi1g1v0397900
Transcript ID LotjaGi1g1v0397900.1
Lotus japonicus genome version Gifu v1.2
Description Basic-leucine zipper (BZIP) transcription factor family; TAIR: AT5G24800.1 basic leucine zipper 9; Swiss-Prot: sp|Q9FUD3|BZIP9_ARATH Basic leucine zipper 9; TrEMBL-Plants: tr|B3IX29|B3IX29_LOTJA Transcription factor bZIP; Found in the gene: LotjaGi1g1v0397900
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr1:88440660..88447280) extracted from Lotus japonicus Gifu genome v1.2.

CCAAATGAAAGTTTGAGCTATATTAATTAATTTTTTCCAATGATACCCTTATTAATTCTAACTTGTAAAATGTGCCTCAT TAATTATTCTCTCTCTTTTCTACTTTCTAACACTAATAACAAAGGGTAATTTTGGAAGTTCATTTTAATTTAAGACAAAT TTAATGCATTTTATCTAGTTTAACTACATTTCTTAAACTGTGTGAATTTTTTTTTTGTTGCTTATAAATAGGACCGGAGG GAGTAATACGGTAGTGATGTCTCTAGCCACAAGGTGACTCGACTTTTATTGTGAATTAAGATGGAGTGTGAATGAAATAT TATATTTTATTTTTTTATTAGTTATTAATTAAAAAAGAAAAGAAATATCTTGTGTTGTGTCGAGGCTCTAGTATTTATAC CCGTGGAGCTGCTTCCTTCATTCCCTTTTACCTCTTTCTCTATTCTCACTAATTAATATTCTCCCCCCCCCCCTCTCTCT CTCTCTCTGTCTCTCCGGTGTGGCGGCGCTGATGGCTTCAAGTGAGACTGCAGATCTGGACGAGTTTCTCATCCTCGATT ACGACCACCTCCGCTATCCCGACACCGCCGATGCATTATTCAACACCGTTTGCTCCGCCGCGTTCCACAACCTCCTCCCC GTAAGTCTTCTCTCTCACTCTCTCCTTCTCTCTTTCTCTCAAAACTAACCACACTCCATGACGTGACATGGCGTGGCCAC TAGCACCTTCAACCGCTTCCAGTTTCGCCCATAGCTTCCTCAACACGCCAATACTACTTAACAATAGTAACAACAATAAT AATGATTCTTTTCATTAAAATAATATTAATAATGATTCTTTTTCCTAATAGAATAATAGAAAAAAGACAAAATAAAATTA CAAATATTAGGTACTACATGGTTTGAAATTTTATATGTTGAATTAATTACGCAGCCATTGAATTATTATGAAAATAGTGA AGAAGGTGAATGAGTGTGACTCACACATACATAGTTACATACCATGCTTGTGATCTGATGAGGAGTTGCTGATGTGGACT GCTTCATCGCATCAGTGTGTTAGGAACTTGTGTGAACGCAGTACTCTTTGCTGATTTTATGGGCCTTTATTTTTTGTCTT GGCTTACTTTTTTAGTGGGCCCATAATATTCTTTGCATTGTAAACAAACCCATAATATGTGTTACCATGTAAAATTGTTA ATCTGTTATCGAGGGTGTGTCTGGTTTCAATTCTGAATACAGTATATAAGATTCATCTTTTTAAGAGCAACGATTCGGCG CTTTAATGTAAAAAAATTATATCATGTTGTTATATATCATTCTAAATGACTAAGTAAAGTGTTTAGTAAGATTTATTATG CTTTTTAATTAAAAAAAATACTAGTATATGAATTTTTTACAACGTTACGGATTGATTCCTAAATTACTAGCCTCTATGTG CTTTTGAAAAGAAGCTCTAGTCATATAAAGATTTTAGCTATTCAAATATCTGAGTAAAGTCCTCTCATATTTCAGGGTCA TTAAATTAGATTTTATATCAAAATTGTACTAAAAAAGTTGTTATATTTCTCCCTGATTAGAGAATTGACGTGGCATGTAG AAAATAAAGGAAAATGACTAGTGTGTGTAGCTGACATGAATGAATGAAGATCGAGGGTGAAATTTTCACTATATTAAGTT TAATGGCTAATTTGATGTTGACTCATAAATGTTCAATGGAAAGATCAAAGAGCTGAAGTCAATATCAATCTTCCATATGA AAGTTATTTTTACTGTTTTTTATAAAGGATTGACAAGCAGAAAGGATTATAAAAGTTGTATCCATCATTTCACCAGTAAA GTTACTTGATTATAAGTTTTTTATTTGGTTAAAATATTCATATAAGTTTATGTATAATACAACTAGTTAATAATTAATCT GACAAAAATTCTGTATAATCTGTTTTAAGATTTTTTCAATACTACAACTTGCCTTCAGCTGTGCATCAATTTTTGTTTTA CTACTATTATTTTTTTAAAGTTCTAGTACCACTTCCATCTACCCACGGGTTGAAAACCTAAAATTTAAAAAGAGATAAGA AAAGTGTGTGAAAAGTTTTCAACAAAATGATAAAGCAAATAACTACACGAAACCATTTTATGCATTAAATAAAGTGCAAG TAGTTTTCAAGATTTTAAAATTAATTAACGCTTAAGTTTATGAAACATCCGTCAACTTCGTCTATTCAAGTGGCTTAATT GTCCTGAAAAAATTATGAGTTTAATGATTATGAACTGTTAGTGTAACAATGTTTTAACATACATCTAATAATTGACTGGC ACGTATTCAAAAACATTTATGTTTATCTTTATTTTAATTAAATTAAAAAATTATTTTCTGATCTGGCAACACATTATTGG ATGTATGTATAGAAAATGTTTTCACTTGCATTATCATTAAATTAAAAAAATATTCTATTCAAAAAAAAAATCAAAAATTA TTAGGGGAGAAATTGTCTATAAATATTAGTATTTTTATACATAAAAGAGAACCCTGATTACTTTTTTTTTTTTGAAATGC TGATTATTTTCAAACCACTAGATTTATCTGTATGTATACCCAATAATATTACTATTGGGCTGAATTTGCGCATATTTCCT TGAAATATTCCATCACAAGCGCAAGAGGTGTCAAAATACTTGCTTTGTATCCTTTGAGGGCCTTTGGCCCATTGTAATAT CATTCTATGACGTGTTGACAAAAAAGAGAGTGCTAAGTGGTGTTGGCAAAAAACGAAAACAGAGAATAAGAGGTGACAAC TTAATAATAGCAATAATAAAAATAATCTTAGTAGTAGAAGTAGGTTCCAACTTCCAATTAAGCCTTTGACATCATTTGAT TGATAATATTACTAAGTGCTTGTTTGGAAATTCTTTCACAATTGATTTTATGCGACAATCAATTTCGTAGAGAAGTTTCC GTTAGTAGCTTCTAAGTTTCCGAATTGATTACAAGGTAAGGTAAGGTAAGAGATGTTGATCCTAATATGCTCTAAAATGA TTTAGTACAAATTATGTTTCAGCTTATGCATCCTTTGATCTATAATTGCAGGATGTGGTGAGTTCATTTTCAACTTGTGG TGGAGTAACAGTCACAGACACCCTTTACTCCCAAAAGCTCACTCCCAAATGTTCCACCGTGACTGCTACCAATGACTCTC AGTCATCAATTTGTGGTATGGATTATGAATGATATAGGGAAATATTATGCATATTCTATAGTTATCATTTATTAATTAGC ATACTATGCATATTGTTGCTATTGGAGCACTGAATAGAAGTATATGGCTTGTAAAAAAATAGTTAATTGAAGTTTTGGAT TGAATTACTAATTGGGAATGCAGTTGGAAGTCCAGTGTCAGCTAATAAGCCAAACATGGGAGGAGAGAATCATCTGAAAG GAACTTCAAGTGGTTCCTCCGACCGGTCTGATGAGGATGATGATGAAGCAGGTCCCTGTGAACAAAGCAATAATCCACAA GATGTCAAGCGCCTTAGAAGGTATATTTATATATATGTTAAAATGAAATCAAACACTTGAAATCATGATTTTCATGATGT TCTCACTGATATAAATTTTAATGATATATATTATGGTAATTTCAGGAAGGTTTCGAATCGTGAATCTGCGAGGAGATCAA GAAGAAGAAAACAAGCTCATTTGGCTGAACTTGAGACACAGGTAAATTAATTATACTGTGATTGATCAGCTAATCATCTT AGAAGCAAAAGACTTCAATTGTTATAAGATGATATATGGAATGTTGCTACTAGCTCTTTATGAATCTCTGTTTTAGAAAT TGAAGCATCAATTAATATCATTAGTAAGATGCAGAAGAAAACTATCATTTTCTTCCCTATTGGCTATTGAACAATGCACT TTTCAGGTTGAAAAACTGAAGCTGGAAAATGCAACCCTGTACAAGCAGTTCACAGATGCTAGTCAGCAATTTCGCGAGGC GGATACTAATAATCGAGTGCTCAAATCCGGTGTAGAAGCTCTGAGAGCTAAGGTATGAGGTTAATTCTGGCAAAATTATT CTATCTAATCATGTTGGAGAAAATTGAAACTTTTATTTTTAGATGTTTGAATTCTGACGCACAGAATCGGCTCGTAGAAA GTTTCTCTCTAAAACTGATTTTGCTGTTCACAGAATTCATGTGACTGAGGAAGTTTGTGTGTGCTTTTAGGTGAAATTAG CTGAGGACATGGTGACTAGGAGCTCTTTCACCAATCAGATTCTTCAGAATCCATGTCAATTGAGCACCCCACCACAACTG AACTCTAATCTGAGAGGCATGGCACATGTTTCTCCAACCATCACTATCCATGGAGATAATGCCTCATATAATGGCATCAG AGTTGGTGAACAGAATTTTTCTACTCTTGGGTTTGGAAACTTGGATCACATGACCTACAACAACAACAACAATGTCAACA ATATTGGAGTTATAAGTGATGCTATGAGCTGTGTTACCATGTGGCCATGATCAAGGGTTTGATGAACAATTGGCTAGACT TTAATTGTAGCGTCACCAATTAGATGTCCAACTTTATATTTTAAGTCTTGTCTATGTGATTAGTGGGTTATATATGTGTA TGTTATTGTCTTGGGGTGGTTCCTCTTTATCATATGCTAATTAAAATAGTGTCATTTCTCCTTAAAAGAGCTTAAAGGAA GGTGAATTATTGCAGTGACTTTAATGAATGTTTGCTAGGCACGTGTATTTAAGATAATCAGTGTGAATAATTCATATTAT AAAATCAAATTGCACTCTCAAATCACAGATTTGAGTTATATTATCTTCATTTTAATACCTCAACATGCTCACACAAGATG GTGATAGAATATTCTATCATAATTCCCTTCAGATGGTTTTGGGTGAAACAAGACACCAATTTTGGACATGAAGAGGAAAT GTTGAGGACCTAACAGAGGCTTTGGTAAAGAAGATACAAAAGTTGGTGTCTGGTAGGGTCATGAGAAACTGTTAATGAAG GAAAAAATTCCACTTTATCTGAAACTCACTCTGGTTTTCTTGATGAGTAGTATATACATTTCAAATAAAGTCCAACTAAT TTCAAAAAAGAAAATATTATTTTTAAAAAATAATAACAAAATCAATATGATTTATCTTAATTATAATTCAAGTATCCAAC AATTAATAAGGGAAGCACATGAATGGTTTTACAGATATGACCAAAATGCCCAAGTATTCACAACCTGTTGTTATATGACT CCTACACTTTAACATGCTTACTTTTCTGCAATTTTCCAGGACATGCTGGAACACCAATTGGTGAGCTGACTTTTTCAATC ATATATGATACTTGAGCTGTGCTAGATCTTCGGCAACCAATGTAAACCTGGCCGACATCTTTAATAAGGATCAAACACGA CAAACTCATATAGCCGACCTCACTTAGTGAGATAAGACTTTGTTGCTGTTGTTTAAATGTGTAGGATAACAGAACAAACT AAAGTGTAATTAACTCTAGGAAGGTAAAAATCATGCAACTTGAACAGACATTTGCCTCCAAAATCTCAACAAAAAATGAA TGAAACAAGTAATGCAAAAAAAAACAACCTTCATATTTGATAACATAGAATGCTGGAAACAATGAATATACAATTAGCAG CTTCTCAATTACTCCTAAAATCAATGAAGAAATTGCTACGATCCCATCATCAATTCAAACTCAGTAAAATCAACCTTGCC ATCAAAGTTCAAATCCACAACCTTCACCATGCTTTCAATTGTGTTCATATCCCAACCTTTGTCCAATCCCAAGCAATCAA GCACCCTCTTCAGCTCCAAGGCATCAATGTATCCATCACCATCCTCATCAAAGATTTTGAAGGCTTCGCGCAGCAACTCG CTGCGCTTCGACATGTCCTCTAACTCACCAAGAACCTCTTCCACAGGCACTTCATCATCATGGAAACCACCCTCACAAGG TAGCTCAAATTCTGAGACCTTATTCTTATCCTCCTCAGAATTACCATACATTAAACCAAGCTTTTCAACCACTTTCCGAG CATTTTCCTTCTTGATTCTGCCATTGTTTTCCATGCCAAACACAGTGACAAGAGCACGGACCATCTTTTCATCAAGTTTG ATCATATCCTGGGCCTTGCAAGTAGGTTGATCAAGGTGAGAGATTGAGCTTGGTGGTGAGCTTTTGAGTGTTTTAAAAAA GTCCCCAATGAATCTGGAACATACTTCTGTTATACCCATTTGAGCCAATAGACAAAAAACAGTACTATATGATATGTCTT ATGAATAGTACTCTGTTATCTCTCTTGGTATGAAAAAAAGGAAAAACAAAAGAAAAGGATCGAAAGGCAACAAGCAATAG GAAGAAAAGGAACTGCAAGATTTTGGTGCAATGCTTAAACTTTTTGTGTGGCACTGCTTTTATAGTGAGATCAATGGAAT GAATGACACTCTTACTTGAATTGTAAATCATTCAAGTGCATGCCAATGTGTAGTGCAATTATGGATTAAACAATAACAAT AATAGTTGTATGCAGATGCAGGTAGTGTCATTATAGAGTTCCTAGGCAGCTTGGCATATAA
Download Genomic Sequence

CDS sequence (LotjaGi1g1v0397900.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGCTTCAAGTGAGACTGCAGATCTGGACGAGTTTCTCATCCTCGATTACGACCACCTCCGCTATCCCGACACCGCCGA TGCATTATTCAACACCGTTTGCTCCGCCGCGTTCCACAACCTCCTCCCCGATGTGGTGAGTTCATTTTCAACTTGTGGTG GAGTAACAGTCACAGACACCCTTTACTCCCAAAAGCTCACTCCCAAATGTTCCACCGTGACTGCTACCAATGACTCTCAG TCATCAATTTGTGTTGGAAGTCCAGTGTCAGCTAATAAGCCAAACATGGGAGGAGAGAATCATCTGAAAGGAACTTCAAG TGGTTCCTCCGACCGGTCTGATGAGGATGATGATGAAGCAGGTCCCTGTGAACAAAGCAATAATCCACAAGATGTCAAGC GCCTTAGAAGGAAGGTTTCGAATCGTGAATCTGCGAGGAGATCAAGAAGAAGAAAACAAGCTCATTTGGCTGAACTTGAG ACACAGGTTGAAAAACTGAAGCTGGAAAATGCAACCCTGTACAAGCAGTTCACAGATGCTAGTCAGCAATTTCGCGAGGC GGATACTAATAATCGAGTGCTCAAATCCGGTGTAGAAGCTCTGAGAGCTAAGGTGAAATTAGCTGAGGACATGGTGACTA GGAGCTCTTTCACCAATCAGATTCTTCAGAATCCATGTCAATTGAGCACCCCACCACAACTGAACTCTAATCTGAGAGGC ATGGCACATGTTTCTCCAACCATCACTATCCATGGAGATAATGCCTCATATAATGGCATCAGAGTTGGTGAACAGAATTT TTCTACTCTTGGGTTTGGAAACTTGGATCACATGACCTACAACAACAACAACAATGTCAACAATATTGGAGTTATAAGTG ATGCTATGAGCTGTGTTACCATGTGGCCATGA
Download CDS Sequence

Protein sequence (LotjaGi1g1v0397900.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

MASSETADLDEFLILDYDHLRYPDTADALFNTVCSAAFHNLLPDVVSSFSTCGGVTVTDTLYSQKLTPKCSTVTATNDSQ SSICVGSPVSANKPNMGGENHLKGTSSGSSDRSDEDDDEAGPCEQSNNPQDVKRLRRKVSNRESARRSRRRKQAHLAELE TQVEKLKLENATLYKQFTDASQQFREADTNNRVLKSGVEALRAKVKLAEDMVTRSSFTNQILQNPCQLSTPPQLNSNLRG MAHVSPTITIHGDNASYNGIRVGEQNFSTLGFGNLDHMTYNNNNNVNNIGVISDAMSCVTMWP
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

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Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR46408:SF11
28 303 276 1.8E-107 –
PANTHER
PTHR46408
28 303 276 1.8E-107 –
MobiDBLite
mobidb-lite
77 154 78 - –
SMART
SM00338
129 193 65 5.2E-14
IPR004827
ProSiteProfiles
PS50217
131 194 64 11.415
IPR004827
Pfam
PF00170
132 177 46 2.1E-12
IPR004827
SUPERFAMILY
SSF57959
133 183 51 6.27E-11 –
Gene3D
G3DSA:1.20.5.170
133 187 55 2.8E-13 –
CDD
cd14702
134 185 52 1.4345E-7 –
ProSitePatterns
PS00036
136 151 16 -
IPR004827
Coils
Coil
142 176 35 - –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0003700
Molecular function DNA-binding transcription factor activity A protein or a member of a complex that interacts selectively and non-covalently with a specific DNA sequence (sometimes referred to as a motif) within the regulatory region of a gene to modulate transcription. Regulatory regions include promoters (proximal and distal) and enhancers. Genes are transcriptional units, and include bacterial operons.
Subterm of
GO:0006355
Biological process Regulation of transcription, DNA-templated Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription.
Subterm of
Regulates

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Expression data

Expression pattern

Expression pattern of LotjaGi1g1v0397900.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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