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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0496700 |
| Transcript ID | LotjaGi1g1v0496700.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | V-type proton ATPase subunit G; TAIR: AT4G25950.1 vacuolar ATP synthase G3; Swiss-Prot: sp|Q9SP55|VATG_CITLI V-type proton ATPase subunit G; TrEMBL-Plants: tr|A0A151QW52|A0A151QW52_CAJCA V-type proton ATPase subunit G; Found in the gene: LotjaGi1g1v0496700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:101207873..101208600) extracted from Lotus japonicus Gifu genome v1.2.
ATGGATCCCTTTAAAGGACAAGGAGGCATTCAGATGCTGCTAACTGCTGAACAAGAAGCCCAACACATTGTTTCTAATGC AAGAAATTGTAAGATGGAACGTTTTTGTTATATGATCTTGTTATATATAAACTTTGATATAATTTATTGCACCGGAGAGT TTTACAGAATAGTTTTACACAGACATTCAATCATACCTCTGAAATTTCTCATAACACGAACTCTCTTTGTGTTTTCTTAT TTTAATTTATTGATGATGTGGTAAAATAGTCAATTCTAATTGGATATCTGTGTAAAATTTTGGTCAGTGCATAATTATCG AAGTCGTAAACTTTTCATCATTTACCAATATTTAATGAATGAATGGGGGTTTCAATTTCTCAGTGAGGACTCAAAGGTTG AAGCAGGCAAAAGAAGAGGCAGAGAGGGAGGCAGCTCAATACAGAACTCATATGGAAGAAGAATATCAAAAGTCAATTTC AGAGGTATAAAATGTTGTCTCAATAAAATTTAAACCTGCATGGACCTGTTTTTATTTGAATAGAAGTATTTATTTTCTTT GCTTATTGGGTTGAGTATGCTTAGAATACTGGGAGCTCTGGATCTAATGTAAAAAGGCTTGATCAAGAGACAGAGGCCAA GATTAGAAATTTAAAGAAATCAGCATCAAAGGTCAACACAGAAGTTGTTGACATGCTACTCAAGTATATTACAAACATCA AAACATAA
CDS sequence (LotjaGi1g1v0496700.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGATCCCTTTAAAGGACAAGGAGGCATTCAGATGCTGCTAACTGCTGAACAAGAAGCCCAACACATTGTTTCTAATGC AAGAAATTTGAGGACTCAAAGGTTGAAGCAGGCAAAAGAAGAGGCAGAGAGGGAGGCAGCTCAATACAGAACTCATATGG AAGAAGAATATCAAAAGTCAATTTCAGAGAATACTGGGAGCTCTGGATCTAATGTAAAAAGGCTTGATCAAGAGACAGAG GCCAAGATTAGAAATTTAAAGAAATCAGCATCAAAGGTCAACACAGAAGTTGTTGACATGCTACTCAAGTATATTACAAA CATCAAAACATAA
Protein sequence (LotjaGi1g1v0496700.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MDPFKGQGGIQMLLTAEQEAQHIVSNARNLRTQRLKQAKEEAEREAAQYRTHMEEEYQKSISENTGSSGSNVKRLDQETE AKIRNLKKSASKVNTEVVDMLLKYITNIKT
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 110 | 110 | 1.7E-58 | – | |
| PANTHER | 1 | 110 | 110 | 1.7E-58 | ||
| Gene3D | 5 | 61 | 57 | 6.8E-19 | – | |
| Pfam | 7 | 109 | 103 | 1.3E-31 | ||
| TIGRFAM | 8 | 109 | 102 | 1.7E-25 | ||
| Coils | 32 | 59 | 28 | - | – | |
| MobiDBLite | 37 | 76 | 40 | - | – | |
| MobiDBLite | 37 | 59 | 23 | - | – | |
| MobiDBLite | 60 | 74 | 15 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Vacuolar proton-transporting V-type ATPase complex | A proton-transporting two-sector ATPase complex found in the vacuolar membrane, where it acts as a proton pump to mediate acidification of the vacuolar lumen. | ||
| Molecular function | ATPase activity, coupled to transmembrane movement of substances | Catalysis of the reaction: ATP + H2O = ADP + phosphate, to directly drive the active transport of a substance across a membrane. | ||
| Biological process | Proton transmembrane transport | The directed movement of a proton across a membrane. |
Expression pattern of LotjaGi1g1v0496700.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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