Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0499300 |
| Transcript ID | LotjaGi1g1v0499300.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | KHG/KDPG aldolase; TAIR: AT3G47000.1 Glycosyl hydrolase family protein; Swiss-Prot: sp|P50846|ALKH_BACSU KHG/KDPG aldolase; TrEMBL-Plants: tr|A2Q5T0|A2Q5T0_MEDTR KDPG and KHG aldolase; Found in the gene: LotjaGi1g1v0499300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:101509812..101514446) extracted from Lotus japonicus Gifu genome v1.2.
CGAATTTTCACGTTGGAGTATAATTTGATCCTATCCTGCTCCTGCATTGAGACTTGCAATTGCAATGGATAAGCCTTCAA TCTTCAGCTAAAAAGTTTCAGTTTTTCTAGGAACACAAAAGAATAGTGTACAATTATCACAATGGGCACTGCAACTGCAA CCCTTACATTGTGCCAATGGCCTTCTTCTTCTTCTTTGGGTCTGCGTGCCAGGGTTTCATGCAGTGCCTCTCAACCTCAG CCTCAGCTTTCAGCATCCTCAGTTGACAAAACCCTTTGCCAGATTAAGAATTCTGGAATCATAGCTTGCCTCAGAGCCAA CAGGTCCCACGTTCCTCTCTGTTTCTTTTTTTTAGTTTTCTGTTTTTTATTGAAGCAAATTTTTCAGAGTGAAAAAAGAA GTGGGATTTTTTTTGCCAAAATTTATTATTTTTACTTTTTTGGGGTGGTTGAATCCATATGTGATTATTCTAGCTTTTAC ATTGATGTGTGTATAAATTTGGACATTGAAATTCTTCATAGTCATTGTACACGTTTGAATGCAAACCAAATGGCACTTAC GGGAGCTTATTTAGTGCATTTTCTAGTAGATAAGCACCAATAAGCCCGTATCCAAACAAACTCATTATACCCTTTGGATG ATAGCATGTGTAGTGCAAGCGCAACTTATCTGTTTGACTAAGGAAAAATTGTGGTAGAAGTTTGTAAATTGCAATAAAAA ATGTGCTCCCAAGAAGATTGGCTTGATTACTCTAAATTTGTATTGGGAATCTTGTTTCTATAAAAGTGCCTTGTAAACGA TGAAAAAGGAGAAAACTTTGGTGGCATGCAACATGTGAGGTAGGGACGGCCTACTTTGAATAGCGGAGTCAGCGCAATAA ACTTGTGATTGTTTTGTGTTTAGTTATGCTGCTGAACATTGAAAATGAAAAGGTTTTTCTGTGCATCTCTTTTTTGCTGA ATTGAGACTAATTCTCTGCATGCTTATGTTTATACTTCTGAAGGATTAGATTCAACTTTTAGCGTGATTCTACGAGGATA TTTCTCCAAGTCATGACCATAGACAATATTTTCAGTCTTTAATAAATGCTAGCTCACCCTTTATTTTTCACTTACATATA GTGCAGAAGTTGCCTTGGAAGCTGCAAATGCTGCCATAGCAGGTGGAATTTCAGTTGTGAGTTTCCTTTTGAAGTTCTTT TATTGAATCTGTTAGGACTAGTACAAGTCTTGACATTGATAGTTGAATCAGCTGTATGAAATTTACAATTATATGAATTA CTTCGGAGTCTTTTGTTTGAATTTTAAAGTTTAAATCTTGATCGTCGAAGATCATAATATCATATGAAGTTTGGGAAGGT TGGGAAGTTTTATAAGCTGGAAGAAACTGGTTCTTTGTGATTTGCAGTTTGCCGAATAATATATCAGGATAAATACATTT GGTGGAATATAGTGTGGTTAACTCTAGATTTTTGTTGTTTGTTTCTCATCATCTTTATCCTCTTCACATGCAGTTGGAGA TTGTGATGTCTACCCCAGGTGTGTTTGAGGTTGTTTGCCTAAGATTTTCTGCTTCCTCACTTTATCTTGTTCAGAGCTTT AGAATTCATAGGCTTGTGGTCTGTTTAGGTTATACAGCAGCTTGTGAAGGAGCATCCAACAATGGCTCTGGGGGTATGCT TTCACTCCTTGAGTTTCGTTCTGGTTTCTCAAATGACATTAATTTTCTTTGTTAGCGTGTATATCACATGAACCTACCCA AAGTTTATGAATGAGGAGAAAATGTCATTGCATTCTCTCTCAGCTAATTGAATTTTAAATTTTTATGATTGTTTCTGTAT ATAGCATCGCCTGATAGATAAACCTCGTGCTTGCAATTTCTTTTTTCCTCTCGGTGAATTTTCCTTGGCTATCAAATGTA GAAAAATTATTTATTCTTTGGATTACTACTTATAAAATCATAATGTTTGGGTTAAAATGAGAGTTAAGGCATTTGAATGG TTCTATTGTTAGGTGTGGTATGCTAACTCATGCATGTGTATAGGTAAATTAATATGATAACCCCTTTATCGGTGAAAGAG AAATGTCCAACCTTGCTTTCAATACATTGTCTAATTGATATCTCCAAAATTTACCTGAAGTCTCTAATTTCTTGTAAAGG AATCCTATTGCGTATTGTTATCATTTGTTGATACTTGATACTCTTTACATGAAATTACATTTCTTTCCAACGGTTTCCTG GACTGAACAGATTTATGCCTTTAGGTTGGAACGGTTCTCAGGATTGAGGATGCAAAAACTGCAATTAATGCTGGAGCTAA ATTTCTAATGAGCCCTGCAATTGTCAAGGTTTGAAATTTTATTGTATATATATATACACTGAGATTCACACAATACCTGA TTTGCTAAATCACAATTTTTTTAATATTATTATTCGTTTTTCCCTATTATTATTATTGTTGGAATTGGCTTTGGAGATTA TTGTTGTCACATTTCATTAGGAACGTAATTTTTTGTAGACATACTACATGTCTTACCAATATGCATTTTTCTATAACTTG TTTACTGGTTATCAGGACATTATGGACTACATGCAGAGTGGTGAAATTTTATATATTCCTGGCGCCATGACTCCAACCGA AGTAAGAGGCAAAGTCTAGGTTCAATCAAGCATTTTACAGATCTCATTATTCATTCTCACATCATAAATGTTCTTCCTAT AGTTTGCATATTATCTAGCATTCATTTGACCTCTGTTTAATGATCATTGTAACAATGCAGATATTGTCTGCATGGGATGC TGGTGCTAAAATAGTCAAGGTTAGCCTTTCATGTTCATTTATGTTTGCGATGTTGAAGAATATTGGAGTATGGACATAAT CCATTTATTTGAAAGATATGCATCACTTTTTGCAGAAATGAGTGGACACTTTTGGTTGTGTTGGCTTGGCATTTTCTCAT TTCTTCGATTTTGCATTGTTTAAATTATATCTGCTTTACTTGGAGTCAGAACAGTGCCTCCTAATTTGCATACATATAAG TACCTGTCTTATACATTTTTTCTTGGGGGAAGGAGAGAGAGAATATGAGCGGGAAGAGAGAGACAGAGGGAGAAAGATAG AATTAAACCAGTGAAAGATTTGACCAGTAGATAGGTAATCAAGAGAACGAGGAAAAAGGATCTGATGAGTACTTTATATT GTCTAAGGGTTATATAAATTCACATTATAAATATTCCAACTGAGATCAAATTACCACTTCACTTACATGATGTATATATT GTATGCTTCTAGCAAGTTTGGCCTCTTATGGAGCTTTATTTTGAGGAAACATATGGTTCTCATTATTTTTGTTATCTTAT CATAGTTCAACGTCCTCATTAACATTAGTTTTAAATTTAATAGAAAAGAAGCTTGAGCTATTCATATTCAAGCTTGCCAT CTCTATTTCCTTTTCTCCTTCGATATGGGAGCAGTGCTTTTACTCTTTTGATAAACTAATCTGATTTCTTAAGGTGTAAA TATTTTTTCCCATCCACTTGAGTTGCAGCCAGATATTGATTTAGCCACCAATATGTATATTATATGCATGAATGGTCAGA ATTAGAAGTTAATAAGATACCTATAGATCACATCCAATGGTCAAGAATCACTTTTTTTATAAAAATATTCACACAAACAA AGCCACACATATATACAAACACCTAATGAAAAGAATTATAAATATCACAGGTCTATTATACTTTTTTTATTCTTTCATTC ATACACCAGATTTACATGCATTATCTGTTCTAAAATAATTTCTTATAATTGCTTTTACCTTGTTGATAGGTTTATCCAGT TTCTGCACTTGGAGGATCTCAGTACATATCAGCACTGAAGAGGCCCTTTCCTCATGTCTCTATGGTTGCTTCTCAGGGAA TAACAATAGGTAGTTTTTCAGTTTCTTCTATTGTATTATTTTTTGTGTGATTTCAAGCTCTGATGCTGTCTATGACACAA TAGGAGAATTTTATACATATATTGGCATTACCAAATACTTAAAATCTGCACCTATTTCAATAATCAAGATGTGTTATACT GCATCAGAACATATATGGGTACAAGATATATAAAATTCAGGATTTTTATGGTTAATATGTCACTACCAAAATGAAAATAT GACCTTTACTTTTCATATGTCACATCCTTGAATATTTTACAAATAGTTAACCCAATACTTGGGAAATTAGAATGCTCACA CTTTCGCAAGCATTCTTATAAGTGACATTACTTGCGACATAAATGGCAAGCATTCTTGTATATGTTATTTGAATTATGAG AGTCCTTGCTGCTAGGTTAATGCCATTGGCTGCATAACTTTCCATTGTGAATGACTTCACCTCTTATTGCTTGTAGATTC TATTGGGGAATATATTTCGCGAGGAGCATCATCGGTTGTTTTGTCAGACGCGATATTCGATAGAGAGGCAATTGCACAAT GTAATTTCAATAAGATATATGAACTTGCAAATTCTGCTACCTTGCTGGGTAACCAGGCTTTGAATAGATAACATTTTTTT ACTTCTATAAATATATATATATAATGGCCACTGTTTTCTTTTAGATTTAGCCTGAATGGTTGTTTGATCGTAGCC
CDS sequence (LotjaGi1g1v0499300.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCTCTGGGGGTTGGAACGGTTCTCAGGATTGAGGATGCAAAAACTGCAATTAATGCTGGAGCTAAATTTCTAATGAG CCCTGCAATTGTCAAGGACATTATGGACTACATGCAGAGTGGTGAAATTTTATATATTCCTGGCGCCATGACTCCAACCG AAATATTGTCTGCATGGGATGCTGGTGCTAAAATAGTCAAGGTTTATCCAGTTTCTGCACTTGGAGGATCTCAGTACATA TCAGCACTGAAGAGGCCCTTTCCTCATGTCTCTATGGTTGCTTCTCAGGGAATAACAATAGATTCTATTGGGGAATATAT TTCGCGAGGAGCATCATCGGTTGTTTTGTCAGACGCGATATTCGATAGAGAGGCAATTGCACAATGTAATTTCAATAAGA TATATGAACTTGCAAATTCTGCTACCTTGCTGGGTAACCAGGCTTTGAATAGATAA
Protein sequence (LotjaGi1g1v0499300.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MALGVGTVLRIEDAKTAINAGAKFLMSPAIVKDIMDYMQSGEILYIPGAMTPTEILSAWDAGAKIVKVYPVSALGGSQYI SALKRPFPHVSMVASQGITIDSIGEYISRGASSVVLSDAIFDREAIAQCNFNKIYELANSATLLGNQALNR
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 148 | 148 | 3.0E-72 | – | |
| PANTHER | 1 | 148 | 148 | 3.0E-72 | ||
| CDD | 1 | 137 | 137 | 1.78875E-40 | ||
| Gene3D | 1 | 145 | 145 | 1.6E-54 | ||
| SUPERFAMILY | 2 | 141 | 140 | 1.5E-37 | – | |
| Pfam | 3 | 136 | 134 | 2.6E-24 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Catalytic activity | Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic. | ||
| Molecular function | Lyase activity | Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring. |
Expression pattern of LotjaGi1g1v0499300.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…