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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0428900 |
| Transcript ID | LotjaGi1g1v0428900.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | F10A5.7; TAIR: AT1G75730.1 hypothetical protein; Swiss-Prot: sp|B6J667|SYR_COXB1 Arginine--tRNA ligase; TrEMBL-Plants: tr|K7KHR6|K7KHR6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0428900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:92382845..92387175) extracted from Lotus japonicus Gifu genome v1.2.
CACGGACACGACATTTGAGAGGGCTTCTTTTTCTTTCCGTTCCCTTTCTTTTCTCGTGTTGTCAGTACTTCTCTTTCCTG TTTTTCCCTAAACTGACTCTGTTACTTTATTTCACCAAAGAACCTGATTCTCTGCACTCCAGGCACCAATTTCTCTTCTC CTTCTTCTCCTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCTCACTTTTTCTCTCATCTCATTCATTCCCATTGC TCTCTCTATCGAGCTTTTACCTTTTCAATTATCACAGTCTACTTCACACTCTAATCTATCTAACCTTAAACTTTCTCTAG CACCGGCTTTTTTGGCAGTTTCCAGAGTCGTGAGAGATTGAGAAATGGACAAAACGATGATGAATGGAGCGAGTCGGCGA AGCATTAATAACAAACGCATAAAATCACTGACTCACAAACGCAACAACCTCAACCTCATCCCTGGTATGTGTGTGATTAA TTGTTTGTTACCTCACCACTCGTTTATCTGATTTCTTCATCTTTGTCGCTTTCTCATAATGTCTCTCTCAAATAGGTTTT GATGCTCATGACCTTCTTCATGTTTCGGAGAAATCAAAGAAGGAGAAGGTGCGAAGCTTGAGTGCTGTTGCGAAAGCACT CTCCAGTTACCAAATGGGTTGCCATCTCTCTGATTCTCACAAATCACCAAATGCCATTTCCAACAACAAATTTAAGCTTC CCAAGAAGGATTGCAATGGCGTTCATCATGCCTCTGTTCCTCGGAAGATACGTTCAGGTACCCACCCTATTTTCTGATTC ATGTAGTACTAATTTACTCGATTTCTGAAAATGAATGAATGAACAATTTCAATTAGTACCTCACTTTCGATTTTCCGAGT TCTGTTCTGAATTTACAGCGATGAAGAAGAGGGGTCGCGAATCGATGTTAACTGATTCAGAAAAGGTGAACCGTGAGATA GATGGAATAGAATCTCCCGAAAAAGATGGCATAAAGAAGAAATCCAAAGTGAGTAGTAGTAGTAGTAGTGTATTGCTTGC AAGTTCTCTTTTATGGTTCAAAACTTCAACCTTTTGCTTGGATTCTATTTCACTTTTACTTATAGTTTTTGCTTTTGTAG AAAAAAGGAAGCTCCACCATGAGACAAGATGTGCTAGGGCCCATCACAAAAGATGAGGAAGAGGTTGCAGAGACTCTCTA TGCCTTGGCTGGAATGTTCCCTATTATTAATGGCTCCGAAGATAGGACCGAACTAGACCGCGAATCTTTGCCTGAGAAGT CCTTGGTTTTGCAGGGCCACAAGGAGTGTGCTAATGCTACTTTTGAAGGTTATTCTCTCCCTCACTACACTTTTCATTGT TAGTGATTTTTGTATTCTAAGTTTCTAATATAGTCATAGGTTTGTTTTTGCCTTTTGGTCATGCATTATAGCCTCAGGAA CTACTCAGGATGCTAGTCTTATTTCAAATAGATCACCTACGGGAGATGCGAAAATCAGTTCTTCAAATAAAACCAGTGGT CAAGAACAGGCTGATAGAACTGCTTCAAATACAAATATGCAGGCTGTGCCTATGATTGTTAGGAGTGAAAATGGTCGTGA AGTTGCGTCGCACGACACTGAGTTGTGCCTGGAAATGGGGTGTGTTGTTTTTCAGTTGCATTCTATTCTGGAATTTTTAT ACTTTACAAGTGCAAATATCTATGGTGTATGTTTTCTAATCAATTTCGTATTGCAGACTAAATGTGACCGCACAATCACT GAATTCACATCCAGATGTGGAATTTGAGATGGTAGTTATTTCAGCTTTTACAGCTTGCAGTAAAATTCTTTTGGCACTAG CTAATGCTAGTACTATTGAGTATTGATATTATCGATATGCATTTCAGGCTGGAGGCATTGATTGTAAACTAAAACAACAC ATAATTAAGCACTGGAAGGAAAATGGTATGCTTGACTACCGAATGCGTTTGTTACTAGCTGTGATTTTTCTTATTGGATT GACTTAAGTACATTTCATCAATTGACTGATCCTTAGACATCTTTGGTTGTTTTTCAGAAGGTCCAGCATTGTGGTCCGCC TTATCTTCAAGAGGATCTGCTAGGATGGATGCTTCTGAATTGCAGTAAATTTCTTTAACTTGACCTTGTTAGGCAGCCTA ATTTTCCCTCCTCTAGTACTTGCTTAAATTTGATGGATTTTGTTCCTAAGGTCTTCTGTTGCTAAAGCACCAAATTGGCT GAATGCTGCTATTTATGCATCCAAACAAGATTTGAAGCAAAGTTTTTCTTCTGGTGATAAGGTAAGGAACTATTAATTTA TGCTTACTGCTATTTTGTATGATTCTTCTACATAATGACAGAAGTTCGTCATTCTAACTGAATTGCCTATTTGTTGTTTT GTTTCGAATAATTATAGAAGCAGACTTCTGAAGTTGTGATTCGAAGAAAGTCATGGAAGAAGTGTGCAGCTCATGTTCAC ATCAGTCATCTCATCCGGAGTTTAGAGGTGCCAAATGGACAGGTTGCAAAAGAACCAGACCGAGTACACCATGGAACAGA ATGTGGAGTTCTTTTGGAAACACATAACTTGAATTGGATGAGCAATAGTAATCGTTCTGCATCTGGAATTGTTCATTCTG CTACTGTCAGGAGTTCCCATGAAACTAAGAGTGGTACTCCTCAACAGCACAGTCGTTATCATGACATGTCTCAAACTCCT GCACCTGGGGTGTATGGTCCTCAAAAGCAAGTAAGTTTATTGAAACTTTTGATTGTGATGTGTCCCCTTGCTCCTTCATC CTCATGCCCTGATGATGACTATTCACATACTGCAGAATTTCAACTTCTTGTCCTTGTCTGTTGGAGGTACTGGATTAAAG GTCAACAATGGTTTTAATGAAGGCAGAAGTAGGTTGGAATTGTTGTCAAAATCCCAAGTGCCTTATTTTCAGTCGTTACA ACAGCAGCATGGGCTCATGCCATTACCTACGCCTCAAAGTCAATATGCCTCCTCCACTTCTTACCTTGATCAGCTTCCCG CAGCAGGACCACAGGTTTTAATCTTTCTTTGTTATTAGACCCCCACCAATCTTTAATGGAATACAAAATCTAGGGGTTAA CTTTTAAAAAGATAGCTTAAAGTGATTATATTAGTGTGTTTGGTTCGCCATTGGGAATTTCAATCAATTCTGATAGAGCA AAATTAACTTTGGATGAAAAAATTGATGTTTGGGAATTATTTGGAGAATTAATTTCAGTCTCAAATAAATTATGCTAGAA GCTAGAGAGTAACTTTTGCTTTCAACACAATCAATTTTGAGATATTTTCACATTACCCTACCAAAACCATTCCTTTTCCA TAAATATATCAAAATATAAATCACTTCACTTTCAACCCACTTTGACTATAATCAATTTTATCCCAAATCAATTGTGAAAA TGCCAATGCAAACACACACTTATTGTTCAACATGAATGAGTTGATTAAAGTTGATTTGTCTACTTAGAATAACCTGCCCC ACCAGGTTTGTTCCTTAATGCTTTATTTGAGTGCAGGTTCGATTGCAGCAACCTCATTATTATGGCACCCCATTATGTGG AACTCAATACAGTTCAACAGCTTCATATAAACAACAGCAACAAAGCTTTTGGGCAGTTCAACTTGCAGCTAATGGTGGTT CTTCTTCTGTAAATTGCAACATTGTGAGGGCGCAGTATCCTAATTGGCAACAAAATGGGAGAGTTGATTCTTGTGCAGTG AGTCCATTTGCCCAAGTGATCAGTTCAATCTCTCAGCAAAAGCCATTAACCCTTGCTTCTTCATTGCACCCATCCAGAAC AATTGGGCTGGACATTCATCTTCCTTCTGTTTGTGAAGAAAGTATGGCTAGGTTCCGTAGCAGTGGCACCCCATCGCTGC AATTGTTATGTGATGAGCGTCTCTGAAATTGAACACAAATGTCCATTTTCTGGTTCATAAGGCATACAAAGATATTTTAT TAACTATAGTTCATTTTCTACTTGCCATGTTAATGAATGTGGCACAAAACTAGCGAGGGCGCGATTAACTACTGAGCATG CAAGAAAAGGTTAGCATAAATGCGAGTAGATATTCTTAAAAAGACTTCTCTTTAGATTTCAAATTATTCTTTTGGAATTT GGAAGGTCAGATAGAAAAACTATCATTTGATTCATCTCTAATGGTGTCATATTTCGTAGCTGCCCAGTGGAAACTGATTA TTTAGTTTAGTTTCCTGCACGATAGTCCCTCCTCGGATGGTAGTTAAATAGCCAAATAGAATAGGAGTTTACAGAAATAA AAGCGTGCGAA
CDS sequence (LotjaGi1g1v0428900.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGACAAAACGATGATGAATGGAGCGAGTCGGCGAAGCATTAATAACAAACGCATAAAATCACTGACTCACAAACGCAA CAACCTCAACCTCATCCCTGGTTTTGATGCTCATGACCTTCTTCATGTTTCGGAGAAATCAAAGAAGGAGAAGGTGCGAA GCTTGAGTGCTGTTGCGAAAGCACTCTCCAGTTACCAAATGGGTTGCCATCTCTCTGATTCTCACAAATCACCAAATGCC ATTTCCAACAACAAATTTAAGCTTCCCAAGAAGGATTGCAATGGCGTTCATCATGCCTCTGTTCCTCGGAAGATACGTTC AGCGATGAAGAAGAGGGGTCGCGAATCGATGTTAACTGATTCAGAAAAGGTGAACCGTGAGATAGATGGAATAGAATCTC CCGAAAAAGATGGCATAAAGAAGAAATCCAAAAAAAAAGGAAGCTCCACCATGAGACAAGATGTGCTAGGGCCCATCACA AAAGATGAGGAAGAGGTTGCAGAGACTCTCTATGCCTTGGCTGGAATGTTCCCTATTATTAATGGCTCCGAAGATAGGAC CGAACTAGACCGCGAATCTTTGCCTGAGAAGTCCTTGGTTTTGCAGGGCCACAAGGAGTGTGCTAATGCTACTTTTGAAG CCTCAGGAACTACTCAGGATGCTAGTCTTATTTCAAATAGATCACCTACGGGAGATGCGAAAATCAGTTCTTCAAATAAA ACCAGTGGTCAAGAACAGGCTGATAGAACTGCTTCAAATACAAATATGCAGGCTGTGCCTATGATTGTTAGGAGTGAAAA TGGTCGTGAAGTTGCGTCGCACGACACTGAGTTGTGCCTGGAAATGGGACTAAATGTGACCGCACAATCACTGAATTCAC ATCCAGATGTGGAATTTGAGATGGCTGGAGGCATTGATTGTAAACTAAAACAACACATAATTAAGCACTGGAAGGAAAAT GAAGGTCCAGCATTGTGGTCCGCCTTATCTTCAAGAGGATCTGCTAGGATGGATGCTTCTGAATTGCAGTCTTCTGTTGC TAAAGCACCAAATTGGCTGAATGCTGCTATTTATGCATCCAAACAAGATTTGAAGCAAAGTTTTTCTTCTGGTGATAAGA AGCAGACTTCTGAAGTTGTGATTCGAAGAAAGTCATGGAAGAAGTGTGCAGCTCATGTTCACATCAGTCATCTCATCCGG AGTTTAGAGGTGCCAAATGGACAGGTTGCAAAAGAACCAGACCGAGTACACCATGGAACAGAATGTGGAGTTCTTTTGGA AACACATAACTTGAATTGGATGAGCAATAGTAATCGTTCTGCATCTGGAATTGTTCATTCTGCTACTGTCAGGAGTTCCC ATGAAACTAAGAGTGGTACTCCTCAACAGCACAGTCGTTATCATGACATGTCTCAAACTCCTGCACCTGGGGTGTATGGT CCTCAAAAGCAAAATTTCAACTTCTTGTCCTTGTCTGTTGGAGGTACTGGATTAAAGGTCAACAATGGTTTTAATGAAGG CAGAAGTAGGTTGGAATTGTTGTCAAAATCCCAAGTGCCTTATTTTCAGTCGTTACAACAGCAGCATGGGCTCATGCCAT TACCTACGCCTCAAAGTCAATATGCCTCCTCCACTTCTTACCTTGATCAGCTTCCCGCAGCAGGACCACAGGTTCGATTG CAGCAACCTCATTATTATGGCACCCCATTATGTGGAACTCAATACAGTTCAACAGCTTCATATAAACAACAGCAACAAAG CTTTTGGGCAGTTCAACTTGCAGCTAATGGTGGTTCTTCTTCTGTAAATTGCAACATTGTGAGGGCGCAGTATCCTAATT GGCAACAAAATGGGAGAGTTGATTCTTGTGCAGTGAGTCCATTTGCCCAAGTGATCAGTTCAATCTCTCAGCAAAAGCCA TTAACCCTTGCTTCTTCATTGCACCCATCCAGAACAATTGGGCTGGACATTCATCTTCCTTCTGTTTGTGAAGAAAGTAT GGCTAGGTTCCGTAGCAGTGGCACCCCATCGCTGCAATTGTTATGTGATGAGCGTCTCTGA
Protein sequence (LotjaGi1g1v0428900.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MDKTMMNGASRRSINNKRIKSLTHKRNNLNLIPGFDAHDLLHVSEKSKKEKVRSLSAVAKALSSYQMGCHLSDSHKSPNA ISNNKFKLPKKDCNGVHHASVPRKIRSAMKKRGRESMLTDSEKVNREIDGIESPEKDGIKKKSKKKGSSTMRQDVLGPIT KDEEEVAETLYALAGMFPIINGSEDRTELDRESLPEKSLVLQGHKECANATFEASGTTQDASLISNRSPTGDAKISSSNK TSGQEQADRTASNTNMQAVPMIVRSENGREVASHDTELCLEMGLNVTAQSLNSHPDVEFEMAGGIDCKLKQHIIKHWKEN EGPALWSALSSRGSARMDASELQSSVAKAPNWLNAAIYASKQDLKQSFSSGDKKQTSEVVIRRKSWKKCAAHVHISHLIR SLEVPNGQVAKEPDRVHHGTECGVLLETHNLNWMSNSNRSASGIVHSATVRSSHETKSGTPQQHSRYHDMSQTPAPGVYG PQKQNFNFLSLSVGGTGLKVNNGFNEGRSRLELLSKSQVPYFQSLQQQHGLMPLPTPQSQYASSTSYLDQLPAAGPQVRL QQPHYYGTPLCGTQYSSTASYKQQQQSFWAVQLAANGGSSSVNCNIVRAQYPNWQQNGRVDSCAVSPFAQVISSISQQKP LTLASSLHPSRTIGLDIHLPSVCEESMARFRSSGTPSLQLLCDERL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 686 | 686 | 1.4E-252 | – | |
| PANTHER | 1 | 686 | 686 | 1.4E-252 | ||
| MobiDBLite | 129 | 153 | 25 | - | – | |
| MobiDBLite | 129 | 144 | 16 | - | – | |
| MobiDBLite | 212 | 254 | 43 | - | – | |
| MobiDBLite | 449 | 475 | 27 | - | – | |
| MobiDBLite | 449 | 470 | 22 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi1g1v0428900.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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