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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0422500 |
| Transcript ID | LotjaGi1g1v0422500.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Transcription factor; TAIR: AT1G75390.1 basic leucine-zipper 44; Swiss-Prot: sp|C0Z2L5|BZP44_ARATH bZIP transcription factor 44; TrEMBL-Plants: tr|I3SPW5|I3SPW5_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0422500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:91668094..91670431) extracted from Lotus japonicus Gifu genome v1.2.
CACCGCCGAGTGATCACGAGTACCGGCTGCCCGCACCGCCTCCACCGTCGGAGAACACAGCTCCGCCGCACGAGAAGCGA GTAACAAGGTGATTTCCCCAAACAAACAAATGACTACTCCAACAAAACAAAATTGTAGTAATCACACTAGCCCAAAAAAG CCCAATTACTGTTCCACCAAACCTCGGAGGAGATTCCGATGCTGCTCCTTTACCTTAAATCATTCACTTTTCCCCTTTTC TTTTCTTTCACTGTCTCCTCTCTGTGCCACCCTCAACCCTTTTCTATTATAAATTCACCCCCAAATTGCTTACACAACTT CCCCTTCTCTTCTCTTCTCTCCTCCGAAGAAGCTCTGTTCTCTGTTTCCCTGTGATCATCATCAATCTTAGGTGAGTTTC TTGTGTATTTCAATTTCAATTTTTAGATTAGTTTTCAATCTTGCCCCAATTCAAAACCTAATTTATTGAATTTTGATTTT CTCGCAGGAACCCTAACCCGATCATCAATTCAATTTCCAGGGTTTCGTTTGGATCTCGATGCTGAGAATCTATTGTGTTC ATGTTTAACATTCATGCCTTCTGTTATCAGTGAAATTTCCCGTTCCGGTTGCATGATAAACTCTTCCTTCAGGCGCAGGA CCCATCTAGTTCAATCTTTCTCCGTTGTCTTCCTTTACTGGTTCTATGTTTTCTCGTTAATCTGCACTTTCCTCTCGTAT ATGATTATATAATCTAGCTAGCTAGCTTAATCATCTACATAAATAAATCAGCTTTTTTAATTTTGCAAATTGTTAGGGTT TCTGGGTCCTGCGTCTTGATTAGGATTTTGGAGTTGTTTTGTTTAATCTTTGGTTTGGAAGTTGAATAATTCCCCGAACC GAGAAAAAAATCTAGTCTTTTTTTGTGTTGTGTGATCTTTGGTCATACACTCATATGGCGTCGTCGAGTGGAAACTCCTC TACCACCACCAAGTTTCAGAGCTCTGGCTCTGAGGGTGATTTGCAGATGGTGATGGATCAGAGGAAGAACAAGAGGAAGC AATCGAATCGCGAATCGGCGAGGCGATCCAGGATGAGGAAACAGAGCCACTTGGAGGATCTGACCAGCCAGGTTACTCAG CTGACGAAGGAGAACGGCGAGATCCTCACCAACATCAACATCACCTCACAGCAATATCAGAATGTTGAGACAGAGAATTC CATTCTGAGGGCTCAGATGGGAGAGCTCAGCCAGAGGCTTCAATCTCTGAATGATATCATCAATGTGATCAAGACAAGCG CTGCTGCCACCACCACAACCACAGGGTCCTATAATGAAAGGGAATTTTACCAAACAGGTGCACTGAACTTCAGCTATCTG AACCAGCCTATCACTGCTTCTGCAGACATTTTTCAGTGGTGAATTGAATTGTCTCTATCAAGAAAAATTGAGAAAAAGGG TCTCTAATTCTTGTTTGGTCTTGTTATGTTTTCTTCAAATGGGATTGCGTCATGGTGGAAGAAATTGGAATCAATAATTG TTGTACTGTGTTTGGGGGAGGCAATACTTAGTGGGAGATGAAATGATAGATTATCAAACACTAATCAAGTGCTTAATGAA AATGACGCAGTGGCTGGTCCTATTATGTTATGGTTAGGTCATTAGTAATTTTCTGTCGTGTCTATTATTTTGTTGTTAGT TGTTGTTATGATTATTATGGAGGAAAGGAAAGGGGATTTTTCTTTCTCTTTTGTGGTATAAAGAAAGAGAATGATTTAGG TGGTGTAAGGGTAATCTAGACTTAAATATGTTGTTATGGTATCGTTTGGTATGTTATGTTTGCTTAGTGTAAAAATGGTA CTTTTTAAGGATATTTATTTCTTAAAGCCCTATAATCCCTTTTGTAGAGTGAATCGACTTTTTCATCCCTAAAGTTTGAG GAATGTGTCATATTGGTGGTCATATTAAACTATATGTCACATAAGCATACTAGTACCACTGAAATAAGTATATTCTCTCT TTTAAGATTTTGATATTGAAAAAACGACTCAACTACAATTATATATGCGATCAATATATATGGAGTCAAAAGTTTTCCCA TGACACAAGTCTCTTTCTTCTTGGTGTAATATTTCACGACCTCATTTAGTGGAAACTCCACCAAATTTCAGAGCTGACTC TAGGGAGAATTTACAGCTACTGATGGATTAAAGAAACAAAAGAAAAGACAACAATCCAATTGTAAAATGATACGAAAGCC CAAATATTGATGGTCCTATGAGCTAAGGTGTCACTCTTCCTGAAGGACAACAATAATATTGAGGAATTGAATTCTTTCTT GGTAGGTGACTTTTAGGG
CDS sequence (LotjaGi1g1v0422500.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCGTCGTCGAGTGGAAACTCCTCTACCACCACCAAGTTTCAGAGCTCTGGCTCTGAGGGTGATTTGCAGATGGTGAT GGATCAGAGGAAGAACAAGAGGAAGCAATCGAATCGCGAATCGGCGAGGCGATCCAGGATGAGGAAACAGAGCCACTTGG AGGATCTGACCAGCCAGGTTACTCAGCTGACGAAGGAGAACGGCGAGATCCTCACCAACATCAACATCACCTCACAGCAA TATCAGAATGTTGAGACAGAGAATTCCATTCTGAGGGCTCAGATGGGAGAGCTCAGCCAGAGGCTTCAATCTCTGAATGA TATCATCAATGTGATCAAGACAAGCGCTGCTGCCACCACCACAACCACAGGGTCCTATAATGAAAGGGAATTTTACCAAA CAGGTGCACTGAACTTCAGCTATCTGAACCAGCCTATCACTGCTTCTGCAGACATTTTTCAGTGGTGA
Protein sequence (LotjaGi1g1v0422500.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MASSSGNSSTTTKFQSSGSEGDLQMVMDQRKNKRKQSNRESARRSRMRKQSHLEDLTSQVTQLTKENGEILTNINITSQQ YQNVETENSILRAQMGELSQRLQSLNDIINVIKTSAAATTTTTGSYNEREFYQTGALNFSYLNQPITASADIFQW
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 59 | 59 | - | – | |
| PANTHER | 1 | 155 | 155 | 3.1E-65 | – | |
| MobiDBLite | 1 | 23 | 23 | - | – | |
| PANTHER | 1 | 155 | 155 | 3.1E-65 | – | |
| SMART | 26 | 90 | 65 | 1.0E-17 | ||
| ProSiteProfiles | 28 | 91 | 64 | 11.001 | ||
| Pfam | 30 | 88 | 59 | 4.2E-12 | ||
| Gene3D | 30 | 82 | 53 | 8.2E-12 | – | |
| SUPERFAMILY | 30 | 83 | 54 | 8.13E-12 | – | |
| CDD | 31 | 82 | 52 | 3.60947E-18 | – | |
| ProSitePatterns | 33 | 48 | 16 | - | ||
| Coils | 46 | 66 | 21 | - | – | |
| Coils | 81 | 101 | 21 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | DNA-binding transcription factor activity | A protein or a member of a complex that interacts selectively and non-covalently with a specific DNA sequence (sometimes referred to as a motif) within the regulatory region of a gene to modulate transcription. Regulatory regions include promoters (proximal and distal) and enhancers. Genes are transcriptional units, and include bacterial operons. | ||
| Biological process | Regulation of transcription, DNA-templated | Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription. |
Expression pattern of LotjaGi1g1v0422500.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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