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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0468700 |
| Transcript ID | LotjaGi1g1v0468700.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | F-box protein; TAIR: AT4G00755.1 F-box family protein; Swiss-Prot: sp|Q8LG03|FB345_ARATH F-box protein At4g00755; TrEMBL-Plants: tr|I3SHR7|I3SHR7_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0468700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:97934678..97940186) extracted from Lotus japonicus Gifu genome v1.2.
TGAAAATAGTGTTCTGTTTGTCATTGAGTTATAAGCCATTCCTATCTTCTCTTTGTCTCCCTTCCTACCAACAACACTTA CCATTCTCTCTCTCTCTCTTCAATTTTCTAGGGTTTCGCTTCTTCCATTGGCATGTCTTCTTCTTCACATCGCAGGTGAA TTTTTCAACACCCTCTTACTCTCTGCCCTCAATTTTCCCTCTCAATTCCGTTTCCTTTGTCTCTCGTTTTTCTCTATTCA ATTACCATTTTCTTGAAGAAATTCACCTTTTTTTGTGCTTGCTGCGAGGGAATTTTTTGCCCCAAATGCAGGAATTAGAA TTTCATGACCCATTTCTCAATTCCTTTGATTTTCACGTTAATTTCTTGTACTTGTTTGGTTATTTGCTGTGTTGATCATT TTTCCATCCATTTAGGCAATTGGCTTTGGAACCCTTTCAATCAATTTAACCCTTTGTTTGTGGCATGATCTGATTAGCCT GAGTGGTGGAATTTTTTCAATTTTATATGGATTATTAATACTCTTTCATGTTTTTGTTTTTGTAACCCTTTGTTTGGGAT TGGATCTTGTGCTTTACTTTGAAGTTGACAATGCTAACTATTGCAATTGACCTTATCTGCCAATTCAGTTTTTCAGGTTT GAGAAGATAACCTAGTGTTGTGTATTCACCAACTGTCTTGCCCGGATGTCGATGATGGAATGCCGTAAAGATTTTCTCAG TTTTCTTGATTCTGACATGTCTCTCAAGATACTCATGTGTCTTGATGATCCAGTAGACCTTGTTCGTGTCAGCTGTGTCT CGCGATCTTGGAGACACTACGGTGAGTTAAACTGCTTTGATGTATGTAACTATTCTTCAACCGGTGCCTCAATTTCATGA GAAGTTCAATTTTGGATTCTTGTTGGTGTACGCTTAACGTTAAATTTTAATCTGGCTGTCTTTTTAGAATCATAATCTCT CTGCTTCAATTTTTATTTTAGAAGTATCCAGCCTTGTACTGATCCTACATTTACAATTTTAAGGTTTTGTCTGATAGAAT AATGTCTGAAATTTGTTTCTTATCTTTTTCACACAATGTGTTGGCACATTCTCTAAAGAGCTTTATCGAAAGTGCATATT TTTGTGATGACTGGATGCTTCTTTCCTGCTGTGTCAACCAACCTAGGTGTCATGAATGTGGATAGACTTCTCATTTCTGT TAAGATTACGTTAATACTGCAAAAGTTTTATATTTAATTGCAAGTTCACAACTGACTACATAACATTAACCATTATTATT CATTAACAGAAATTCTTAACACAAGTAAAAATGTTATGTTTAGATACTCTTGTCTTGGTTAAAAGTAGTGCTTAACTTAA AAAAAAAGGATTCTTGTGTTAGCATGGTTGACTTTGAGCTGAAAAATAGGCTATCAAGCATTAAGCATACTTTATGATAA GAATATGTACACATCATCCATAGTAAGGCACAGTTTCTTATTAGAATTTTTCTTTGTTTAAGTACTATAGAGTGAAGAAC TGTTTTGGTCTGATTCTGATCAAAGATGCACTCACTTTCATCATTGTCCCTCACAGGTGTACTCTTATTTTGGGCCTTTG ATATTATTACGGTAGGGATTTCACAAACATATAACATATTGACAAAAATGAAGTCGAGTAAATATGTGCCCCGTGAGGGT CTAAAATTCCAGAGGAAGTTGTTGAGGCTAGCTCAGGCATAAGGCAACAGTTATGACAAGAATAAAGAAAAACTTTTCTG AGATATCTGCAAACAACTCTATTCAATCTACCACAGCTAATTCAAATGCTAATTAGATATATTAAACAGGATATTATAAA CATTGTTAGCATAACATTTAATATATTCTGTTGGAAAATAATTGTGGGACCTTTTTGTAGAATTTCCTTCATCTTTGAGA TGGGATAATATTGTTTATTGGCTCATCTTTTATGTCGTTTTTTGAGACGATCTTTGCCACATATACATTGGGATTGGAAG TTGAATTTTATTAATCTTGTTTTCTTGTACTTCCTGCATTGTGTTTTTGTTTAGATTTACTCCTTTAAAAATAATAGAGC AAAAAGTTAATTTATGAAGGAGAAATGTTATTTCAGTGATATTCTTTAACAGTGGTTAAATTCCATTGAAACTGCAATTC TCACCCTTAACAGAGAGTCAGAGAGTAGTTTCGATTGAAAATATTATTTATGATGATAAACTAGTATTATGGTTTGCAGT GATTGTAAATAGCCTTTGTAAGCAGCTGTGCTTGAGAATATTTCCTCAATTATCTAGAGTTACCCGTGTCGTTGAAACGA ATCAACATGGATTGGAGGAAACCCCGGAAGTTGGATCCAGCTCTTCTATGGAATGGCTAGCTCTGCAGAGAGATCATAGA GTCTATGCTTATTTAGCTAGATCTTTCAAGTCATCTGTTTCTATGAATTGCATTGCCAAGACAATTGTTGCTTCTAGCAC TGATAATTTTCCTCAGGAGAGCATTGATAATACTCTGGAGCCAAGTGACCACATTGCTGGTAGATATTCCTACTGGTCAA GTAATGGACAAAGTAATCCCAACGTGCCTGAGACATTAACATATGAGTTAGCCTCTCAAATTTGTGTTGTTACAGAGATC AATATCCAGCCGTTCCAAGGTTCTGTTTGAAATCTTCACAAACTATGTACCTGACCGGTTGACCCATTTATTTTGCATTT CTATGCTTTCCTACTAACAATATTTTGTGTTGCCTGTTCAGCTTACTTTCAGATGGGGGGACCTATCTATTCAGCAAAAT CTGTTCGGTTTAAAATGGGTCATATTAATGCCTCTTTAGATGCTTCAGCTGATGAAAAGATTGTATGGACCTACACTTCA CCGGAGTTTCCAATGACTCAGGTATGTAACTTCTTATAACTTGGCTAGTTTTTATACTTATGTTCCATCGAATGATTTCA GTTGCATTGATTTCCTGATGAATGAAATGAAAAACTAGATATGCTTTGCTTAAGGATGTCTCAGTCTTCTGTGTAACCTT ATTGTGGATTTTGTCCTATATTGTAATAGTTCCCTTCTGTAACCAGTGAACTTATAGTTTTCAACTCTTTTTTTCATCTT CATATGATGCTTCTGTTTGACATAATGTTGACATAAGTTTTCAATGCAACTTAGGTTATGTTTGGCTCATCGGATAAGAA AGACCTAATTGTGTATTTAAGTAATAATATCATCAGGTTTTAACAGGTATTTAGTGCAACCACATTTATATAGATCTGGT CAAATATTGTTATATCATTACAACCATAGAACTTATTTCCCCTACCACACAATATGAAACTGCTGCTGTGCTGCATAAGA AAAAATATGCTGCTGCTGTCTGATTTGCTTTCCCTATTAAGAACAGTGTGAATTTCCTCAGTCTAGGTTATACTGTTGGA CAGTGGATATTGGGTTTATGTCAATTAAATAAGGTATTGTTAAAAAATTGAAAAATAAAAGTTGTTGGATGATGGTAAAA TCTATTATGGAATGACCTAGCTGGACATTGCTAAAATTTAAATGAAAGCTGCATACAAAGCAATAGCTCCAATTTTAAAT AATTTTGCTTGAGTAACTCACTGCACATTCATTTTTAACCCTGAGAACTGCTTTACATGCATAGTTTCTAAGAACAATTC CTTGTGAACAGGAAAACGAGCTGCAGAATTTCAAGCTTCCAGAACCTGTACTTTGTATTGGCGGTATCTTACAGGTTGAG CTTTTGGGAAGGGTACAGAGACAAGAAATGGATGGCTTGCTATACATTTGGTGCGTTCCTTTATCTGTGAACTGGTGTGC TGTTGAGATTTAATTAAACTTAGTGGCAGAGTAACCTTAGTATTGAATTATCCATATGGAGCCCTAGGTTTAAATTACAT TTTTCTTCTGCATGCACAAATAATTTGCCACATCGTAAGTCTTGTGTTTTGGCTTGCAATTATGTTGGATGAATGATTTC ATACTTATTGTCCCTTGTTTTAAGGATAGTCCTTTTGTCTAGTTTAGCAATGATATAAACTTCTTGGTCCCTTGGACATC TTAATGTATTAGGCTTCGGGATGCAATCAAGTTGGGTTTGAAGAAGGATTGCCTCACTTGAACCCCACACTTGCATAGGT TGTTTTAGTTGTCCTTGCTTAATGTTCTGTTGTTAATTCCAACCCTAGTTCACTGATTCAGTTAGACCTGTCTGTAAGGA TGAGAAAACTATTTGCTTTCCCTTTTCATTTTGTTGCTTGTGGACTGAATAATGCTTTAGGCTTGTAAAAAGGTTCCTAC TTCACATGACCTCTTTAGTCTCGTAAAAATGTTCCTACATTATTCTCCTAAATATTGTATACAGATCAGATAGTTGTGCA AAGTTCTAAACTTGAGGAAAATTGTGATGATTGCAGTATTTCTCATGTTCAAGCTGTGGGGAGCTTGTTGTCACCTGCAT TTAGTGTTGACATTCTGGAGCCCTCTGGAATGTTTGTGTTGAAGTGTGACCGGAACTATCAGCCCCCAGCGACCTCTGAA GAAGAATCTGGTGCAAATTCCACTGATTATATGCAGAGGGGACTGAGAGATTTCCAACAGATTGTGACTATATTGCGTGG ACATGTAATAGGAGTTGTGGAAGATGATTGGGATGAGGAAGAATATGAAGCTGATGATTTTGAAGAAGAATATGCTCTCT GACCACCTTTGCTGTCATAAAGTTCTTTGCCCTCCCTAAACAGAAAATATAAGAATCACTCCAGTTGAGGAGTGGTTGTA TTGAAATCATATGTTTTCCCTTTGTGTAGCGTTTTAAAGTTCAGAATTTTCTGCTCTGACTACTGATTTTATTCCAAGTA CCTACTTTTCCTGTAGATGATCTTGGATGTAAGACAAGTATAACTTTTTCTGCGGTTATATTATTATGGTGTAGTTGTAC AAATGTCTACTGAAAGCATTGAACTTAAGTTTTATTTTTTTGGCTTAATTAAGTATTTGGTCCCTATCCTTTACCATGTT TTGGTTTTGGTCCCTTGCCGGAGTAAATGTGGACGATCATCCCTAACGTTTGGAGAAAAGTTTGGTTTTAGTCCCTCAAC CCTTTTGGATCAACGCCGGAGCTCCGGCAGGCCACGTCAGATTAATGAGCTCCAGGTGGATTTTCTTTTTCTTTTTCATT TAATTTTTTTAAAAAAACCCATAATTAAACTTAAACCATCAAAATTAAATCCCAAATTAAATCTTCAACTTATCAGGAAA TTAAACCCATTTCCAAAAAAAACAAACCCATTAACTGTTTTTCAACTTATCAGAAAATCAAACCCACCTGATTCCTCTTC TCTCGTGGATTTCGTGGCGCTTATGGTTTTTTTATCAGAAAATCAAACCCACCTGCAAAAGTCAGACAGAACCTTGGATA GTAGCAGAGTCCCCTTCCAGACAAATAATTTCACCACTCAGATTATCACGTCCAACACGCACATAGCAG
CDS sequence (LotjaGi1g1v0468700.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTCGATGATGGAATGCCGTAAAGATTTTCTCAGTTTTCTTGATTCTGACATGTCTCTCAAGATACTCATGTGTCTTGA TGATCCAGTAGACCTTGTTCGTGTCAGCTGTGTCTCGCGATCTTGGAGACACTACGTGATTGTAAATAGCCTTTGTAAGC AGCTGTGCTTGAGAATATTTCCTCAATTATCTAGAGTTACCCGTGTCGTTGAAACGAATCAACATGGATTGGAGGAAACC CCGGAAGTTGGATCCAGCTCTTCTATGGAATGGCTAGCTCTGCAGAGAGATCATAGAGTCTATGCTTATTTAGCTAGATC TTTCAAGTCATCTGTTTCTATGAATTGCATTGCCAAGACAATTGTTGCTTCTAGCACTGATAATTTTCCTCAGGAGAGCA TTGATAATACTCTGGAGCCAAGTGACCACATTGCTGGTAGATATTCCTACTGGTCAAGTAATGGACAAAGTAATCCCAAC GTGCCTGAGACATTAACATATGAGTTAGCCTCTCAAATTTGTGTTGTTACAGAGATCAATATCCAGCCGTTCCAAGCTTA CTTTCAGATGGGGGGACCTATCTATTCAGCAAAATCTGTTCGGTTTAAAATGGGTCATATTAATGCCTCTTTAGATGCTT CAGCTGATGAAAAGATTGTATGGACCTACACTTCACCGGAGTTTCCAATGACTCAGGAAAACGAGCTGCAGAATTTCAAG CTTCCAGAACCTGTACTTTGTATTGGCGGTATCTTACAGGTTGAGCTTTTGGGAAGGGTACAGAGACAAGAAATGGATGG CTTGCTATACATTTGTATTTCTCATGTTCAAGCTGTGGGGAGCTTGTTGTCACCTGCATTTAGTGTTGACATTCTGGAGC CCTCTGGAATGTTTGTGTTGAAGTGTGACCGGAACTATCAGCCCCCAGCGACCTCTGAAGAAGAATCTGGTGCAAATTCC ACTGATTATATGCAGAGGGGACTGAGAGATTTCCAACAGATTGTGACTATATTGCGTGGACATGTAATAGGAGTTGTGGA AGATGATTGGGATGAGGAAGAATATGAAGCTGATGATTTTGAAGAAGAATATGCTCTCTGA
Protein sequence (LotjaGi1g1v0468700.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSMMECRKDFLSFLDSDMSLKILMCLDDPVDLVRVSCVSRSWRHYVIVNSLCKQLCLRIFPQLSRVTRVVETNQHGLEET PEVGSSSSMEWLALQRDHRVYAYLARSFKSSVSMNCIAKTIVASSTDNFPQESIDNTLEPSDHIAGRYSYWSSNGQSNPN VPETLTYELASQICVVTEINIQPFQAYFQMGGPIYSAKSVRFKMGHINASLDASADEKIVWTYTSPEFPMTQENELQNFK LPEPVLCIGGILQVELLGRVQRQEMDGLLYICISHVQAVGSLLSPAFSVDILEPSGMFVLKCDRNYQPPATSEEESGANS TDYMQRGLRDFQQIVTILRGHVIGVVEDDWDEEEYEADDFEEEYAL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 2 | 117 | 116 | 1.3E-9 | – | |
| PANTHER | 4 | 356 | 353 | 1.3E-140 | – | |
| SUPERFAMILY | 6 | 69 | 64 | 1.02E-12 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi1g1v0468700.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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