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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0445700 |
| Transcript ID | LotjaGi1g1v0445700.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Abscisic acid receptor; TAIR: AT2G38310.1 PYR1-like 4; Swiss-Prot: sp|O80920|PYL4_ARATH Abscisic acid receptor PYL4; TrEMBL-Plants: tr|G7KT83|G7KT83_MEDTR Abscisic acid receptor; Found in the gene: LotjaGi1g1v0445700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:94465154..94468288) extracted from Lotus japonicus Gifu genome v1.2.
TATTCTTTAAGTGTTTATGTATACAAAAATGATAAATAAACCTCAAAATAGTACAATTGTTCTTCAGATATACGCATTTC TAGCAATCTAGGACCGCAAGCGAGACTACAAAAAATGCGTTTTCAGGTTTTTTAATAACTTCATGAATTATGGTGGTAAT TAAAAAATCGTCACAAACTCGTATGACAAGTATGAAAGAAAAAGCGAGGTCTACATATAACTGGATAAGTATCATACTAA CTTTTCACTTTTTCTAGAGAAAAAACCCTAGGCCCTCTTTTATTATATCATCCCACTTGAACTTCAATGACCTTTCAGTT TTGGAAAATACATCCCCACCATCCTCCTTCACTCTTTCTACATGTATTCACATCCATAATTTTGCAATATAAATAACCCA ATAACTACAAAACCAACTCAAAATCTTCAGTTAATTAACTTCTCCATTTCTTCTCAAAAAGTTCACCATTCTTTCTCTCT CAAAAAACCAAAACCCATCATCCATCACATTCAAATCTCAGTCTCACAAAACTGAGATTTAGACACCATCATTCATCACC ATCATCACTTGTATCCATCATCATTTGCTATCACCAAGCAAAGACAAGAACAAAGATGATACCAAACCCTCCAAACTCAT CTCACCACAACCCTCCAACCACCGTCCCCGACGCCGTGGCCCGCTACCACACCCACGCGTTCTCCCCCAACCAGTGCTGC TCCGCCGTCGTCCAAGAGATTGCCGCCCCTGTCTCCACCGTCTGGTCCGTCGTCCGCCGCTTCGACAACCCCCAGGCCTA TAAAAACTTCGTCAAGAGCTGCCACGTCATCCTCGGCGACGGCGACGTCGGGACCCTCCGCGAGGTCCGCGTGATCTCCG GCCTACCCGCCGCCGTCAGCACCGAGCGCCTCGACGTCCTCGACGACGAGCGCCACCTTATCAGCTTCAGCATGGTTGGC GGCGACCACCGCCTCACCAACTACCGCTCTGTCACCACCCTCCACCCCAGCCCCGTTTCGGACGCCGACGGAAACCACCG CTCCGGCACGGTGGTTGTGGAGTCCTACGTCGTTGATGTGCCACCGGAAAACACCTCCGAGGACACGCGCGTGTTCGTGG ACACCATCCTCCGGTGCAACCTCCAATCTCTTGCGAAATTCGCTGAGAACTTGCCGCATCGAAACTGATGAATCTCAACG CTGTTCGTAAATTTTTCTCTTTTTTATAATTTTTGTGCTTTTCATTTTTATTTTACATGTAATATTAGTTGTTATATATA TTTTAATTTTTGCTAGCTTGAGTTAGTTTTGTGATTGTTTATCTTTGTTGAGAAAGTAACAATGAAACAAGGATTTCTGT GATGTTTAAAACCATTTGGTATTCGATCACCTTCAATAGTTCTTCTAACACATTTAATCTGTATTGCAGAGTGAGCTATC CTTTTGTGTTTTAATCTCTATTTTCAGTTTTAGAACATTATATTTATAGTGGTGGTAATTTACAATGCATTTTCATATTA TTTGATAATTGAGGAGAATTGCACCGACTATATGTGCTTGATAAATTGATTGAATGGAGAGTTTGTATTATTGTTTTTGA ATTGAGAGCTTAGGTAGCTAGTGGTGATGTGAATGACAAGTTTCCACATATATGATGATGAGGATGAGATGCAAAGGCTT TTGAATGAATTTTGAGTTCCAACAAGTTAAGGTGAATTGAATGGGACGATGGCTAGCTATGAGTATTGTGCTGCAACTTG CGGTATGGGTTCTGGTGTCTTCGATCGGTATTGTGCTGCAACTTGCACTTTCTGTCTTAATTACTTGACTAGATTTGTAC GGATTGATTTCTCGTGTTAACTTTAGCTGCTTTCTTATCACAATTCGGTGTTGTCTACTCATACAATCAAAGAGGATAGA CATTCAATTAACATTTTTTTTTTTTTTTCTATCCCACAATTATGACTTCTATCTTTTCTTCATTTCTCACTCTGAGTGCA TATTGAATATGTTTATGCGCTATGAGGTGTTTGTACTATTCGTTGTATGTTGTAGTATTATTACTATATATATGTTAGAA GGATATGATTTTTCTTATCTTTACGATGAGGTTAATTTTAGTGAGTAGCTGCATTTGTTAGGTTATAAATCAGGATTGTA GATAAGAAGCTGACCTTATGCATTTTTAATATTATTCTGGCATCTTCAATATTTAATTTTTTATTATATTCATAAGGAAG TAATTGAACCATACACCAAAAAAAATATTTCTGTTCTTTCACTCCCTCAACATTATTATTCAAGTTGCAACTCAAGTAGA CATTAATTAGATGGAGAGTGGGAAAAATAAATTGAATAATAATAGCTGTATTCGGCTGTAACATGACTTTTTTGGGTTTT TTCAAAAGTTATGTATATTCCCTGAGTTCCAAACTACCCATCACAACAATATTGTAAATTACGCGAAGACAGAAAAAGAC ATTGCAAGTTGCAGGTTAAAATAGTATTATATTTTGGTGTTGTTGAAGTACAAGAGGGGTTTATTTTAATTCAATTGGGA AAGAGAGATCAAATGAAAAGGAAGCAAAATCAAAGAAAAAGAAGTGTCGTCCAGCATGGGTTAGTTTGTTTTGTTTGAAT AATCACTGCTACGTCGTCGTCAAGTTGTGCAAGTTGGTGTGTGCAAGTGGGAGATAAGTTAACATATGCACGAGATAGAG AGATATGAATGCTCTTCATGATCCTCGTGCAGTGCAGTTTCTAGTCCAACTTTTATTTTCGTTGACTTCCTTCATTAGGA GGATTATTTTTCAGAAGAATGAAACTAGTTTTGAAATGCAGAAATAAAGTAAGATATATATATATATATATATAATATAA ATGTTTATTGTTAGTAAATTAATACAAATTATCTTTCATCAGGGTTCGAACCCTGACCCTTCACATTCAATTACCCTTAG CTCAACTATGTATAAGTTACCCATCCCCCCATAAAGTAAGATATATCTCACCCAAAAAATGTTGATTTGGGGTGTTAACA ACATGTTATAAGGGATGAAGAGCACAAAGTTCAAATCATTTTGGGAAAACTCTTGTTAGAAAGGAAATGCAATAATTTTT CGAACATATTTGATG
CDS sequence (LotjaGi1g1v0445700.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGATACCAAACCCTCCAAACTCATCTCACCACAACCCTCCAACCACCGTCCCCGACGCCGTGGCCCGCTACCACACCCA CGCGTTCTCCCCCAACCAGTGCTGCTCCGCCGTCGTCCAAGAGATTGCCGCCCCTGTCTCCACCGTCTGGTCCGTCGTCC GCCGCTTCGACAACCCCCAGGCCTATAAAAACTTCGTCAAGAGCTGCCACGTCATCCTCGGCGACGGCGACGTCGGGACC CTCCGCGAGGTCCGCGTGATCTCCGGCCTACCCGCCGCCGTCAGCACCGAGCGCCTCGACGTCCTCGACGACGAGCGCCA CCTTATCAGCTTCAGCATGGTTGGCGGCGACCACCGCCTCACCAACTACCGCTCTGTCACCACCCTCCACCCCAGCCCCG TTTCGGACGCCGACGGAAACCACCGCTCCGGCACGGTGGTTGTGGAGTCCTACGTCGTTGATGTGCCACCGGAAAACACC TCCGAGGACACGCGCGTGTTCGTGGACACCATCCTCCGGTGCAACCTCCAATCTCTTGCGAAATTCGCTGAGAACTTGCC GCATCGAAACTGA
Protein sequence (LotjaGi1g1v0445700.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MIPNPPNSSHHNPPTTVPDAVARYHTHAFSPNQCCSAVVQEIAAPVSTVWSVVRRFDNPQAYKNFVKSCHVILGDGDVGT LREVRVISGLPAAVSTERLDVLDDERHLISFSMVGGDHRLTNYRSVTTLHPSPVSDADGNHRSGTVVVESYVVDVPPENT SEDTRVFVDTILRCNLQSLAKFAENLPHRN
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 10 | 188 | 179 | 2.6E-81 | ||
| PANTHER | 13 | 187 | 175 | 1.6E-104 | – | |
| PANTHER | 13 | 187 | 175 | 1.6E-104 | – | |
| SUPERFAMILY | 34 | 183 | 150 | 2.39E-34 | – | |
| CDD | 34 | 184 | 151 | 1.52527E-30 | – | |
| Pfam | 35 | 181 | 147 | 1.5E-19 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi1g1v0445700.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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