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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0405800 |
| Transcript ID | LotjaGi1g1v0405800.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | DUF810 family protein; TAIR: AT2G25800.1 elongation factor Ts (DUF810); Swiss-Prot: sp|P35164|RESE_BACSU Sensor histidine kinase ResE; TrEMBL-Plants: tr|I1JUV8|I1JUV8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0405800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:89488216..89493754) extracted from Lotus japonicus Gifu genome v1.2.
AACAGTTTTTACCGTGTGTGCAATGTGTATGGTAGTAGACTAGTCCATACTCTTGACTCTCTCTCTCTTTTTCTATCATC CTCTTCTTCTTCTTCTCTTTTTTCTCACTGCAATAATGGCCCAGCTCTTCAGAGACCTCTCATTAGGCCAATCCAAGCGT GATTCCCACGCGCCGCCGCCAACAATAACAATGCCTCCCAAACCAATCGCCGACGACCTCCCCTCCCCACTCGGCCAACT CGCCGCTACTCTCTCCGATTCCGACCTCTCCCTCACCGCCTACGAGATCTTCGTCGCCGCCTGCCGCACCTCCTCCGGGA AGCCACTCAGCTTCGTTCCCAACAACTCCGACTCTCCGAGTCAAAACTCCCCGGCCTACCAGCGATCTCTTACCTCCACG GCCGCCAGCAAGATGAAAAAGGCGTTCGGCTTGAAATCGCCCGGGTCGGGTGGCCGGAAGAGCCCTGGCTCTTCCGGTTC CGGGTCGGGTCAGGGTAAGACGAAGCGGCCAATGACGGTTGGTGAGCTCATGAGGAATCAGATGAGGGTTTCTGAAGCCA TGGATTCGCGTGTGCGCCGTGCGCTCCTTAGAATCTCTGCTGGCCAGGTTACTCAACTTTTACCATTCCATTCACGTTTT CGTTTGAATTACTCTATTATCATCATGCATGTAGAAACTGGTGCTTGATCTGCCTTCAGTTGCTATTTTTTCATGTAAAT TTGTACTTGTTGATTGGTTTTCTCAATCGTGAAAAACCAGATTCGCTTGATCTGCTTTTGGATTCTTCCAATTGTGTGAG CTCAGCAGTGTAACGTTACTTTGTTGAAATGCTTATTGGTAGATTCATGTTGGAATTGAAATTGACAGTGGCTATGGCAT TTTGTGGTGTTTATTGCAGGTTGGAAGGAGGATTGAGTCGGTGGTCGTGCCACTTGAGCTGTTGCAGCAACTCAAGTCTT CAGATTTTACTGATCAACAAGAGTATGTGGAGTGGCAGAAGAGGACCCTCAAGGTTTTGGAGGCGGGTCTGATTTCGCAT CCTTACATGCCTCTGGACAAATCCAATTCTTCTGCGCAGCGGCTGCGACATATTATTCATGCTGCTATTGATAGGCCTTT AGAGACTGGGAGGAATAATGAGTCTATGCAGGTTCTTCGTAGCGCTGTCATGTCTCTTGCGAATAGGTCGTATGATGGCT CTCTCACTGATTCTTGCCACTGGGCAGATGGGATTCCTCTGAATCTCCGGCTTTATGAAATGCTTCTGCGGTCCTGCTTT GATGCTAATGATGAATCGTCAATTATTGAGGAAGTTGATGAGCTAATGGAGCAGATTAAGAAGACTTGGGGAATCCTTGG ATTGAACCAGACACTCCATAATCTCTGTTTTACTTGGGTTTTATTTCATCAGTTTGTTGCGACTGGCCAGGTGGATTTGG AACTGCTGTCTGTTGCTGATGGCCAGCTAGCTGAGGTTGCAAAAGACGTAAAGACGACAAAAGATGCAGAATACTCCAAA ATTTTGAGTTCTACATTGACTTCAATTTTGGGATGGGCTGAGAAAAGGCTTCTTGCCTATCATGAAACTTTTGATCGTGG AAACATTGAAACCATGGAGGGCATTGTCTCTTTAGGGGTAGCGGCAGCTAAGATTTTGGTTGAAGATATATCTAATGAGT ATCGCCGGAGGAGAAGAACTGAGGTCAATGTGGCCCGGGAAAGAATTGAAACTTACATCAGATCATCACTGCGCACTGCC TTTGCCCAGGTAAGTTCTTACTGTCTGCCACTCGCTTTTCCCTTTAGTAAACGGAGATAGATAGACTAGAGGTTTATGAT ATCCCGAGAAGGCAATAGGGCTTTAATAACTCTTACTGTAGTGCCTTTAATTTCTTACTTCTTTGTGCAATTATGTTGAT ATACAAAGTACAATTCTACGTGAGTGTGAATATGTGGAAAATTTGACCTCATATATTCAAAACATGCTACTGCTTAAATA TTCAAGGTCTAGCAGGCAAGATGAATTTTCTGAAATATGCTTGTTTTGCTGCTGTACAGATAATGGAGAAATCAGATTCA AGCAGGAGAGCTTCAAGGAATCAGCCAAATTCTCTCCCTGTCCTTGCTATTCTTGCAAAGGATGTGGGTAGCCTGGCAGT TAATGAAAAGCAAGTGTTCAGTCCAATATTTAAGAGATGGCATCCCTTGCCCGCAGGTCTTGCTGTGGCCACCCTCCACT CATGTTATGGAAATGAATTGAAGCAATTCATTTCAGGCATCACAGAGTTGACACCTGATGCTGTTCAAGTGTTAAGAGCG GCAGACCAATTGGAGAAAGACCTTGTGCAGATAGCAGTTGAGGATTCAGTGGACAGTGATGATGGTGGTAAGGCAATAAT CCGTGAGATGCCTCCTTTTGAGGCTGAAGGTGCAATTGCCAATCTTGTGAAAATATGGATTAAGACTAGATTAGACAGAC TGAAAGAATGGGTTGATAGAAATCTGCAGCAAGAGGTTTGCATTCATAATCTTTTCTCTTTTTGTGTGTTGATGATTTTC ATTATTACAGTAGAAACTCTTTAAATTAATAATGTCAGGGCCGGAGAAATTTATTAATTTAGAGAGTTATTAATTTATCG ATAAATTAATAATTATTAATTTAAAGAGTTTTTAAGTAATTATGCTGTACATACCAAACAAAAAGGCAAATTAGTCTATG CCTCTTAGAATTACGTTGCAGCGAACTTTGGGACTCAACGTAAATTAGTAACTACTGTGTTCATATGCATTGGAAATCAA TAATGACTTTTGAAGTACAGTAAATGTAAACAAGAGGAACAAATGTGTTCAATGTATTCTTAAAGGAAAACAGACAACTA TTGAATCATATTTCAATAGAGTGTAATATATTTTTTTCAGTTTCTATGAATTATTAATTTATGATTTTCTTGGGACCGAA AATTATAAAGGGATCTCCCGAAAAATTATTATCTTATTATTTTATCGAGTTTTTCAATTTTTTATATTGGCCCAAGTCGG GACCGGACAAATTTATTATTTTAGAGAGTTTATTAATTTACCGAATATTAATTTAAAGAGTTTCTACTGTACTTCATTAC CTACAAAGAATGTTGGGGATGGATATTTTGGTAGAATCAGACTCATGAGTTTATTGTCCATTACTGAATGTCATGAAGTC ATTGCCAAACATTTGTGAGTTGTGTGTTGTCTTTAGATCATGAGATTCTTTTAATTGATAAGTGGTAACGTATTATTAGC TCTATGCATGTGATTAATTTCTTTGTTCTGTTTATATGATGCATCAATTGATTGCCTTATATCTTGAATTAACCTAGTTT ACTGCATTTTCCTAGCTTTGGAGTCCAAACTCAAATCAGGAAGGATATGCCCCATCTGCTGTTGAAGTATTGCGAATCAT GAATGAAACTTTGGATGCATTCTTTCAGCTTCCAATACCAATGCATCCTGCATTACTTCCGGAAGTGATGAATGGCCTTG ATAGATGCCTTCAGTACTATGTTATCAAATCTAAATCAGGCTGTGGTAAATGATGTTCAGACTTCATAGTTTATAGATAA GCTCTGATATTTGATATCTTTAATAACTGTTGTTCTTTGTTCTAATATTCAGGATCACGAAATACTTTTGTTCCAACAAT GCCCGCGCTGACCAGATGCACTATTGGCTCAAAGTTTCAAGGCTTTGGGAAGAAGAAAGAAAAATCTCCAAATTCTCAAA AGAGAAACCCTCAGGTTGCAACAAATGGAGATAGCTCTTTTGGGATCCCACAGCTCTGTGTTCGCATAAATACTTTGCAA TGGATCTTGGGTGAATTTGATGTTCTGGAAAAAAGAATAATTACTCTTTTACGAAACTCTGAATCTGCTCATGCAGAAGA TTTTTCAAACGGATTAGCGAATAAGTTTGAACTCTCTCCATCTGCCTGTCTTGAAGGAATTCAGCAACTCTGCGAGGCCG CAGCTTATAGAGTTGTCTTCCGTGATCTAAGCCATGTTTTATGGGATGGTTTGTATGTCGGGGATCCATCATCTTCCAGA ATTGAGCCATTTATTCAGGAACTTGAGCGGAACTTAATGTACATATCAGACACCGTTAATGAAAGAATTCGCACGCGCAT TATTTCTGAAATAATGAGAGCTTCCTTTGATGGATTCTTGCTTGTATTGCTTGCTGGAGGCCCGGCTCGTGCCTTTTCCC GAAAGGACTCTCAAATCATAGAGGATGATTTCAAATTACTTAAGGAGCTTTTTTGGGCAAATGGGGATGGCTTGCCTTCT GAATTAATAGACAAGTTGTCAGCTACTGTGAGGTCAGTCCTTCCTCTTTTCAGAGCCGACACAGAGAGCATCATTGAGCA GTTTAGACGGTTAACACTGGAGACATACAAATCCAATGCTAGGTCTAGGCTTCCATTACCTCCAACTTCTGGACAGTGGA GTCCATCCGAACCAAACACATTACTACGTGTTTTATGCTATAGAAATGATGATTCAGCTTCTAAGTTTCTTAAAAAGACA TATGATCTCCCTAAGAAACTTTAACAACCTTGGGAACAGGTTAATGGAAATGGCAAACTTGGATATAAATGCAGCCGGAG ATGCATTCATGCTTAACTGTCTGCTTCTGCATGTATGTAGTACAACATAGCCTTAGCAGGTAAATTATCTGCATTGAACA AGATATACCGGCACATTCTCAGTTCGAAGGGAGGAAGCATAAATGTTGACCATCAGAATGAAAGGCTTGTTTGTGAAGGT AGTTGGATATTCTTTCTGATTCATTAATTTTTGGGAGATTATAGATATCTCAATGGTTTATTCTGTGTTTAGCTTAATTT GTTTTCTTTTTACACCTTATGAAAGTTCTCTTTCACTATATAAATTATATGAAAATGATGTCTATGTTCTGATTATTCTT TTGTTAATTTCCTTTGGATGGTGTTGTCCCTTATTTAATAGTATGAAATGCAGTTATGCAGGCATTGTATAGCCAATTTG TTGATTGATATAGTTTGTGCCATTATATATATTTTTGTATGAAAAGGCCGGCGTTGATTGTGTATATTGGGATTTAACAT TTGTGTAAATGCTAATTCTGAACTCTTAAATTTATATGTATATCTTTTGTCATAAAAGTGTTTGGTTTTTGGACATATCC TAATGAAGTTTTCTGTCGTGAGTGATGAGATGTGCCATGTGTGGACAGCTAGGGACACCGTTGGCTGCCTCATATCATGG AAGACTAGGTAAATGGCCAGAGCAACTGCCATTTTTTATTTTATTTTTTCACTTCACTGGGTTGGATTGAAGTTAATGGG GAATATTATTTGCCAATATTAAATTAAGCTACATTTTCGTGAAATGTACAAAAGGTATAATTTAAACTAATTTTTTAATG AAATATTTCAAGTTCAATGACTAAAAATTCAAAGAAATTTAAAATATAGAAGTTTGAAATTTTATAATTTGAAAATATTT AAATGTATTTAATATATAA
CDS sequence (LotjaGi1g1v0405800.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCCCAGCTCTTCAGAGACCTCTCATTAGGCCAATCCAAGCGTGATTCCCACGCGCCGCCGCCAACAATAACAATGCC TCCCAAACCAATCGCCGACGACCTCCCCTCCCCACTCGGCCAACTCGCCGCTACTCTCTCCGATTCCGACCTCTCCCTCA CCGCCTACGAGATCTTCGTCGCCGCCTGCCGCACCTCCTCCGGGAAGCCACTCAGCTTCGTTCCCAACAACTCCGACTCT CCGAGTCAAAACTCCCCGGCCTACCAGCGATCTCTTACCTCCACGGCCGCCAGCAAGATGAAAAAGGCGTTCGGCTTGAA ATCGCCCGGGTCGGGTGGCCGGAAGAGCCCTGGCTCTTCCGGTTCCGGGTCGGGTCAGGGTAAGACGAAGCGGCCAATGA CGGTTGGTGAGCTCATGAGGAATCAGATGAGGGTTTCTGAAGCCATGGATTCGCGTGTGCGCCGTGCGCTCCTTAGAATC TCTGCTGGCCAGGTTGGAAGGAGGATTGAGTCGGTGGTCGTGCCACTTGAGCTGTTGCAGCAACTCAAGTCTTCAGATTT TACTGATCAACAAGAGTATGTGGAGTGGCAGAAGAGGACCCTCAAGGTTTTGGAGGCGGGTCTGATTTCGCATCCTTACA TGCCTCTGGACAAATCCAATTCTTCTGCGCAGCGGCTGCGACATATTATTCATGCTGCTATTGATAGGCCTTTAGAGACT GGGAGGAATAATGAGTCTATGCAGGTTCTTCGTAGCGCTGTCATGTCTCTTGCGAATAGGTCGTATGATGGCTCTCTCAC TGATTCTTGCCACTGGGCAGATGGGATTCCTCTGAATCTCCGGCTTTATGAAATGCTTCTGCGGTCCTGCTTTGATGCTA ATGATGAATCGTCAATTATTGAGGAAGTTGATGAGCTAATGGAGCAGATTAAGAAGACTTGGGGAATCCTTGGATTGAAC CAGACACTCCATAATCTCTGTTTTACTTGGGTTTTATTTCATCAGTTTGTTGCGACTGGCCAGGTGGATTTGGAACTGCT GTCTGTTGCTGATGGCCAGCTAGCTGAGGTTGCAAAAGACGTAAAGACGACAAAAGATGCAGAATACTCCAAAATTTTGA GTTCTACATTGACTTCAATTTTGGGATGGGCTGAGAAAAGGCTTCTTGCCTATCATGAAACTTTTGATCGTGGAAACATT GAAACCATGGAGGGCATTGTCTCTTTAGGGGTAGCGGCAGCTAAGATTTTGGTTGAAGATATATCTAATGAGTATCGCCG GAGGAGAAGAACTGAGGTCAATGTGGCCCGGGAAAGAATTGAAACTTACATCAGATCATCACTGCGCACTGCCTTTGCCC AGATAATGGAGAAATCAGATTCAAGCAGGAGAGCTTCAAGGAATCAGCCAAATTCTCTCCCTGTCCTTGCTATTCTTGCA AAGGATGTGGGTAGCCTGGCAGTTAATGAAAAGCAAGTGTTCAGTCCAATATTTAAGAGATGGCATCCCTTGCCCGCAGG TCTTGCTGTGGCCACCCTCCACTCATGTTATGGAAATGAATTGAAGCAATTCATTTCAGGCATCACAGAGTTGACACCTG ATGCTGTTCAAGTGTTAAGAGCGGCAGACCAATTGGAGAAAGACCTTGTGCAGATAGCAGTTGAGGATTCAGTGGACAGT GATGATGGTGGTAAGGCAATAATCCGTGAGATGCCTCCTTTTGAGGCTGAAGGTGCAATTGCCAATCTTGTGAAAATATG GATTAAGACTAGATTAGACAGACTGAAAGAATGGGTTGATAGAAATCTGCAGCAAGAGCTTTGGAGTCCAAACTCAAATC AGGAAGGATATGCCCCATCTGCTGTTGAAGTATTGCGAATCATGAATGAAACTTTGGATGCATTCTTTCAGCTTCCAATA CCAATGCATCCTGCATTACTTCCGGAAGTGATGAATGGCCTTGATAGATGCCTTCAGTACTATGTTATCAAATCTAAATC AGGCTGTGGATCACGAAATACTTTTGTTCCAACAATGCCCGCGCTGACCAGATGCACTATTGGCTCAAAGTTTCAAGGCT TTGGGAAGAAGAAAGAAAAATCTCCAAATTCTCAAAAGAGAAACCCTCAGGTTGCAACAAATGGAGATAGCTCTTTTGGG ATCCCACAGCTCTGTGTTCGCATAAATACTTTGCAATGGATCTTGGGTGAATTTGATGTTCTGGAAAAAAGAATAATTAC TCTTTTACGAAACTCTGAATCTGCTCATGCAGAAGATTTTTCAAACGGATTAGCGAATAAGTTTGAACTCTCTCCATCTG CCTGTCTTGAAGGAATTCAGCAACTCTGCGAGGCCGCAGCTTATAGAGTTGTCTTCCGTGATCTAAGCCATGTTTTATGG GATGGTTTGTATGTCGGGGATCCATCATCTTCCAGAATTGAGCCATTTATTCAGGAACTTGAGCGGAACTTAATGTACAT ATCAGACACCGTTAATGAAAGAATTCGCACGCGCATTATTTCTGAAATAATGAGAGCTTCCTTTGATGGATTCTTGCTTG TATTGCTTGCTGGAGGCCCGGCTCGTGCCTTTTCCCGAAAGGACTCTCAAATCATAGAGGATGATTTCAAATTACTTAAG GAGCTTTTTTGGGCAAATGGGGATGGCTTGCCTTCTGAATTAATAGACAAGTTGTCAGCTACTGTGAGGTCAGTCCTTCC TCTTTTCAGAGCCGACACAGAGAGCATCATTGAGCAGTTTAGACGGTTAACACTGGAGACATACAAATCCAATGCTAGGT CTAGGCTTCCATTACCTCCAACTTCTGGACAGTGGAGTCCATCCGAACCAAACACATTACTACGTGTTTTATGCTATAGA AATGATGATTCAGCTTCTAAGTTTCTTAAAAAGACATATGATCTCCCTAAGAAACTTTAA
Protein sequence (LotjaGi1g1v0405800.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAQLFRDLSLGQSKRDSHAPPPTITMPPKPIADDLPSPLGQLAATLSDSDLSLTAYEIFVAACRTSSGKPLSFVPNNSDS PSQNSPAYQRSLTSTAASKMKKAFGLKSPGSGGRKSPGSSGSGSGQGKTKRPMTVGELMRNQMRVSEAMDSRVRRALLRI SAGQVGRRIESVVVPLELLQQLKSSDFTDQQEYVEWQKRTLKVLEAGLISHPYMPLDKSNSSAQRLRHIIHAAIDRPLET GRNNESMQVLRSAVMSLANRSYDGSLTDSCHWADGIPLNLRLYEMLLRSCFDANDESSIIEEVDELMEQIKKTWGILGLN QTLHNLCFTWVLFHQFVATGQVDLELLSVADGQLAEVAKDVKTTKDAEYSKILSSTLTSILGWAEKRLLAYHETFDRGNI ETMEGIVSLGVAAAKILVEDISNEYRRRRRTEVNVARERIETYIRSSLRTAFAQIMEKSDSSRRASRNQPNSLPVLAILA KDVGSLAVNEKQVFSPIFKRWHPLPAGLAVATLHSCYGNELKQFISGITELTPDAVQVLRAADQLEKDLVQIAVEDSVDS DDGGKAIIREMPPFEAEGAIANLVKIWIKTRLDRLKEWVDRNLQQELWSPNSNQEGYAPSAVEVLRIMNETLDAFFQLPI PMHPALLPEVMNGLDRCLQYYVIKSKSGCGSRNTFVPTMPALTRCTIGSKFQGFGKKKEKSPNSQKRNPQVATNGDSSFG IPQLCVRINTLQWILGEFDVLEKRIITLLRNSESAHAEDFSNGLANKFELSPSACLEGIQQLCEAAAYRVVFRDLSHVLW DGLYVGDPSSSRIEPFIQELERNLMYISDTVNERIRTRIISEIMRASFDGFLLVLLAGGPARAFSRKDSQIIEDDFKLLK ELFWANGDGLPSELIDKLSATVRSVLPLFRADTESIIEQFRRLTLETYKSNARSRLPLPPTSGQWSPSEPNTLLRVLCYR NDDSASKFLKKTYDLPKKL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 39 | 39 | - | – | |
| PANTHER | 3 | 979 | 977 | 0.0 | – | |
| PANTHER | 3 | 979 | 977 | 0.0 | ||
| Pfam | 46 | 743 | 698 | 3.1E-282 | – | |
| MobiDBLite | 73 | 135 | 63 | - | – | |
| MobiDBLite | 73 | 98 | 26 | - | – | |
| MobiDBLite | 113 | 129 | 17 | - | – | |
| ProSiteProfiles | 536 | 679 | 144 | 24.407 | ||
| MobiDBLite | 693 | 715 | 23 | - | – | |
| ProSiteProfiles | 810 | 920 | 111 | 22.478 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi1g1v0405800.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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