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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0500300 |
| Transcript ID | LotjaGi1g1v0500300.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Quinohemoprotein ethanol dehydrogenase type-1; TAIR: AT1G61360.1 S-locus lectin protein kinase family protein; Swiss-Prot: sp|P77931|PVADH_PSESP Polyvinylalcohol dehydrogenase; TrEMBL-Plants: tr|A0A0L9U3A1|A0A0L9U3A1_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0500300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:101648774..101653143) extracted from Lotus japonicus Gifu genome v1.2.
ACTTTGAGTTGAAATTTAAAGATTTTGATTGAGATGGGAATGGCAACAAGACTGTCCCATTTAAGCAATTTTTTAATATA TGAGTCACTTGGATACAAGTTTCCCAAAAACATATGCACATCTTGCACTAATTGCTGCAAACACCAAGAAAGCAACAAAA ATCTCCATGTCCAATTCCATGTCACCGCCTAAATACCTGATAGATTTGGTTCTTTGCTTATTATTGTTATGTGTTCATGC ATTAGTAGTTGCTGCAAGTTTAGGTGTATGATACTAATTCCCACTCTATATATATCACTTCCTTGTGCATATACTAGCTT GGGATTTAACTTTTAAAATCTAATATACTAATTTCATATTTTCATGCTTTTAATTAGGGTGTTAGGCAAGAATCACAAGA CTGGTTAAACCATGGTGGAGATTTGTTCAACAGAAGATTTGCTTATAATGAGTATAAGATAAGCCCAGAAACCGCACCAA ATTTGCATTTGAAGTGGAAATTCTATGCAGGCAAAGATATCACAGCAACACCAGCCATATATGATGGCACCCTTTACACT CCAAGCTGGAATGGTAATGTTTATGCCGTTAGAAAAGGTGATGGAATAAATGGATCACTTGTTTGGAAGCAGAACTTGCA GAAAGTGACAGGTCTAAATGCAACTGGGTTGCTTCCGCTTAAATTGGACAGTGTCTAGATCCACTCCAACTGTAGCTGGG GATTTACTGATTATTGGAATCTATGGCCCTGCTGTTGTTATTGGTCTCAAAAGAAGAACTGGTGAGCTTGTGTGGTTGAC CCATTTGGATAATCATCCTAAAGCAGTTATCACCATGTCTGGAACATACTACAACGGGTCAGTACATGACTACCCCCCTC TTGAACTTCAGTTTCATTCTAATTTGTATGTCACTTTAGGAGTTTTTTTAGGGAGGGAAGAGGAAGTACTCCCCCTTGTT TGAAAGTTCAAAATTCCTCAAAGACCTCCAAATTGGAGGAACTCCACAAAATCACTAAAGGAGTGTTTTTGAGGGGTTTG GAAGGGCTTTCGAAAATTTCCCAAAGTCTTAAGCCTTGTTTTGTGAGTTTTTAGGAGATGGGAGGGAAAGACTTAAAGGA GAAGGGAAGGGAAGGCAAGAGAGGAAACTAAAAAATTGAAGGTGTGTTTGTGAATTCTATTTTGGAGGGGAGGGAAGGGA AGGGGGATGGCTTAGAAAACTCTCAAACACGGGGAGAGCTTCTCAGAAACCTCACAGTTTTCTTCCCTCTCCTCCAAAAT CCAAGGAGACAAAAGATCTGTGTCCCAGTAGCTCATATTTAAGGGCCACTTTAAGTTCTTTAATAATTAACCTAACTTGC ATAGTTGGATTTATATATAGTCTCATTATCTAACTATTTTACTTTATAATGATTTTGTTGCCTTTGGTTTATTATGCTAA ATCCCTATATTAGAGGTTACTATGTTGGAACATCTTCACTAGAAGAAGGTGCATCTATTGAACAATGTTGCATATTTCGT GGAAGCCTCGCAAAACTTGATGCCCGAACCGGTGCTATCTTATGGAAGACGTTTATGCTACCAGATAACAATGGCAAGAT AGGAGCATATGCTGGAGCTGCTATCTGGGGAAGTAGCCCCTCCATTGATGCTTATAGGAATCATGTGTATATTGCAACCG GGAACTTGTACTCTGCCCCATTGCACATTCTTCAATGTCAAGAAAGACAAAAAAATCGAACCACGCCTACTGAACCAGAC GAGTGTATTGAACCGGACAACCACTCTAATTCAATCCTGGCACTTGATTTAGACTCTGGGATTATTAGATGGTACCGCCA GTTAGGAGGCTATGATGTATGGTTCGCTGCATGCAGTAATGTTTCAACTTCTTCTAAGTGTCCTCCTGAAGGTCCTACCC CAGATGCTGATTTTGGGGAAGCGCCAATGATGTTGACAACAAAAATAAATGGAACCAGAAGAGAAATTGTTGTTGCTGTC CAGAAAAGTGGCTTCGCTTGGGCTTTAGATCGCAACAATGGCAACCTCGTTTGGTTTAAGGTAATAGTTAAACCTTTTTA TGACATTCACTACAATCCTGAGTTAAAAACCTTTATTTCATATGCAAAGGAATTGCTTAGCTAATCAAAACAGAATGTGA TATGTCAGGTTAAGTTTGTAAACATGATATGAACTTAATAGTACAATTTATGCACAAAGCTTGTCACTTGCATATTTTTG TTTGGGACTATGTGTGTAGCTTACATTGAAGTTTATGACAGTTCATGTTATAATCCATTAGATAAGTTGCAATCCTTGTT ACACATAGTCACCAAACTCAACAAGTTATTACAAGCATTACAACAATATACCAACTAGTTTAGGCATAGAAATCTTCTGT CACTAATTTGTGTTTCATCTTTTTGTCTCACCACTTAAACTGTCATGTCAGTTAAAAACATGTGCTTTTTTAACTGATAT TAAACAATCTAATTGATGGAATAGGCACTGATACACAAATTGGTAATAAAATATTGGCATCCCAAATTTAGATGGTATTG AATTTATAATGTAATCATGTGATCATAAACCAGTTACACATGATTTATTTTTCAAGTACTACATACACTATATGAACACA AAAGTCATTGATACTTTTGCAGGAAGCTGGGCCAGGTGGGATTTTAGGAGGCGGAACATGGGGTGCAGCAACTGATGAAA GGAGGGTTTACACCAACATAGCAAATTCAGACAAGAAAAATTTCACTCTTGTACCATCAAATATGATTACAACCACTGGT GGGTGGGTAGCAATGGATTCTAGCAGTGGCAAAATTCTGTGGTCTATAGCTAACCCTAGTAATAGCTTTTGCAAAATTCT CTTTGTTGGATCCACAAATAGAGTTGGAACCATATATGCAATCAATGCTAAAAATGGAAATTTTTTATGGTCCTTTGAAA CTGGAGGCAGTGTTCATGGAGGCATGTCAGTTAGCAATGGGTGCATGTATGCGGGTCATGGATATAGTGTTTCTCTGGGG TCTTTCTCTAACTTCACAGGTGGGACTTCATTATTTGCCTTCTGTGTCTAAGGAATTTATGCAATCAATGTTTGAATGTA TCAATAAAATAGAAACTACTTACTATTCTGAAAAATTTGTGTTTTGTACTACTTTGTTGATTATATTTAAGAAATTTCAA ACATTTAGTTTTCAATTGGCCTTTAATGAATGCTTAACAACTTTTCATCTTTCCTTTATGTTAGCAACTTAGTAGTCTAT GGTGATGGAAATTTTAAGGATATAATACAACATGATAGCATGTTCAATAATCTCTACGCGTATAATTAAATCATATTATT CGCATACTCGGTACAAGAGAATAATACATCTTTTTGTATTCTTGAACGAATCCTAATGTGTGTGAGAATAACTGATAAGT ATGTAGGGTATAATTCATCAGATGAGATTAAAGATCTCTCACTGGGTATAAATAAATAACTTAACACTTAAATTGATGAT TAATTATTAATTTCCATAATTGATATATTAATAATTAAAAAAAAAACATGTTTTCAACGCGGCACATGATAGCTTCATTG GACCTATGCCTTATGTGCGCGGCAGCCTCTGAAACGACATTGCACGTCTTGAAGCCTATCATGTGTCTCAGCTTTGGACT TGGATGCTTCACGGCTCGGTTGATAAGTGTCAAATTTATTAGGTTTATATTATTGTTTAGGCACTAATTTTGTGTAATTA TGAGAAATGTCTTGCAGGTTAACTCTCTTTTGATTAGAACATTTGGAATTGTGAATTTTGATCTAGAATGTGTTTTTTTC ATGACTCCAATCTCAATTTGAGTTTGTAGGAATAAGATTTAAGAAGAAAATGCTTGTTTTGGGAGAAGATGATGTTTAGG AATGAAGAGACTAACTAAGCTTCTCAAAACCCGCTCAACTCTTTGAAGCATGGGAGAAAATATTGAATCTGCCAAAAATG CACAAGCGTTTAACAAGGCCGCTAAGCATCCAATGGCAGTTAAGGGAAAACCCACCTCTGAAGAAACAGGGTGCCTACGC CCTGTTCAGATCTGAACTTCATAAATATGATTTTAATCATTAAAACGGATATATCACGAAAAAAATAGAGGAGAAACAGG TAGAGAAGAAAGGAGAGAAGACTTCTAAGGTTCCAATAGCTCACAGCGACCTGGCGACAAGCCGAGGACGGCACAGAATG GGCACTTCGTCTCATTTCTCTTTGTAAGCTATTTAGCATCCATGTTTATGGATAACTAAGCTTTTCTTTGTTGGGATTTG GTGTAGTACCTTGACTCTTGTATTATGCATATGAATATATTTATCTCTTG
CDS sequence (LotjaGi1g1v0500300.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCAACTGGGTTGCTTCCGCTTAAATTGGACAGTGTCTAGATCCACTCCAACTGTAGCTGGGGATTTACTGATTATTGG AATCTATGGCCCTGCTGTTGTTATTGGTCTCAAAAGAAGAACTGGTGAGCTTGTGTGGTTGACCCATTTGGATAATCATC CTAAAGCAGTTATCACCATGTCTGGAACATACTACAACGGAGGTTACTATGTTGGAACATCTTCACTAGAAGAAGGTGCA TCTATTGAACAATGTTGCATATTTCGTGGAAGCCTCGCAAAACTTGATGCCCGAACCGGTGCTATCTTATGGAAGACGTT TATGCTACCAGATAACAATGGCAAGATAGGAGCATATGCTGGAGCTGCTATCTGGGGAAGTAGCCCCTCCATTGATGCTT ATAGGAATCATGTGTATATTGCAACCGGGAACTTGTACTCTGCCCCATTGCACATTCTTCAATGTCAAGAAAGACAAAAA AATCGAACCACGCCTACTGAACCAGACGAGTGTATTGAACCGGACAACCACTCTAATTCAATCCTGGCACTTGATTTAGA CTCTGGGATTATTAGATGGTACCGCCAGTTAGGAGGCTATGATGTATGGTTCGCTGCATGCAGTAATGTTTCAACTTCTT CTAAGTGTCCTCCTGAAGGTCCTACCCCAGATGCTGATTTTGGGGAAGCGCCAATGATGTTGACAACAAAAATAAATGGA ACCAGAAGAGAAATTGTTGTTGCTGTCCAGAAAAGTGGCTTCGCTTGGGCTTTAGATCGCAACAATGGCAACCTCGTTTG GTTTAAGGAAGCTGGGCCAGGTGGGATTTTAGGAGGCGGAACATGGGGTGCAGCAACTGATGAAAGGAGGGTTTACACCA ACATAGCAAATTCAGACAAGAAAAATTTCACTCTTGTACCATCAAATATGATTACAACCACTGGTGGGTGGGTAGCAATG GATTCTAGCAGTGGCAAAATTCTGTGGTCTATAGCTAACCCTAGTAATAGCTTTTGCAAAATTCTCTTTGTTGGATCCAC AAATAGAGTTGGAACCATATATGCAATCAATGCTAAAAATGGAAATTTTTTATGGTCCTTTGAAACTGGAGGCAGTGTTC ATGGAGGCATGTCAGTTAGCAATGGGTGCATGTATGCGGGTCATGGATATAGTGTTTCTCTGGGGTCTTTCTCTAACTTC ACAGGTGGGACTTCATTATTTGCCTTCTGTGTCTAA
Protein sequence (LotjaGi1g1v0500300.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MQLGCFRLNWTVSRSTPTVAGDLLIIGIYGPAVVIGLKRRTGELVWLTHLDNHPKAVITMSGTYYNGGYYVGTSSLEEGA SIEQCCIFRGSLAKLDARTGAILWKTFMLPDNNGKIGAYAGAAIWGSSPSIDAYRNHVYIATGNLYSAPLHILQCQERQK NRTTPTEPDECIEPDNHSNSILALDLDSGIIRWYRQLGGYDVWFAACSNVSTSSKCPPEGPTPDADFGEAPMMLTTKING TRREIVVAVQKSGFAWALDRNNGNLVWFKEAGPGGILGGGTWGAATDERRVYTNIANSDKKNFTLVPSNMITTTGGWVAM DSSSGKILWSIANPSNSFCKILFVGSTNRVGTIYAINAKNGNFLWSFETGGSVHGGMSVSNGCMYAGHGYSVSLGSFSNF TGGTSLFAFCV
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 5 | 392 | 388 | 1.2E-47 | – | |
| PANTHER | 7 | 411 | 405 | 9.8E-214 | – | |
| PANTHER | 7 | 411 | 405 | 9.8E-214 | – | |
| SUPERFAMILY | 12 | 376 | 365 | 7.46E-45 | ||
| Pfam | 14 | 193 | 180 | 2.2E-5 | ||
| SMART | 17 | 49 | 33 | 170.0 | ||
| SMART | 61 | 107 | 47 | 110.0 | ||
| SMART | 130 | 196 | 67 | 220.0 | ||
| SMART | 303 | 332 | 30 | 180.0 | ||
| SMART | 335 | 368 | 34 | 5.4E-5 | ||
| Pfam | 351 | 373 | 23 | 1.9E-5 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi1g1v0500300.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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