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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0447100 |
| Transcript ID | LotjaGi1g1v0447100.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Macrophage migration inhibitory factor like; TAIR: AT3G51660.1 Tautomerase/MIF superfamily protein; Swiss-Prot: sp|P81529|MIFH_TRISP Macrophage migration inhibitory factor homolog; TrEMBL-Plants: tr|I1N327|I1N327_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0447100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:94592296..94595040) extracted from Lotus japonicus Gifu genome v1.2.
AGAAGTTCAAGTCAAGGCTAATACAAATCCATGTAAATCTACTAGCATCTATATATATATCATGGGAATTGGGATTGTCT TGAATTGGAATATAGGCACATTATCAAACCACCTTGGGTTACAAGTCTTTGAGCAAAGAAAGACTAGAAAGCAGTACAGA AAAAGAGGAAGAAGATGCCTTGCCTTTACATCACCACTAATCTTAACTTAGATGGAGTTGACACGGATCCCATCTTTTCT GAAGCCACCACTGCGGTCTCCACAATCATTGGTAAACCCAAAAAGGTGTGTGTCTTTCTTTCTATTTCAGCTAAAGATTC ATTTATCATAAGATATTTAGCCCTGTTGTGTGTAAGAATCCTTGTTGGGCTTGACACAAAATTATTGGCTCTGTTTTATT TTTCCTTTTTTTCTGTTGTTTGATTGTATGGTAGTTCTTCGTTAAAGTGAATCATGTTCTTCCTTGGTTTTCTTTTGGTA AATTTGGAATTTGGATTCGACATTCAATTGAGTTAAATTGTGTTTGGTTTCTGGAATCTAAGTTCACCCGCAAAATCGTG TTAATCTGAAGTTACACATGTGCATCACTTGAAATCCAAACATATATGATTAATGGGTCAATTGTTAGTTGATCTCCAGC TAGATTAGACCCAACAAGATTATTTTATAGCTAATTAAGTAATCTGACACATAAAACCGTTTCTTCATTGCTCTGAAGGC AAGCTTGTATGCAATTTATCCTTTCTCTTCTTATATTGGTGTAGTTTAGTTTCTGCCTTTCTGGATCAAGAAATCAAACA GCTAGTTTAGTTTCTGGATCCTTGGTTTAATTAATCGATATATACACACATATTTTTATTTCTATCTCTCTCCTCTTATC ATCTATCACATCTTATACTTTCTCACTCTTACTTTTTCTTTTCTTCCTATCTCTCTCTTCCTCCACCTCATTCCACCTCA TTTTGAGGTGTGAATAAATAATTATTGCTTAATCATATTCTCAGGCAACTTGGAGTCAAAGGAATCTCTGGTATATGGGG AAGAGTGAGATCTTTGTGATTGTGAACAAAGGCATGCAAAATCAGATCCCACTAATAAAATAATGTGACAATTAAGAAAT TGATGTTTTAAACTTGGGTTTTGATTCAGTCTCACTCACTTTCTCTTATTTTCATTTTTTTATTTCTTTGTGCATTTTCT ATTACATCTCTTATTTTTCTATCTTCTCTTTTTATTTCTTTGTGTGTGGGTGAAATTGAGATGTGAATAAAATATTATTC TTTAAACTTTATGATTCATGGTTGTACAGGGTGTGGTCTCCTTGTAGCAGGACAGCTATGGCCTACAGGACAAATTAAAA TGAAAAAGATCTATAGTTTCTGAAAGTTAATATAATTTGATAGTAACTAATATATGATACCATGGATCTTCCCATTTTCT TTCCCTACTATAATCTGTGACAAGTGGAAGGATAGTTGAAGGCACATTATACTTCTACAATTTGCATTTCTGGAGGCAGT AATCCTCATCTTTATCATGGGACCCCTTGCACCAACACCACTATTATTTGTTTATGGGTAGCCCTACAGTAAATCCCATC TCTTAAAAAATAGTAGTACTTAATACACCACTTTTTTTTCATAATTTTTTCACTTTACATGTTAAAAAAAATTTAAAATG AGCATACAACCCATATGTTTCTTTTTCTGTGATTTTTAAATCCAATTTATAAAAGACTACATAGTGTTTTAACATACAAA ATCCCATAGCCAACCTGTAGGTATGCAGTCTCACACCAAGAGAAATTCATTATGACACCCATATGAGTGTTGTGGCTGTC GCTTATCCTTCGGAATAATTAGAATGCTACAGCTAGTATTGTCTAAAAGGCCCTGTAATCATATATATATATATGTTTAT TAGAATTTCAATTAGTCTCCCTCTACTAAAATTTAAAGTTTAGAAGTGAGAATTGTTCTATCATTTATTTGATTATCTTA ATTTATTTGATTATCTTAGTAATACTTATGTAGTCAATACTGAAACAGTGAAACAGGTTCACTCAAGTTCATATGATAAC TTTGTTGGGTCAAAGGAGATGCTTTAAACTATGAGGATTTTTACATTGAGCTAACAATCATCTAAAATATTAAGTGTATG AGTTATCTCACTCATAAACTACTTAAAATTGGTCATTTTCTTCAAATATGAGACGTACTAACATTTGATAACACAACAAA CTTCAAAATACACATTGTCAAAAATATTTGTGCATCTATTGTAGTCTTCATTGTTCCTTCTTAATGTGTATTGTGACTAT AACTTTTGCAGTTTGTGATGGTCCTATTGAAGTCGTCAGTGCCAATGTCATTTGAGGGTAACAAAGAACCAGCTGCGTAT GCTGAGGTAATTTCAATGGGTGGCATAAATTCAGAAGTGAAGAGGAAACTGATTGCTACCATTGGCACCATATTGCAGAC TTGGCTCTCAATCCCAAGAACTCGTTTTTTCCTCAAAGTCTTTGACACTACTGTATTTCGTTCTAACTCCAAAATGTAAT GCTTTGAGATTCTGTCAAGCCACAAGATTATGCTCTTATATCAATGTGTTTTTAACTAATTGTATTATAGTTATCATATA CCTGTCTACTTGATTTTTGCATCGCGAGAAAAACTTCTAGAATTGGTCATTTATGCAAAGTTCGATTCGTGTAACTCTTC TATATATCCTGCATTTGCAAAAAAC
CDS sequence (LotjaGi1g1v0447100.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCCTTGCCTTTACATCACCACTAATCTTAACTTAGATGGAGTTGACACGGATCCCATCTTTTCTGAAGCCACCACTGC GGTCTCCACAATCATTGGTAAACCCAAAAAGTTTGTGATGGTCCTATTGAAGTCGTCAGTGCCAATGTCATTTGAGGGTA ACAAAGAACCAGCTGCGTATGCTGAGGTAATTTCAATGGGTGGCATAAATTCAGAAGTGAAGAGGAAACTGATTGCTACC ATTGGCACCATATTGCAGACTTGGCTCTCAATCCCAAGAACTCGTTTTTTCCTCAAAGTCTTTGACACTACTGTATTTCG TTCTAACTCCAAAATGTAA
Protein sequence (LotjaGi1g1v0447100.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MPCLYITTNLNLDGVDTDPIFSEATTAVSTIIGKPKKFVMVLLKSSVPMSFEGNKEPAAYAEVISMGGINSEVKRKLIAT IGTILQTWLSIPRTRFFLKVFDTTVFRSNSKM
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 112 | 112 | 3.6E-64 | – | |
| PANTHER | 1 | 112 | 112 | 3.6E-64 | ||
| SUPERFAMILY | 1 | 103 | 103 | 1.94E-25 | ||
| Pfam | 2 | 103 | 102 | 6.8E-12 | ||
| Gene3D | 2 | 102 | 101 | 3.0E-28 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi1g1v0447100.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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