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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0428800 |
| Transcript ID | LotjaGi1g1v0428800.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | WEB family protein; TAIR: AT1G75720.1 WEB family protein (DUF827); Swiss-Prot: sp|F4I0N3|Y1572_ARATH WEB family protein At1g75720; TrEMBL-Plants: tr|K7KHR7|K7KHR7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0428800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:92379390..92381677) extracted from Lotus japonicus Gifu genome v1.2.
ATGACCATGAAAGGTGGTGTCATGCTGGTGAGGAAGGCAGAGATAGACACAAGGGCGCCTTTCCGGTCCGTCAAAGAAGC TGTCTCATTATTCGGGGAGAAAGTTCTAGCTGGAGAGGTCTATGCAAGTGCAAACAAGCGCAAACAGGTTCCGTGCATCA CTTAATCATGTATAGCATGTTTAATTGTGTAAACTTGTCTTGAATTATGTATAAATCATGAAACAAACATGCATTTATAT CTATAGAGCATTTACCTCATCTGTTCAGGACTGCTTTCATTTATCTGGTTTTCCCTGTCCCCATTTAGCTATCAATCTCT TAGAACCTTAAATATTTATTTTATAACTTCTCTTGTAAGGGGTAACAGAATCAGTTAGGTTGTTAGATGGTTAGAGTTTG TTTCGATTCTGTTAAGCAGTTGAAGCTGTTAGTCACATCTCATTGTTCAATTTTTGGAATCACTTTCATTTGTTTCATCT CAACGACTCTCTTATCTGACTCTATTAATTATATTCCGCTGTATATAACCTTTGGGGATTAGTATCTATTCGATATACAT TTATTGGAGACCACTGATATATGAGTCTATAAATGTTAATTCTTACAAATATTCCAAATAACCCGCATGAGGGTATCTTG AGAAGTCTCCCATTGTTCAGAGATATGATATAATAATTTCTTATAAAAGGTAGAGTAATCATCGTCCTATGATTATAGTT AGGTCCAAGGTTGTCAGACTCGTGAGTCTAAGCAGACTCGTTTTGGGTAGGTAGACTCGACTCATAGACTCGACTCGTAG ACTCGACGAGACTCGAGTCTAGCAGAAATGAAAAATTACTAAATATAACCCTGTCACATGAAGAACAAATATAAACATAT AATCTAATTATAAGAGCATCCAAGATGCATTTAATCAAATAAACTCAAAATCCAACTTCATAGTAAAGCAATTAAGCAAA GTTTAACAAAGTACCACACCATAAGTTAAGTAGTAAGTACCAAAACAAAGTACAATCAAAACTTTGTCAATATCATCAAC CAAATCAAGAAGAATCAACATCTGGGTATCATTAAGAATTGGGGATTTTTAAAAATTAGGGATTTTTAAGTTTAAAAAAA AAAAAAAACGTGACTCGCTGACTCGGTCATAACTCGCGAGTCTACCGAGTCTGGGCAAAAAACGAGTCTGCACTCGAGTC CACCCGTTTTGCCCACCTAGACTCGCGAGTCTGACAACCATGGTTAGGTCTAACTCAAATTCTAATTTTTATTTATTTAT TAAATCTCAAGTCCTTGTAGAAACTACAAACTAGAGCATAAAGTCTAAATTTAGAAGTAACAAAAAAAAAGTCTAAATTT AGAAGTCATTTTCAGTTCCTCCTTCCCACTATCCGATAAATTTTTATTTAATTTATATAATCTATACCTTTTATATTCCC TAAAGGAATTTTGAACATTTTTCTCCAAAGTTCATAAGTAGTCTGCTTGCCTGTAACAGGGTTTAAACTGCAAATGTGTA GTAAGTAGCTTAGTTGCAGACTGTGTCATGTGCTTGATTATATACTTTAATCTGTTCATTAATTATATACTTTACTTCAG AGAGCACAACAACACTTTAATTATAGTATGTTCGTTGTGTACCTTAAGCTTTCGCAAGGATTAAGTTAACAAATTAGTTT TCACCTCACTTTTTATGGTGTAAATTTTACACTTTGTTATAACTAATTCATAATTTGTTGCTCCATACATAGTAATTTGT TAAGCTAATTGTTTGCTAACTACACATTTATTTGTTATATAGCTACAGAAGGGAACAAATGAAAATGGGCTAGAGTCTTC AAAAATTGAAAACGTTGCAATTGAGCTAGAGGAGACCCGAGAAAATTTGCAGAGGGCTAAGGAAGAAAGCATGTTAATGG CGCATTGTGTGTCTTCTCTGCAGGAAGAGCTAGAACGCACAAAGCAAGAGCTCGAAGAAATGAAGCAAAAGGAAACAGAG AAACAACAACACCCTTTGGAACCAGAAATTAATGAAGATCTCAAGTTTGTTGAGAACTTTGAAATAAAAAATTCCAGGTT CGATGAAGAAAACATGGAGTTCCAGAAGAAAAGGTACGTGACATTCGCGAATCCACCATCTGTGTCTCATGTGATGCTGC CACCACAAGGGGTTGAAAAGCTGGAAAGGCACCCTTCACTTAGGAAGAAGAAGAAGAAGTCATTGATTCCACTGATTGGA GGTATTTTTTCAAGGAAAAAGCGTACTAGCAGCCAAGAAGTTCCATGA
CDS sequence (LotjaGi1g1v0428800.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGACCATGAAAGGTGGTGTCATGCTGGTGAGGAAGGCAGAGATAGACACAAGGGCGCCTTTCCGGTCCGTCAAAGAAGC TGTCTCATTATTCGGGGAGAAAGTTCTAGCTGGAGAGGTCTATGCAAGTGCAAACAAGCGCAAACAGAAGGGAACAAATG AAAATGGGCTAGAGTCTTCAAAAATTGAAAACGTTGCAATTGAGCTAGAGGAGACCCGAGAAAATTTGCAGAGGGCTAAG GAAGAAAGCATGTTAATGGCGCATTGTGTGTCTTCTCTGCAGGAAGAGCTAGAACGCACAAAGCAAGAGCTCGAAGAAAT GAAGCAAAAGGAAACAGAGAAACAACAACACCCTTTGGAACCAGAAATTAATGAAGATCTCAAGTTTGTTGAGAACTTTG AAATAAAAAATTCCAGGTTCGATGAAGAAAACATGGAGTTCCAGAAGAAAAGGTACGTGACATTCGCGAATCCACCATCT GTGTCTCATGTGATGCTGCCACCACAAGGGGTTGAAAAGCTGGAAAGGCACCCTTCACTTAGGAAGAAGAAGAAGAAGTC ATTGATTCCACTGATTGGAGGTATTTTTTCAAGGAAAAAGCGTACTAGCAGCCAAGAAGTTCCATGA
Protein sequence (LotjaGi1g1v0428800.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MTMKGGVMLVRKAEIDTRAPFRSVKEAVSLFGEKVLAGEVYASANKRKQKGTNENGLESSKIENVAIELEETRENLQRAK EESMLMAHCVSSLQEELERTKQELEEMKQKETEKQQHPLEPEINEDLKFVENFEIKNSRFDEENMEFQKKRYVTFANPPS VSHVMLPPQGVEKLERHPSLRKKKKKSLIPLIGGIFSRKKRTSSQEVP
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 4 | 204 | 201 | 1.8E-69 | – | |
| PANTHER | 4 | 204 | 201 | 1.8E-69 | – | |
| Coils | 59 | 86 | 28 | - | – | |
| Coils | 90 | 117 | 28 | - | – | |
| Coils | 130 | 150 | 21 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi1g1v0428800.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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