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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0483200 |
| Transcript ID | LotjaGi1g1v0483200.2 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Alpha-1,4-glucan-protein synthase [UDP]-forming]; TAIR: AT5G16510.1 Alpha-1,4-glucan-protein synthase family protein; Swiss-Prot: sp|Q9FFD2|RGP5_ARATH Probable UDP-arabinopyranose mutase 5; TrEMBL-Plants: tr|I1L6D0|I1L6D0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0483200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:99668223..99672573) extracted from Lotus japonicus Gifu genome v1.2.
GCCTTGGACCCCCTCATTCTTCACTATTCTAAGTAATGTGGGACTTCTCCAAAATACATTTCCTTGATCTTTTTCTCCTT CATTAGCAATGTGAGACTTACATTGCAATCAACCCCAACAATCTTCACCTGAATTGTAATGGTCTTCAGTCTTCATTGTC TACACCGACAATCATTGTCTTCACCGACAAACATAATTCTCATTGTCTATATACCGACAAATTAAATTATCATACTCCAC CATAAAGAGTACACTACACTTGGAATTAAATCATCCCAAGAATTTTCTCCACTTGGAACTAAACCATTCCAAGAAATTTC ACATGCCGAAACATTGCTGAAAATTTATGGTGCAACTTCCATGTTGGCTTTCTCCGGAGTCCGGAAGTTCATCAACCATC GACATAACCACGTACCTTGCATCAACGCCAACCAATGCCCGCACGCTATCATCACACACATTGCATCTATATCAACCAAT GTCCGTGTGCCACCTGAACAATTTCATGCCCAAAACACCTTGTGTAATCATGACTGCATCAACTCCTCCATCACAACATC ATCGCAACTGCAAACCGATTGTAAACCGTGCACCAGGTTGGTTCCCAGGAAAGCAGAACCTCCCAAAACAACACTTCACA AAGTCACACTTCTTTAGCACCTTCGCAATACCACACACCTTCGCAATACCACCATCGAACCGGAAGCTTTGATACCACTG TTAGGAAATAACGCAGCTGAAGAAGTAAAATAAACGAGGAGCGCAATCAACAACACAAGAATATAACGTGAAAACTCCAA AACCGGAGAAAAAACCACGACCGTTGTCAAAACCTCATCATCACTTCCCTCCAAGTTGTCCAAAGCATCCTCAACATATG GGAGCTCAAGATCCCTCCCATTCATACCCAGACAAGCATCCTTATAAGATACCAGATTTCGAGCTATCCCAAAATTCCCC TTCACATATGAAGAACACCCAGCCTCAGAAGTCGAAATTCCTCCTTGCGGTTCTGTTAATCCATCACCAGGCATACCCAT AGGCTTCTCCGTGCTTCGGTTGAGTAAGTCAGCCTCCTACACCGAGCGACGCGCGCGTCACAATCACAATCAATGTGGTC GAAGAATTCTCAATGATGAGAGAGAACAGAGGATTCAGGTTGAAACACGTGAGATGCACTCGCGTAACATTTTATCAATT TCAAGATCTGTTCCCCAACTTAATTCTTTACTACTTGAACTATTATTCGGGTCGGGACCATTGAACATTAATGTTTAATC TAAACATGATGAAAAAAGAAAGCAGGCTGGAGTCGGAGCTTCTAAAATAATCAAGCCTTTCCTTTTTTCTATATTCCCAT TTAGCACTTTGCGTGACACTGCACATGCGGGGAGCCAAGCGTTGAACTTGGAAGCGTGCCAAGAGAAAAAGGTAGAACCA ATCTTCTTTTAATATCTGGTTATTATCAAGATCAATTTTCTTTTCTTCGCTAATCACTCCAAAACAGAGGACGGAAACAA CACAGAGATTCAAGGATCTCGTTTCCCCTTTCCTTCCTTCGTTGTCTGTAAATCGTGACCAATTCTAATTCTTACTTCAC CAATTTCCCTTTTTCATTTTCTTTTTCTTCCCCAAATCAGTGAGAGAAAAACCAATAGAAACAACGCAAAATTAGGGTAC AAATTCATTAATTATCTATCTGTTTTTATTTATGCTACGAGTGAGTGAATGAAAACACCGCCATCACTTCTCTCTCTCAC AATTGACTCGGCCGTCCTTAATCTCTCCGACATCTCCGATCTCTCTCTCATCCCTGATCACATCCTCCTCGACCTCTTCC TGGTATTATTCTTATTCTCTCTCTCACATCAATTTCATACTTCAAAGGTACCCAATGTTATTTTTTCTTAAATTTATCAA CTTTGATTGATTCTAAGGTACCCCATTTGCTTTATTTAACGCCCCATGTCTGGATCTCCCGGAAAAATCAAAACTTGCTT GCTGCCTATTGTTACTTTCGTTCAAGAAGTAAAGCTAGGTTCTTGCTGTTTTTGTTTCTTTGTTAGCTTCTTAAGGAATG ATGTAATTTTGATTGCCCTTACTGCATGATTTGTCACTGTTCAGGTATAGTTTTGAGGCTGTGCAGCTTCTTTGTCTATT AGATGGTTTTTCAGTTTTCTTATGAAATAGGAAAATCACAAGGGCTGGTCAAACAAACCTCATTTCTTCTTGTTAAGATA TTGGATTGATAGTTATCTACCTTGCCTTATCATTTTTTTGGGGTTGCTAGAGTGATTTTGCCTGAATTCCTACTTTATTT ATTATTTTGTGGTATCAAATTATGAATTTTGTCTGTTTTTCTGTTTGTGAAAATTGGATCTTAGTTGGATCAAGTAAATC CTCTTTTACAATTTTTTGGGGATATGGTATTTGGTTCTTTCTCATGTTTCTTAATTTGGACTGGACATATTGTGGATCTG GTTTCAATTCTTTTGTAATCTGTATATAAGTTATAGCTCTTTTATTCTGCCCTGAAGTTTTATTTTTTATGGACAGAGAA TATTGAAGGCTGGAAAGCTGACTGAAAAAGTCTTGAGGCTGTTTATAGCAACTGGTAAGGATGAAGTTCTCTCACTTATT CAGGCACTCAATATCCAACATATTTTGACCCCTGTGCTTCCTACCAGTGAGTTATTTTTAAAATTTCACCTTATACTGAT GGTAGTTAAACCTTTTGTGACTTTTCTGACATTTGAAAATCATATTGCAGGGTGTTCTGAGAAATTCTAAGACAAGGTTT AAGCTATTGTCAGCAGTTTGAATTCAACTCATCAGGTTTCAAAGGAGGCTAAACTAGACTTTTGTTTTGTGAGGTAATCT GTATTGTGTACCACAGAAGATGTCTCAAGCAATTATCAACGATAATGAAGTTGACATTGTGATTGGTGCGCTGCACCCTG ACCTTACATCTTTCATGAATGAATGGAGGCCAGTTTTCTCCCGTTTCCACCTGATAATTGTCAAAGATCCTGATCTCAAT GAGGAACTCCAAATTCCTGAAGGCTTCAGTGCAGATGTGTATACGAAGTCTGATATTGACCGAGTGGCGGGTTCTTCAAG TTCTCTTCGCTTCTCTGGCTACTCTTGTAGATATTTTGGCATCCTCATCTCACGGAAGAAGTATGTTGTCTGCATTGATG ATGATTGTGTTCCAGCAAAAGATGATTCGGGAAATTTAGTTGATGCTGTCGCTCAGCATATCGTGAACCTCAAGACTCCT GCCACCCCTTTCTTCTTCAATACGCTGTATGATCCATTCCGTAAAGGTGCAGATTTTGTTCGCGGGTACCCATTTAGCTT GAGAAGTGGGGTTGATTGTGCTCTGTCATGTGGATTATGGCTCAATCTGGCAGACCTTGATGCACCAACACAAGCTCTCA AGCCAGGGCAGAGGAATACGCGTTATGTAGACGCAGTTCTGACAGTTCCTGTGAGATCCATGATGCCTGTCAGTGGAATC AACATTGCCTTTAACCGTGAAGCAGTTGGCCCAGCATTGATCCCCGCTTTGAAGTTAGCTGGAGAAGGGAAATTCAGGTG GGAAACTGTGGAAGATATATGGTGTGGAATGTGTGTGAAAGTTATCTGTGACCATCTAGGCCTTGGTGTCAAGAGTGGGC TGCCCTATGTTTGGAGAACAGAAAGAGGTGATGCCATAGAGAGCTTGAAGAAAGAGTGGGAAGGGGTGAAATTGATGGAG GATGTTGTTCCTTTCTTTCAGTCTGTAAGGCTGCCACAATCAGCTACTACAGCAGAGGATTGTGTGGTTGAGATGGCCAA AACAGTGAAGGAGAATCTGGGTAAGGTTGATCCTATGTTTTCTCATGCTGCTGAAACCATGGAAGAGTGGGTCAAGCTTT GGAAGTCAGTTGGATCTGCTTGAAACTCCTGAACTGTGGTTGGCATGGTCCGGATTTGTTTCATCCTTCCATGAGGACTC TTGTAGGCGTGAAGGTTATTGTCTTAGTGGCTTCTATATTTCTTTGTTTTGAATTTTCTAATTTATATCTGCTTTATTTA TACTTTGTAGTCCACTAAGCTTACTTTTTATCTGACAGTTAGATTGGAGGCAGAATAAAATGATAGTACTTATTGGCTTT GTGCTGATTGTCAATTGAATAAATGCTTTGTCTTGCTTTATATATTGGTCTTTGAACAAAATTCCAAGGTCTGCTAACCT TATAGCTCACAATGCATGTGAATGGGTGTCCACATGTAATTTTGGCCTTTTGGGACCTAGCATCCTCATATACCATTGTC AATTGTTACTACTGTTTAAGAAAAATCACAA
CDS sequence (LotjaGi1g1v0483200.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTCTCAAGCAATTATCAACGATAATGAAGTTGACATTGTGATTGGTGCGCTGCACCCTGACCTTACATCTTTCATGAA TGAATGGAGGCCAGTTTTCTCCCGTTTCCACCTGATAATTGTCAAAGATCCTGATCTCAATGAGGAACTCCAAATTCCTG AAGGCTTCAGTGCAGATGTGTATACGAAGTCTGATATTGACCGAGTGGCGGGTTCTTCAAGTTCTCTTCGCTTCTCTGGC TACTCTTGTAGATATTTTGGCATCCTCATCTCACGGAAGAAGTATGTTGTCTGCATTGATGATGATTGTGTTCCAGCAAA AGATGATTCGGGAAATTTAGTTGATGCTGTCGCTCAGCATATCGTGAACCTCAAGACTCCTGCCACCCCTTTCTTCTTCA ATACGCTGTATGATCCATTCCGTAAAGGTGCAGATTTTGTTCGCGGGTACCCATTTAGCTTGAGAAGTGGGGTTGATTGT GCTCTGTCATGTGGATTATGGCTCAATCTGGCAGACCTTGATGCACCAACACAAGCTCTCAAGCCAGGGCAGAGGAATAC GCGTTATGTAGACGCAGTTCTGACAGTTCCTGTGAGATCCATGATGCCTGTCAGTGGAATCAACATTGCCTTTAACCGTG AAGCAGTTGGCCCAGCATTGATCCCCGCTTTGAAGTTAGCTGGAGAAGGGAAATTCAGGTGGGAAACTGTGGAAGATATA TGGTGTGGAATGTGTGTGAAAGTTATCTGTGACCATCTAGGCCTTGGTGTCAAGAGTGGGCTGCCCTATGTTTGGAGAAC AGAAAGAGGTGATGCCATAGAGAGCTTGAAGAAAGAGTGGGAAGGGGTGAAATTGATGGAGGATGTTGTTCCTTTCTTTC AGTCTGTAAGGCTGCCACAATCAGCTACTACAGCAGAGGATTGTGTGGTTGAGATGGCCAAAACAGTGAAGGAGAATCTG GGTAAGGTTGATCCTATGTTTTCTCATGCTGCTGAAACCATGGAAGAGTGGGTCAAGCTTTGGAAGTCAGTTGGATCTGC TTGA
Protein sequence (LotjaGi1g1v0483200.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSQAIINDNEVDIVIGALHPDLTSFMNEWRPVFSRFHLIIVKDPDLNEELQIPEGFSADVYTKSDIDRVAGSSSSLRFSG YSCRYFGILISRKKYVVCIDDDCVPAKDDSGNLVDAVAQHIVNLKTPATPFFFNTLYDPFRKGADFVRGYPFSLRSGVDC ALSCGLWLNLADLDAPTQALKPGQRNTRYVDAVLTVPVRSMMPVSGINIAFNREAVGPALIPALKLAGEGKFRWETVEDI WCGMCVKVICDHLGLGVKSGLPYVWRTERGDAIESLKKEWEGVKLMEDVVPFFQSVRLPQSATTAEDCVVEMAKTVKENL GKVDPMFSHAAETMEEWVKLWKSVGSA
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 346 | 346 | 1.5E-206 | – | |
| PIRSF | 1 | 347 | 347 | 6.2E-181 | ||
| PANTHER | 1 | 346 | 346 | 1.5E-206 | ||
| Pfam | 6 | 345 | 340 | 1.1E-189 | ||
| CDD | 33 | 120 | 88 | 0.00902213 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Intramolecular transferase activity | Catalysis of the transfer of a functional group from one position to another within a single molecule. | ||
| Biological process | Plant-type cell wall organization or biogenesis | A process that results in the biosynthesis of constituent macromolecules, assembly, arrangement of constituent parts, or disassembly of a cellulose- and pectin-containing cell wall. |
Expression pattern of LotjaGi1g1v0483200.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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