Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0405800 |
| Transcript ID | LotjaGi1g1v0405800.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | DUF810 family protein; TAIR: AT2G25800.1 elongation factor Ts (DUF810); Swiss-Prot: sp|P35164|RESE_BACSU Sensor histidine kinase ResE; TrEMBL-Plants: tr|A0A151TDK2|A0A151TDK2_CAJCA Uncharacterized protein; Found in the gene: LotjaGi1g1v0405800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:89488331..89492799) extracted from Lotus japonicus Gifu genome v1.2.
ATGGCCCAGCTCTTCAGAGACCTCTCATTAGGCCAATCCAAGCGTGATTCCCACGCGCCGCCGCCAACAATAACAATGCC TCCCAAACCAATCGCCGACGACCTCCCCTCCCCACTCGGCCAACTCGCCGCTACTCTCTCCGATTCCGACCTCTCCCTCA CCGCCTACGAGATCTTCGTCGCCGCCTGCCGCACCTCCTCCGGGAAGCCACTCAGCTTCGTTCCCAACAACTCCGACTCT CCGAGTCAAAACTCCCCGGCCTACCAGCGATCTCTTACCTCCACGGCCGCCAGCAAGATGAAAAAGGCGTTCGGCTTGAA ATCGCCCGGGTCGGGTGGCCGGAAGAGCCCTGGCTCTTCCGGTTCCGGGTCGGGTCAGGGTAAGACGAAGCGGCCAATGA CGGTTGGTGAGCTCATGAGGAATCAGATGAGGGTTTCTGAAGCCATGGATTCGCGTGTGCGCCGTGCGCTCCTTAGAATC TCTGCTGGCCAGGTTACTCAACTTTTACCATTCCATTCACGTTTTCGTTTGAATTACTCTATTATCATCATGCATGTAGA AACTGGTGCTTGATCTGCCTTCAGTTGCTATTTTTTCATGTAAATTTGTACTTGTTGATTGGTTTTCTCAATCGTGAAAA ACCAGATTCGCTTGATCTGCTTTTGGATTCTTCCAATTGTGTGAGCTCAGCAGTGTAACGTTACTTTGTTGAAATGCTTA TTGGTAGATTCATGTTGGAATTGAAATTGACAGTGGCTATGGCATTTTGTGGTGTTTATTGCAGGTTGGAAGGAGGATTG AGTCGGTGGTCGTGCCACTTGAGCTGTTGCAGCAACTCAAGTCTTCAGATTTTACTGATCAACAAGAGTATGTGGAGTGG CAGAAGAGGACCCTCAAGGTTTTGGAGGCGGGTCTGATTTCGCATCCTTACATGCCTCTGGACAAATCCAATTCTTCTGC GCAGCGGCTGCGACATATTATTCATGCTGCTATTGATAGGCCTTTAGAGACTGGGAGGAATAATGAGTCTATGCAGGTTC TTCGTAGCGCTGTCATGTCTCTTGCGAATAGGTCGTATGATGGCTCTCTCACTGATTCTTGCCACTGGGCAGATGGGATT CCTCTGAATCTCCGGCTTTATGAAATGCTTCTGCGGTCCTGCTTTGATGCTAATGATGAATCGTCAATTATTGAGGAAGT TGATGAGCTAATGGAGCAGATTAAGAAGACTTGGGGAATCCTTGGATTGAACCAGACACTCCATAATCTCTGTTTTACTT GGGTTTTATTTCATCAGTTTGTTGCGACTGGCCAGGTGGATTTGGAACTGCTGTCTGTTGCTGATGGCCAGCTAGCTGAG GTTGCAAAAGACGTAAAGACGACAAAAGATGCAGAATACTCCAAAATTTTGAGTTCTACATTGACTTCAATTTTGGGATG GGCTGAGAAAAGGCTTCTTGCCTATCATGAAACTTTTGATCGTGGAAACATTGAAACCATGGAGGGCATTGTCTCTTTAG GGGTAGCGGCAGCTAAGATTTTGGTTGAAGATATATCTAATGAGTATCGCCGGAGGAGAAGAACTGAGGTCAATGTGGCC CGGGAAAGAATTGAAACTTACATCAGATCATCACTGCGCACTGCCTTTGCCCAGGTAAGTTCTTACTGTCTGCCACTCGC TTTTCCCTTTAGTAAACGGAGATAGATAGACTAGAGGTTTATGATATCCCGAGAAGGCAATAGGGCTTTAATAACTCTTA CTGTAGTGCCTTTAATTTCTTACTTCTTTGTGCAATTATGTTGATATACAAAGTACAATTCTACGTGAGTGTGAATATGT GGAAAATTTGACCTCATATATTCAAAACATGCTACTGCTTAAATATTCAAGGTCTAGCAGGCAAGATGAATTTTCTGAAA TATGCTTGTTTTGCTGCTGTACAGATAATGGAGAAATCAGATTCAAGCAGGAGAGCTTCAAGGAATCAGCCAAATTCTCT CCCTGTCCTTGCTATTCTTGCAAAGGATGTGGGTAGCCTGGCAGTTAATGAAAAGCAAGTGTTCAGTCCAATATTTAAGA GATGGCATCCCTTGCCCGCAGGTCTTGCTGTGGCCACCCTCCACTCATGTTATGGAAATGAATTGAAGCAATTCATTTCA GGCATCACAGAGTTGACACCTGATGCTGTTCAAGTGTTAAGAGCGGCAGACCAATTGGAGAAAGACCTTGTGCAGATAGC AGTTGAGGATTCAGTGGACAGTGATGATGGTGGTAAGGCAATAATCCGTGAGATGCCTCCTTTTGAGGCTGAAGGTGCAA TTGCCAATCTTGTGAAAATATGGATTAAGACTAGATTAGACAGACTGAAAGAATGGGTTGATAGAAATCTGCAGCAAGAG GTTTGCATTCATAATCTTTTCTCTTTTTGTGTGTTGATGATTTTCATTATTACAGTAGAAACTCTTTAAATTAATAATGT CAGGGCCGGAGAAATTTATTAATTTAGAGAGTTATTAATTTATCGATAAATTAATAATTATTAATTTAAAGAGTTTTTAA GTAATTATGCTGTACATACCAAACAAAAAGGCAAATTAGTCTATGCCTCTTAGAATTACGTTGCAGCGAACTTTGGGACT CAACGTAAATTAGTAACTACTGTGTTCATATGCATTGGAAATCAATAATGACTTTTGAAGTACAGTAAATGTAAACAAGA GGAACAAATGTGTTCAATGTATTCTTAAAGGAAAACAGACAACTATTGAATCATATTTCAATAGAGTGTAATATATTTTT TTCAGTTTCTATGAATTATTAATTTATGATTTTCTTGGGACCGAAAATTATAAAGGGATCTCCCGAAAAATTATTATCTT ATTATTTTATCGAGTTTTTCAATTTTTTATATTGGCCCAAGTCGGGACCGGACAAATTTATTATTTTAGAGAGTTTATTA ATTTACCGAATATTAATTTAAAGAGTTTCTACTGTACTTCATTACCTACAAAGAATGTTGGGGATGGATATTTTGGTAGA ATCAGACTCATGAGTTTATTGTCCATTACTGAATGTCATGAAGTCATTGCCAAACATTTGTGAGTTGTGTGTTGTCTTTA GATCATGAGATTCTTTTAATTGATAAGTGGTAACGTATTATTAGCTCTATGCATGTGATTAATTTCTTTGTTCTGTTTAT ATGATGCATCAATTGATTGCCTTATATCTTGAATTAACCTAGTTTACTGCATTTTCCTAGCTTTGGAGTCCAAACTCAAA TCAGGAAGGATATGCCCCATCTGCTGTTGAAGTATTGCGAATCATGAATGAAACTTTGGATGCATTCTTTCAGCTTCCAA TACCAATGCATCCTGCATTACTTCCGGAAGTGATGAATGGCCTTGATAGATGCCTTCAGTACTATGTTATCAAATCTAAA TCAGGCTGTGGTAAATGATGTTCAGACTTCATAGTTTATAGATAAGCTCTGATATTTGATATCTTTAATAACTGTTGTTC TTTGTTCTAATATTCAGGATCACGAAATACTTTTGTTCCAACAATGCCCGCGCTGACCAGATGCACTATTGGCTCAAAGT TTCAAGGCTTTGGGAAGAAGAAAGAAAAATCTCCAAATTCTCAAAAGAGAAACCCTCAGGTTGCAACAAATGGAGATAGC TCTTTTGGGATCCCACAGCTCTGTGTTCGCATAAATACTTTGCAATGGATCTTGGGTGAATTTGATGTTCTGGAAAAAAG AATAATTACTCTTTTACGAAACTCTGAATCTGCTCATGCAGAAGATTTTTCAAACGGATTAGCGAATAAGTTTGAACTCT CTCCATCTGCCTGTCTTGAAGGAATTCAGCAACTCTGCGAGGCCGCAGCTTATAGAGTTGTCTTCCGTGATCTAAGCCAT GTTTTATGGGATGGTTTGTATGTCGGGGATCCATCATCTTCCAGAATTGAGCCATTTATTCAGGAACTTGAGCGGAACTT AATGTACATATCAGACACCGTTAATGAAAGAATTCGCACGCGCATTATTTCTGAAATAATGAGAGCTTCCTTTGATGGAT TCTTGCTTGTATTGCTTGCTGGAGGCCCGGCTCGTGCCTTTTCCCGAAAGGACTCTCAAATCATAGAGGATGATTTCAAA TTACTTAAGGAGCTTTTTTGGGCAAATGGGGATGGCTTGCCTTCTGAATTAATAGACAAGTTGTCAGCTACTGTGAGGTC AGTCCTTCCTCTTTTCAGAGCCGACACAGAGAGCATCATTGAGCAGTTTAGACGGTTAACACTGGAGACATACAAATCCA ATGCTAGGTCTAGGCTTCCATTACCTCCAACTTCTGGACAGTGGAGTCCATCCGAACCAAACACATTACTACGTGTTTTA TGCTATAGAAATGATGATTCAGCTTCTAAGTTTCTTAAAAAGACATATGATCTCCCTAAGAAACTTTAA
CDS sequence (LotjaGi1g1v0405800.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCCCAGCTCTTCAGAGACCTCTCATTAGGCCAATCCAAGCGTGATTCCCACGCGCCGCCGCCAACAATAACAATGCC TCCCAAACCAATCGCCGACGACCTCCCCTCCCCACTCGGCCAACTCGCCGCTACTCTCTCCGATTCCGACCTCTCCCTCA CCGCCTACGAGATCTTCGTCGCCGCCTGCCGCACCTCCTCCGGGAAGCCACTCAGCTTCGTTCCCAACAACTCCGACTCT CCGAGTCAAAACTCCCCGGCCTACCAGCGATCTCTTACCTCCACGGCCGCCAGCAAGATGAAAAAGGCGTTCGGCTTGAA ATCGCCCGGGTCGGGTGGCCGGAAGAGCCCTGGCTCTTCCGGTTCCGGGTCGGGTCAGGGTAAGACGAAGCGGCCAATGA CGGTTGGTGAGCTCATGAGGAATCAGATGAGGGTTTCTGAAGCCATGGATTCGCGTGTGCGCCGTGCGCTCCTTAGAATC TCTGCTGGCCAGGTTGGAAGGAGGATTGAGTCGGTGGTCGTGCCACTTGAGCTGTTGCAGCAACTCAAGTCTTCAGATTT TACTGATCAACAAGAGTATGTGGAGTGGCAGAAGAGGACCCTCAAGGTTTTGGAGGCGGGTCTGATTTCGCATCCTTACA TGCCTCTGGACAAATCCAATTCTTCTGCGCAGCGGCTGCGACATATTATTCATGCTGCTATTGATAGGCCTTTAGAGACT GGGAGGAATAATGAGTCTATGCAGGTTCTTCGTAGCGCTGTCATGTCTCTTGCGAATAGGTCGTATGATGGCTCTCTCAC TGATTCTTGCCACTGGGCAGATGGGATTCCTCTGAATCTCCGGCTTTATGAAATGCTTCTGCGGTCCTGCTTTGATGCTA ATGATGAATCGTCAATTATTGAGGAAGTTGATGAGCTAATGGAGCAGATTAAGAAGACTTGGGGAATCCTTGGATTGAAC CAGACACTCCATAATCTCTGTTTTACTTGGGTTTTATTTCATCAGTTTGTTGCGACTGGCCAGGTGGATTTGGAACTGCT GTCTGTTGCTGATGGCCAGCTAGCTGAGGTTGCAAAAGACGTAAAGACGACAAAAGATGCAGAATACTCCAAAATTTTGA GTTCTACATTGACTTCAATTTTGGGATGGGCTGAGAAAAGGCTTCTTGCCTATCATGAAACTTTTGATCGTGGAAACATT GAAACCATGGAGGGCATTGTCTCTTTAGGGGTAGCGGCAGCTAAGATTTTGGTTGAAGATATATCTAATGAGTATCGCCG GAGGAGAAGAACTGAGGTCAATGTGGCCCGGGAAAGAATTGAAACTTACATCAGATCATCACTGCGCACTGCCTTTGCCC AGGTAAGTTCTTACTGTCTGCCACTCGCTTTTCCCTTACAATTCTACGTGAGTATAATGGAGAAATCAGATTCAAGCAGG AGAGCTTCAAGGAATCAGCCAAATTCTCTCCCTGTCCTTGCTATTCTTGCAAAGGATGTGGGTAGCCTGGCAGTTAATGA AAAGCAAGTGTTCAGTCCAATATTTAAGAGATGGCATCCCTTGCCCGCAGGTCTTGCTGTGGCCACCCTCCACTCATGTT ATGGAAATGAATTGAAGCAATTCATTTCAGGCATCACAGAGTTGACACCTGATGCTGTTCAAGTGTTAAGAGCGGCAGAC CAATTGGAGAAAGACCTTGTGCAGATAGCAGTTGAGGATTCAGTGGACAGTGATGATGGTGGTAAGGCAATAATCCGTGA GATGCCTCCTTTTGAGGCTGAAGGTGCAATTGCCAATCTTGTGAAAATATGGATTAAGACTAGATTAGACAGACTGAAAG AATGGGTTGATAGAAATCTGCAGCAAGAGCTTTGGAGTCCAAACTCAAATCAGGAAGGATATGCCCCATCTGCTGTTGAA GTATTGCGAATCATGAATGAAACTTTGGATGCATTCTTTCAGCTTCCAATACCAATGCATCCTGCATTACTTCCGGAAGT GATGAATGGCCTTGATAGATGCCTTCAGTACTATGTTATCAAATCTAAATCAGGCTGTGGATCACGAAATACTTTTGTTC CAACAATGCCCGCGCTGACCAGATGCACTATTGGCTCAAAGTTTCAAGGCTTTGGGAAGAAGAAAGAAAAATCTCCAAAT TCTCAAAAGAGAAACCCTCAGGTTGCAACAAATGGAGATAGCTCTTTTGGGATCCCACAGCTCTGTGTTCGCATAAATAC TTTGCAATGGATCTTGGGTGAATTTGATGTTCTGGAAAAAAGAATAATTACTCTTTTACGAAACTCTGAATCTGCTCATG CAGAAGATTTTTCAAACGGATTAGCGAATAAGTTTGAACTCTCTCCATCTGCCTGTCTTGAAGGAATTCAGCAACTCTGC GAGGCCGCAGCTTATAGAGTTGTCTTCCGTGATCTAAGCCATGTTTTATGGGATGGTTTGTATGTCGGGGATCCATCATC TTCCAGAATTGAGCCATTTATTCAGGAACTTGAGCGGAACTTAATGTACATATCAGACACCGTTAATGAAAGAATTCGCA CGCGCATTATTTCTGAAATAATGAGAGCTTCCTTTGATGGATTCTTGCTTGTATTGCTTGCTGGAGGCCCGGCTCGTGCC TTTTCCCGAAAGGACTCTCAAATCATAGAGGATGATTTCAAATTACTTAAGGAGCTTTTTTGGGCAAATGGGGATGGCTT GCCTTCTGAATTAATAGACAAGTTGTCAGCTACTGTGAGGTCAGTCCTTCCTCTTTTCAGAGCCGACACAGAGAGCATCA TTGAGCAGTTTAGACGGTTAACACTGGAGACATACAAATCCAATGCTAGGTCTAGGCTTCCATTACCTCCAACTTCTGGA CAGTGGAGTCCATCCGAACCAAACACATTACTACGTGTTTTATGCTATAGAAATGATGATTCAGCTTCTAAGTTTCTTAA AAAGACATATGATCTCCCTAAGAAACTTTAA
Protein sequence (LotjaGi1g1v0405800.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAQLFRDLSLGQSKRDSHAPPPTITMPPKPIADDLPSPLGQLAATLSDSDLSLTAYEIFVAACRTSSGKPLSFVPNNSDS PSQNSPAYQRSLTSTAASKMKKAFGLKSPGSGGRKSPGSSGSGSGQGKTKRPMTVGELMRNQMRVSEAMDSRVRRALLRI SAGQVGRRIESVVVPLELLQQLKSSDFTDQQEYVEWQKRTLKVLEAGLISHPYMPLDKSNSSAQRLRHIIHAAIDRPLET GRNNESMQVLRSAVMSLANRSYDGSLTDSCHWADGIPLNLRLYEMLLRSCFDANDESSIIEEVDELMEQIKKTWGILGLN QTLHNLCFTWVLFHQFVATGQVDLELLSVADGQLAEVAKDVKTTKDAEYSKILSSTLTSILGWAEKRLLAYHETFDRGNI ETMEGIVSLGVAAAKILVEDISNEYRRRRRTEVNVARERIETYIRSSLRTAFAQVSSYCLPLAFPLQFYVSIMEKSDSSR RASRNQPNSLPVLAILAKDVGSLAVNEKQVFSPIFKRWHPLPAGLAVATLHSCYGNELKQFISGITELTPDAVQVLRAAD QLEKDLVQIAVEDSVDSDDGGKAIIREMPPFEAEGAIANLVKIWIKTRLDRLKEWVDRNLQQELWSPNSNQEGYAPSAVE VLRIMNETLDAFFQLPIPMHPALLPEVMNGLDRCLQYYVIKSKSGCGSRNTFVPTMPALTRCTIGSKFQGFGKKKEKSPN SQKRNPQVATNGDSSFGIPQLCVRINTLQWILGEFDVLEKRIITLLRNSESAHAEDFSNGLANKFELSPSACLEGIQQLC EAAAYRVVFRDLSHVLWDGLYVGDPSSSRIEPFIQELERNLMYISDTVNERIRTRIISEIMRASFDGFLLVLLAGGPARA FSRKDSQIIEDDFKLLKELFWANGDGLPSELIDKLSATVRSVLPLFRADTESIIEQFRRLTLETYKSNARSRLPLPPTSG QWSPSEPNTLLRVLCYRNDDSASKFLKKTYDLPKKL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 39 | 39 | - | – | |
| PANTHER | 3 | 996 | 994 | 0.0 | – | |
| PANTHER | 3 | 996 | 994 | 0.0 | ||
| Pfam | 46 | 760 | 715 | 3.8E-279 | – | |
| MobiDBLite | 73 | 135 | 63 | - | – | |
| MobiDBLite | 73 | 98 | 26 | - | – | |
| MobiDBLite | 113 | 129 | 17 | - | – | |
| ProSiteProfiles | 553 | 696 | 144 | 24.407 | ||
| MobiDBLite | 710 | 732 | 23 | - | – | |
| ProSiteProfiles | 827 | 937 | 111 | 22.478 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi1g1v0405800.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…