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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0462900 |
| Transcript ID | LotjaGi1g1v0462900.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | 65-kDa microtubule-associated-like protein; TAIR: AT3G60840.1 microtubule-associated protein 65-4; Swiss-Prot: sp|Q9LZY0|MA654_ARATH 65-kDa microtubule-associated protein 4; TrEMBL-Plants: tr|K7LGB6|K7LGB6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0462900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:96729434..96734506) extracted from Lotus japonicus Gifu genome v1.2.
CCGATTTCGATTCTCACACTCACTCCCTTTGCTCTCAAAAACCCTTCTTCTTCTTCTTCTTCTTCAAAAATCACTCGCAT TTCGTTTTTCTTCGCGTAAAAGCTGAATCAGGTGTGTTTTCTCTATCATTTTTCTCGATTCTACTCTGTTCGGTTGATAT AATGTACTAAGAAAACAAAAAAAATGACCCAATTTCGTTTGAAATGTTTTGAACCCTAGAAATCAAGTTGGATTTGAGCA TTTTCAAATTGATTGAAAAGTATTGATGTTTTCAGTGTTTGATTGTATTTAAGTGGTTTTATGTTTCCCATTTTCTTATC ATGATGTTGCCTTTTTGTTTTCTATTTTCAGCCTACTTGTTTGCTATGTTCCGCAATCGTAGCAGTCAGTTTGGTGATCA AGAAACAAAGTGTAATTTGTTACTCAACGAACTTCAGGTTTGAAGAATCTCTTTTTGCTTATCTTCTTTTATAGGACCAA TTGAAGGACTAACGTTGGTTATTTTCTTCGTTTTTATTGATCGCTTTTTGTTGAATGTAAGGTAATATGGGATGAACTTG GGGAGACTGATTCTCAGAGGGATGCTATGTTGCTCGAAATAGAACACAAGTGCCTGGACTTGTATGGAAAAATTGTGGAT GAAGCGAAACAGTATAGAGCGAAACTTCAGAAAGAAATTGCTGATTATGAAGTAGAAATTGCCGGCATCTGCGCTGCAAT GGGTGAACAGCCACTTCATGTAAGTAATTGATTTTAGGGTTTAGCCATTTTCTTGGTCACAGTGAGATTTTACAATTGAC AAGTTTATGTTGGTGCGTCCTCAGTTTGAGACTAAGTCTTGTGAAAGCTTGAAGAAAAGACGCGAAGCTGTTATTTCACA ACTTGAGGAGATGCGCAAGTTGAAAACCGAAAGGATGAAACAATTTTTTGAAGTTTTAAATCAGTTGCAGAAGATTTCTA GTGAGCTCTATGGCAGTGTGGGGGTTAATGCATATATAGATGAGAACAACTTGTCTTTGAAAAAACTACAAGAATTACAC AGGCAGTTACTTCAACTTCAAAATGAAAAGGTGATTGCTGTCTTTACTCCTGTATAATATGTGTTATATTTGTTCCTAGA AGTTTTCATAGACAAACAGATAGTATTCAGAAATGCTGCAATTTAGTGTTACCTATTGCTAATGCTTGATTTAAGTTGAG AAAGAGCCTTTTTTTCCCTTCCAAACATTTTCTTACTCCAAGAATATTTATAAATGTTAATCTCAGATTTCTTTTAAATT GCTGCAGACCAGTCGACTGAAGCAGATATCTGACCTTTTGGACACTCTTAGTTCATTGTGCTCAGTCCTTGGCATGGATG TGAAAGAATTATTTTTTGAGATTTGTCCCACTATGGCTAATTCCACTGGTACACAAGATGTTAGTGATCATACCATAAAG AAATTGACTTCTAAAGTTCAAACTTTGAGAGAGGTTAAAATACAGAGAATGCAGAAGGTTAGTATCAGTATATCACTGCT CTTATACTTCATCTTGTGAAAAAACAGTTCTATTTGAGGTAGCCTTCCTCACTTCTCATGCTGTATCAGCTTCAAACCCT TGCAACTGCACTGTTAGAGATGTGGAATTTGATGGATACACCACTTGAGGAACAGCAGAAATTTCACAACGTGACCAGTA AAATTGCTGCTTTGGAGTCTGAATTTACTGAGCCTAACATGCTCTCAATTGATAACGTCATCTACGTGAGTTTTATCACC TAGTTTATGTAGATTGCACTATCTATTATGTAATTAAGGAAATGGGTTTTTTCCTTGCAGGTTGAGACTGAAGTGGGAAG GCTTGAACAACTTAAATCAACCAAAATCAAAGAACTTTTACTGAGAAGGAAGTTGGAATTAGAGGAAATCTGCAGAAGTA CACATCTCACTACACAAACAGTTTTTCCACACGAACATTCAATTGAACTTTTAGAATCTGGTAAGGTTTTTTATTTGAAT ATTAAAGTTACTTACATCATTCTTCATTTATTGTACTATGATTTCTTAGTTCGTGCAATCATACTTATAAACCCTTAAGG ATATATGTTAAGTATCCACAAAATTAGTCTGGTGATGAATAGTCATGAACAGAAGAACAAATATATGGCTATTAATTAAG TTTCTTCCCTTTTCTCATCTGCTAGTATAGTATTGCTGCAAATCTTTTGTTTTGTAAGTATTTACCCGTTTGTTATTGTT ATCAAAATGTGCCACAGTCCTCATTATTTGTCCTCTTACCCTATCATCCATATTTCAAACCACCATGCAGAATCTGTCAA CCATGAAAATCTGTTAGAGAAAATTGAGCACCAAATTGCAAAGACAAAAGAAGAAGCTCTTAGCAGGAAAGAAATCCTTG AAAAGGTTGAGAAGTGGTTGGCTGCTAGTCAAGAAGAAAGCTGGCTGGAGGAGTACAACAGGGTGGGGCACTATTGTGAT TGACAATAATCGATATTTCCTTTCTTTTATTTTCTCTTGCTTCATTTTTTTCAGTTACTGTGGTTTTTATAGGATGATAA TCGTTACAATGCTGGAAGAGGTGCACATCTTGCTTTGAAACGTGCTGAGAAGGCCCGGGTTTTATTAAGCAAAATTCCAG GTGAGTAACCCTCTGCACATGATAAGGAGTTCTTCTTCGAATAAGTTCCTATCATATTGCAGTGGCTTCTGCAATTAGGT TCTACTTTTTCACAAATAAATAGAATTTGGATTAAATGTAGATACATGAAAGTCGTGTTGATGCAAGCTTATTAATTGTA CTCGGGTAGATTATATAATTTTAATTGCATTATTCTTCTGAGTATTGGTTTAGTGATTTAGCAGAGGAGTTTGATGCATC AGGATGAGTTTACTTTAGGCTAAATTGTTTTTGGTCCCTTTAGTTTAAGGAGGTGTGATTTTGGGTTATGTAATTTCAAA ATCTCAAATTAATTCACTCTGCTTTCAAAATTGAACAAATGTGATCCTCAATTTGTCATCCAATAACTAATAGAAAATGT TTACATAGATCACAATTTTTGACATGGTAGGTGACAGAGTCTTTGCTTGCCATCCACATGAAAAATTGTCATCCACCTTA GCTTTTTATGTTACTTATTGGATGGTAGTTTAATGCCAGGACCATATTTATTCAAATTTGAAAGTAAGGTACTTGATTGG AGCAATGGCAACTATAGGGACCAAAATCAAGCATGTGTAAAATTACAGGGTTATGAAGTGTAGGAACTTTGGGCTTTATC CTCATTTCATTTCCCCTTTTGTTTCAATTTGTATGTTAATGTGACAGGGATGGTTGAGGCCATAATTGTAAAAGTTAAAG CATGGGAGAAAGAAAGAGGACTTGAGTTTTTGTATGAAGGAGTAAGTATATTTTACCAAAATCATTTATGCATCTTTTTA TGAATTAGCAAAAATTTGCTGTGGTAGACTTCTTTTGGAAAATTGTATATATGTATAGCATTTAGCATGTAAATTAATTA TCTTTCAGTGGATACACTTCATACCTTTTCTTACAATTTTGTTTTCGTGGATGTTTTCAGACTCGGCTCCTTTCCATGCT TGAAGATTACAGCACCTTAAGGCAGGAGAAAGAAAATGAGAAACAAAGACAGAGGGTATGTAGTATTGTAATAAAATATG TAGTTGATGGCACTGAATTTTCTTCCTTTGTTTCTACTCATTAGTTATGATCTATAACTCAAATTTTTTGTGTTACATAG GATCAAAAGAAAATTAAGGGACAACTTATGGCAGAGCATGAAACACTTTACGGCTCAAAACCCAGCCCAACTAAAAGTGT GAAAAAGGCTTCTAGATGTTCAACAATAGGAGTTCCAAGTAGCAGAAAGTTTTCTGTTGGTGGAGCATTGCTTCAGGATT CAAGACAAGGTTCTCTTTTTCAGCAGTCTAATAAAAAGGGTAACATGTCCAGTCAGAAAGGCTCTATCTTTCACAACAAG AATGTTTACCATTCAACTCAATCCTCAGGTATTTAAATTTTTCCTCTAAGAATCCTGTGTGTCCGTTGATATTTTTGGGA GAGAAATGCGACAAACACTAATTTTAACACCCTCATTCTAACACTGTGTTTTATTGGTTAAAATTTATGTATTTTAGTGG TATCCATATATTTAGAGGATCCGACATAATTTAAACTAATAAAAGAGTGTTAGTAAGAGTTCTTCAAAATGATTTGTGAT AGCTCATAGCACTCTTTTTTGAGAAGTTCAAATGCTCATTTTCAATGGCAACTGATGCAGGAAAGGGCACATCTAAAGTT TTTGGTCATTCAATGCACAAGACTACACGCAATGTAGAGAAGGAACTTGAATTTCAGTCACCATTGACTAGGAAGCCACT CTCTCCTGTTTCTCCCATTGTCTTGTCTAAAGCCAACATATCCAATTCTCAAGAAGACCATAGAAAAATACAGAATGTAG CAACACAAGCAATAAAGCAAACAGGTCAAGTGCAAATAGGAACTCCACCTTCAAAGCCATTTATTGCTGGCGATGAAGAA AACAAGACCCCAAAGAATATGGGACTTCCAGTTCCAACCACCCCTCCAACTGTCTCTATGTTCACTGCCACAACACCAGA CACTGTTAGTGTATACTCTGGTTCTCTGTCTGCTGCAAAAAGTGCTCAACTATTTGAGTATTCTTTTGAGGAGGTGAGAG CTGGCTTTATCTTACCTCAGACCTGTGCTCAATGATTCACAGTTTGGAGTGAAAGTTCAAGCAATACAAGATAGCTTGTT GGCTGACATATTCTCTATTCTGCAATAACAAAATTGCTTTTTCTTTTGTGGAATACTGGTTTGGTGCTTCACTAAGCACA TGTTAGTTTTGGTTGAAACTTTGTTTAGCGTTAAATCATACATGTTACTATGATGCATATTAACATGTTTTTTTTTTATA AATCCAAATTAATAGGGTTGTTTTCTTTGGGCCATGGATTATTTTTTTGACCTTTTGGATGATGGATTGAGAGCTTGTTT GTTTTTCTCCTTTTTTCTAAACCGAAAAAAAAA
CDS sequence (LotjaGi1g1v0462900.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTTCCGCAATCGTAGCAGTCAGTTTGGTGATCAAGAAACAAAGTGTAATTTGTTACTCAACGAACTTCAGGTAATATG GGATGAACTTGGGGAGACTGATTCTCAGAGGGATGCTATGTTGCTCGAAATAGAACACAAGTGCCTGGACTTGTATGGAA AAATTGTGGATGAAGCGAAACAGTATAGAGCGAAACTTCAGAAAGAAATTGCTGATTATGAAGTAGAAATTGCCGGCATC TGCGCTGCAATGGGTGAACAGCCACTTCATTTTGAGACTAAGTCTTGTGAAAGCTTGAAGAAAAGACGCGAAGCTGTTAT TTCACAACTTGAGGAGATGCGCAAGTTGAAAACCGAAAGGATGAAACAATTTTTTGAAGTTTTAAATCAGTTGCAGAAGA TTTCTAGTGAGCTCTATGGCAGTGTGGGGGTTAATGCATATATAGATGAGAACAACTTGTCTTTGAAAAAACTACAAGAA TTACACAGGCAGTTACTTCAACTTCAAAATGAAAAGACCAGTCGACTGAAGCAGATATCTGACCTTTTGGACACTCTTAG TTCATTGTGCTCAGTCCTTGGCATGGATGTGAAAGAATTATTTTTTGAGATTTGTCCCACTATGGCTAATTCCACTGGTA CACAAGATGTTAGTGATCATACCATAAAGAAATTGACTTCTAAAGTTCAAACTTTGAGAGAGGTTAAAATACAGAGAATG CAGAAGCTTCAAACCCTTGCAACTGCACTGTTAGAGATGTGGAATTTGATGGATACACCACTTGAGGAACAGCAGAAATT TCACAACGTGACCAGTAAAATTGCTGCTTTGGAGTCTGAATTTACTGAGCCTAACATGCTCTCAATTGATAACGTCATCT ACGTTGAGACTGAAGTGGGAAGGCTTGAACAACTTAAATCAACCAAAATCAAAGAACTTTTACTGAGAAGGAAGTTGGAA TTAGAGGAAATCTGCAGAAGTACACATCTCACTACACAAACAGTTTTTCCACACGAACATTCAATTGAACTTTTAGAATC TGAATCTGTCAACCATGAAAATCTGTTAGAGAAAATTGAGCACCAAATTGCAAAGACAAAAGAAGAAGCTCTTAGCAGGA AAGAAATCCTTGAAAAGGTTGAGAAGTGGTTGGCTGCTAGTCAAGAAGAAAGCTGGCTGGAGGAGTACAACAGGGATGAT AATCGTTACAATGCTGGAAGAGGTGCACATCTTGCTTTGAAACGTGCTGAGAAGGCCCGGGTTTTATTAAGCAAAATTCC AGGGATGGTTGAGGCCATAATTGTAAAAGTTAAAGCATGGGAGAAAGAAAGAGGACTTGAGTTTTTGTATGAAGGAACTC GGCTCCTTTCCATGCTTGAAGATTACAGCACCTTAAGGCAGGAGAAAGAAAATGAGAAACAAAGACAGAGGGATCAAAAG AAAATTAAGGGACAACTTATGGCAGAGCATGAAACACTTTACGGCTCAAAACCCAGCCCAACTAAAAGTGTGAAAAAGGC TTCTAGATGTTCAACAATAGGAGTTCCAAGTAGCAGAAAGTTTTCTGTTGGTGGAGCATTGCTTCAGGATTCAAGACAAG GTTCTCTTTTTCAGCAGTCTAATAAAAAGGGTAACATGTCCAGTCAGAAAGGCTCTATCTTTCACAACAAGAATGTTTAC CATTCAACTCAATCCTCAGGAAAGGGCACATCTAAAGTTTTTGGTCATTCAATGCACAAGACTACACGCAATGTAGAGAA GGAACTTGAATTTCAGTCACCATTGACTAGGAAGCCACTCTCTCCTGTTTCTCCCATTGTCTTGTCTAAAGCCAACATAT CCAATTCTCAAGAAGACCATAGAAAAATACAGAATGTAGCAACACAAGCAATAAAGCAAACAGGTCAAGTGCAAATAGGA ACTCCACCTTCAAAGCCATTTATTGCTGGCGATGAAGAAAACAAGACCCCAAAGAATATGGGACTTCCAGTTCCAACCAC CCCTCCAACTGTCTCTATGTTCACTGCCACAACACCAGACACTGTTAGTGTATACTCTGGTTCTCTGTCTGCTGCAAAAA GTGCTCAACTATTTGAGTATTCTTTTGAGGAGGTGAGAGCTGGCTTTATCTTACCTCAGACCTGTGCTCAATGA
Protein sequence (LotjaGi1g1v0462900.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MFRNRSSQFGDQETKCNLLLNELQVIWDELGETDSQRDAMLLEIEHKCLDLYGKIVDEAKQYRAKLQKEIADYEVEIAGI CAAMGEQPLHFETKSCESLKKRREAVISQLEEMRKLKTERMKQFFEVLNQLQKISSELYGSVGVNAYIDENNLSLKKLQE LHRQLLQLQNEKTSRLKQISDLLDTLSSLCSVLGMDVKELFFEICPTMANSTGTQDVSDHTIKKLTSKVQTLREVKIQRM QKLQTLATALLEMWNLMDTPLEEQQKFHNVTSKIAALESEFTEPNMLSIDNVIYVETEVGRLEQLKSTKIKELLLRRKLE LEEICRSTHLTTQTVFPHEHSIELLESESVNHENLLEKIEHQIAKTKEEALSRKEILEKVEKWLAASQEESWLEEYNRDD NRYNAGRGAHLALKRAEKARVLLSKIPGMVEAIIVKVKAWEKERGLEFLYEGTRLLSMLEDYSTLRQEKENEKQRQRDQK KIKGQLMAEHETLYGSKPSPTKSVKKASRCSTIGVPSSRKFSVGGALLQDSRQGSLFQQSNKKGNMSSQKGSIFHNKNVY HSTQSSGKGTSKVFGHSMHKTTRNVEKELEFQSPLTRKPLSPVSPIVLSKANISNSQEDHRKIQNVATQAIKQTGQVQIG TPPSKPFIAGDEENKTPKNMGLPVPTTPPTVSMFTATTPDTVSVYSGSLSAAKSAQLFEYSFEEVRAGFILPQTCAQ
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 688 | 688 | 0.0 | – | |
| PANTHER | 1 | 688 | 688 | 0.0 | ||
| Pfam | 50 | 631 | 582 | 1.0E-128 | – | |
| Coils | 56 | 76 | 21 | - | – | |
| Coils | 96 | 116 | 21 | - | – | |
| Coils | 151 | 178 | 28 | - | – | |
| Coils | 342 | 369 | 28 | - | – | |
| Gene3D | 362 | 496 | 135 | 2.8E-28 | – | |
| Coils | 455 | 479 | 25 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Microtubule cytoskeleton organization | A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising microtubules and their associated proteins. | ||
| Molecular function | Microtubule binding | Interacting selectively and non-covalently with microtubules, filaments composed of tubulin monomers. |
Expression pattern of LotjaGi1g1v0462900.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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