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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0502300 |
| Transcript ID | LotjaGi1g1v0502300.3 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | 60S ribosomal protein L34; TAIR: AT5G39785.1 hypothetical protein (DUF1666); Swiss-Prot: sp|Q8K385|FRRS1_MOUSE Ferric-chelate reductase 1; TrEMBL-Plants: tr|K7MUS9|K7MUS9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0502300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:101922063..101928584) extracted from Lotus japonicus Gifu genome v1.2.
CTAGCCCAATTTTGTTATCGTTTTGTCAGTCGACACCAATGAATGATATAAAAGAGAAGGCACAACAACATTCCCATTGA TTCATTCTCCTGATGGAAAAATTGCAAAATCCCCACGAGTCTATCTCATAACGGTACACAGAACACAACAGAATCCCATG GTTCTACGCAACCGAAAGATTAGCTCAAACACAAGTTGCTGACATGTTCTTTTCCTCACACATGTTTATGTTTTTTCTTT TCTTGATTTTCCATTCAATTTCCCTCATCAATTAGGTAACACTTCACCCTCTTGCTGAATCAGATTCACCCTGTGATAAC TCTAGGGTTGTACCTATATCCTTGTCTTTCAAGGTGCAAAGTCTCAATCCTTTTTGTAAAATTTTCAAAGTACAAATCAG AGTTTGCATGACCCTGCTCTGTTTTTTCTTCCTCTGTTTTGCTTCAAAAGGAATGGGTTCAGTTCTAAAGTGCCTTCAAG ATGTTTGTGTAAATTACCCTCTTGGTTTTTAGTGAGTATGGGTTCTCAGAAAGGTTTTTTCCATAGAAAGATGGAAATTT TTTCTGGGTATTTTGGGGTGTTTCTTTGGGTTTTCACCAAAGTGTTCATGAGGTATTGAATTTTCTTCCATTACAAATTT GAATACACTGTTCAATACCTATTCTTTACCTTCATCTATTTTTTGTTTTCTTTTTATTGTTTCAGATTCTATAGCCCTGA AGCAATGAACTCTGTTTGTTCTTCTAAATTTTCCCATGAAAATCAACTAATTGAGTTGAATCATTCTGAGCCAAAAACTG AGGATGAAGCTGGATTTTCTGATTCTTCCAGAGATACCTTATTGGAGTCTGAAAATTCTGGGGCATTTTCTGATGCTCTA TCACATGAAAGTAATGAAATTGAGTCTAATGGGTGCCAGCCAATGGCAGAAGCCATGAAAGATTGTTGTTCTGAAACTGC TATTGATGGTAGCGGGAATCCTGGCCTTGAAGAAGAGGAGACAAGTAAGCTGGTTTTCAAGTTCCAATACCAGAGTTGGA ATTGCAACTTCAATGAAGAACTCAAGGGAGATTATCATGAAAGTAGTGATTTTGTGGAGAGGGATACTGTTTCTGCAAGT GCCAACAAGTATGAGTTTTTCTCTGGCAAGAGTTTTAGCCACTTCTTGGAAGAACCTGAGACTGCAAATTTGACTGTTGA AGAGTTTCATGTTCATTCAAATGATGAGTTTCCATTGGAGAATCAGGTTACCAATGATTCTGAGGGTAAACTCATGCCAG AAAATTGTGAAGGGGTTGTTGATGCAGAAAATCATGACAATGTCACAGAAAGTGTACACAAAGAGGAGGTGTCATTAGAG AAGCTCAAGACTGTGTTATCTGTAGAACAACAATCTTTGCAACCTGTTACGCGTAATTTTCTTTCAGAAGATGATTTTAT TTGTTCAAGTTCTGATTCAGATTCTGTCACTTCTATGGATGATGGGTTTTTATCAGACACGGACTTTGGAACCACTACTG AGATTGACACATTGGGAAACAATGAAGAAGAAAATGCAGGGCTAACAGAAGAAGATTTGGACTTTTGGGATGAGAATTTG GATATTGGATATGAACCTGATGATTTTGCTGAAGAAGATGAAGATATAATGGAAGAATTAGGAAAAATAGAAGAAGAGTG TAGGCTTGAGAAATCTTCAGGGGACAGTTTTCAAGATAGCATCAAGTCCAAACCTGAAAATTCTGTGGAACCCAATTCAC TGAATTTAACAGCTAATGATCTTGAGGATTCTAACCGGTTTGACACACTGTGGGAGCATCAAGATTTGATAGAACAGCTC AAGATGGAGCTGAAGAAGGTTAGGGCAACTGGTTTACCTACCATCCTTGAGGATTCTGAGTCTCCAAGGATAATGGAGGA TTTGAAGCCATGGAAAATTGATGAAAAATTCCAGCATGGCAGTACCAAAAATGAGCTTCCAAAATTCTACAAGAGTTACA GAGAACGAATGCGGAAATTCGATATCTTGAATTACCAGAAGATGTATGCTTTAGGTGTGTTTTCTACTCTTTACCTTAAA TTTATTTTAATTTCTAAAGCAACTTTGTTTTCAAAATTTTCTGATTTACTGCCTTGTTCAAAGTGAGTGTGCTTCATCTA ATAACATGTTTGGATTTGTTTGTTTCCTTGGAATCAATTCTTTAACCCAGAAGCTACTCACAGTAGTTTCTCTTTAGGAT TAATTCAATTGTAAAAGTATTTCCGAATATGCGCAAAACCATTAGAACTAGAAAGGTAATTAGGGACCCACTAAATCTGG TTAGCTTGGGCACAGGGAAAGCATGAATTACCCAATATCTTCAGGCACAAGAATGAATTTTGAGACAATTAATACATTTA TTTTTGTCTCTTTTTCTAGGTGAATTGTTTTGGGTAGGGGGTACTCACCTTCAGTGCTATTTTGTTATTGAAAGAAAGTG AAGTTGAATTGGGGGTTGGGCATTAAGAGATTGAGCAGCTTTTTACACCACATGTTGGTTCTGCACATTGCATAACATAA ATGCTAATACTCCATACCAGATTCCAGCTAGCCTTGATTGCTAGTAGTAGTATTCTGTAATCTGTATGCATTTTTCCCAA AGACTGCCATAGTTAGTGTTAGGACTCTTTCATTGTGCATTTTTCTTGGAAGGAGTCATTGTTTTACTAAAGCTACCCAC AGTTTCTTATTGTGGCTAGCCTTGCCTAATTTCCCAAAGAAATCAGTCCCTACAATGACCTAGCACTTATTGTAATGCTC CACCAAATTTTTATATGACCTTTTCCTGTCTTTTTAAGCTAAACAACTCCTACCATGCAACACATGTTTCTTTTGGGATC TGAATTACTTCAAGTCGAGGAAACCTAAAATCTCTGCAGGAAGGGATCTAAAACATTCAAACTTAAATAGTTGAACTATA AACTACACCAAATCTCTGCAGGAAGGGATCTAAAACATTCAAACCTAAAATCTCTGCAGGAAGGTGTACTGTTCAGACTG CAGTAAATTTAGGATTCCCTTACAGGGAAAAAAAACCATATTCCCTTGAAAGCAATCTCCACAAAAGTTATGTTATTGAT GCTATTAGTGTGATGAGGATACTAATTACTACTAGCATAGGATCCATAATCAATTCTAGCACCTAGAAACTACTCTTGAT TTTGGCTTTATAAAAAAATTGTCCATGTTAAATTATAAAATAAAATTGACCATGTTAAGGTTCGCCAACTAACTATTCAT TTAATTTAATTTAACTTCTTTATTATTAAACACACGACCAATGGTTCAATGGTGAAACTTGACACAAGGAATGCTAGCAA TACACTCTTTGTGATTGGTTTATTTTTTGAAAAATTAACACATTTTTTCTCACTACCAATATCTGTGTTGAAATCTATTT TTAAAAAGAGTGTTGCTAGCAATTTTCAGTTGATGTAGTCAAGTTTTTTTCCAATTCACAGAGCAGTTTATTGTACTCGT TAGCATTTTCTAATATATTTTTATTATTGTTGAAGTGACTATTACATTATGCTTAACTTTTAAGTCTCCAATCATAGTCA CAAAATTGTCCTTTGAAGTTTCTTGGAAACTTGCAGGTTTCCTACAGTCAAAGGACCCACTCCAATCCTTTTCAACTCAC AAGAGCCCTTCTCCACCAATCACAAGCATTCTCCCTCTTCCACGCGGCTTTCACATTTACAGACGTAGAAAAATTGAAGC AGCTCATGACCCCACGAAGAAGTTCATGAGAGAATTGTACTGTGACTTGGAAACGGTTTATGTGGGACACTTGTGCCTTT CTTGGGAATTTCTTCAGTGGGAATATGGAAAGGCATTGGAATTATGGGAATCTGACGGGTACGGTATGAGAAGGTTCAAT GAAGTAGCTGGAGAGTTTCAACAGTTCCAAGTGCTTCTACAAAGATTTATGGAGAATGAACTTTTCCAGTGTCCGAGGGT TGAAAATTATGCTAGGAATCGTTGTGCCATGAAGAATCTTCTTCAAGTTCCAGTAATAAGAGGTGAGAACATTTAATTGA GAAACAATGTAGTCTTATATCTTTTGATAATCTATATAGCTGGACTAAAATACTCTTAGAGAGAATGATACAATTGGTGG AGTAATTTATGAGGATTATAATTAGTGAAAATAAGAGGTGTTAGGTGAGAGATATTGTTAATACCTCTATATATGGCAAA AACAATAAGTTTAGGGTTCACACTTTATTCACACCTACACTAGAGAAGGAAAATGAGAAATGATAAAGAATTGAGAGATA TAATAGAGTGATGTGATAGGAAAAGAAGAGAGTTGGAAAGAGAAAGTGAGTGAAAATGAGATGAAAGATAGTAAGGAGAG TGCGAATGAATCAATACTCTGGCAAAAAATAGATAAATCATCCCAAATTTCTAAAACAATAAAAGTGCTGAAAAAAAGAG GGGGGAACTAGTGGATGTTAGGTTTTAAAGTTTAGACATAAGTTAAGATATGTTTACTTTCTAGCTTCTAATCAGAAGTG ATTCTTGAACATTTCAATTTGGAACCAAACATGCTAGTAAATTTAATTGTAGTTTTTCAACTTCTCTCAAAGGGTGTCTG TCCTAGATGGACGAATAATAATTTTGTTTATAAAAATTCAAGCATAGAATTTTTTGTAATTCCCAACATACTTATTTTAA TTATATTGGTCTATCCATAATGAAATTATTTAGCACTTCTTAAACTAAGGTACACAGATTGTGTTTGGTTTCCATTTGAA AGCATATTCAATGAGATATTTGACTTATTGGATTGAGAAAAAGCAATTCACACCTAATCTAATATATAAACAAACACATT AAATTTGGTTAGTGTCTTTTTTTTTCAAATGGAAATGAGAGGTTACTTTTATTGTACTCCACTTTGTTAGGGTCCTTTTG AACTATGTGGGGGGACCAACTATGTAAAGTTTCATAGATGAGCCAAAACAGTTCCTCATGGTTGTAGAAGTTAACTTAAA TAATTGTCTGCAGAAGACAACGCCAAGGATAAAAAGAAGTACAGAGAAAGAGAGGCTGATAAGGATGCCATCACAAGCGG CATGCTAGTAGAAGTTTTGGAAGAATCAATCAGAACAATTTGGCGTTTTATAAGAGCCGATAAAGATGCATCTAGCTTGA AAGGTGCAAGAGAAAAGCAAGTAGAGCTACAAGACCCTTCAGATTCTGAACTTCTAGTGGAGATTCGAACAGAGCTTGAA AAGGTAAACCTCTTCAAAAGTCATATTTTTAAATGTCAAATGTGAATCAACTTTCTTTTGCTTTTTGAGAAAAGGTTGTG TTTTGAAATATAGAAAGCATAGATATCTCATCTCATAAACTTCGTATAACTAATTAAATGCACAATATATGGCAAATATT AAAAATTGTAGGAGATACAACAAGTAAAATTAATATATAATTCATATGCTAATATAAATTTTAGATCAGAAGACAAAATT GATATTTTTGAAGAGGTTTTCTTACTTAACCCGAGGGTTAAACAATCGTATCTTAGACAAAATTGATATTTTTGAAGAGG TTTTCTTACTTAACCCGAGAGTTAAACAATCGTATCTTAGGTGAATCAATGATTGTTTTTATAGAAGTTTTATTAAAAAA GTTTGATACAATTTTCAATAGACACTTACTAATATGCCCTTAGGCACGGCCATACGCAGTATAGAAATCACATTTGGATT CGCGATCAATTTCTAGGTTTTGCCGTAAATCTAATTGGTTACTTCGAAGTACAATAAACAAATAGCTATAATACCTGTCA AAGGTTAGCATGAGATATTTAAAACATAATAAAATGTTGTCGCATGACTAAATATTGCAATATGTATATCTGTAATTCTG TATTTCTAAAAGAACTCAAGTTGAAAAAACATGTAAGTAATATGATTAGAAGTCTACCACACAAATGTTATTTGATATGA GTGCGACATCACACGACAACTATTTCTAAGTGTTCATGTCATTCTTACTTTTATTCTCTATAATGTTATATATTGTTTTG ATTTGCAGAAGGAAAAGAGACTGAGAGAGCTTCTGAGGAGTGGATGCTGCATATTGAAGAAGTTCCAAAAGCACCATGAA GATGGGACGGATCAAGTGCTTTACTTCTTCTCTCAAGTGGATATGAAATTGGTTTGGAGAGTGTTGAACATGTCAAGGAT AACAACGGATCAACTAGCATGGTGTCGTAGTAAATTAAACAAGATCAATTTTGTAAACAGAAGGATACAAGTAGAACCAT CATTCTTACTTTTTCCTAGTTAGTAGTCAATTACAAGCTTAGTACATAGGCTTTAGAATGTCATTATCGAAATAGAAAAG AAAATTTTCATACAGCCATAGTATCTTTTTAGATGATTATATGAATTTAAAACGAATTGAATTGAATTCATTGCAAGTGT CATATAATTCTCCTTTATTTTATCTTGAATGAAAGAAAAAAT
CDS sequence (LotjaGi1g1v0502300.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAACTCTGTTTGTTCTTCTAAATTTTCCCATGAAAATCAACTAATTGAGTTGAATCATTCTGAGCCAAAAACTGAGGA TGAAGCTGGATTTTCTGATTCTTCCAGAGATACCTTATTGGAGTCTGAAAATTCTGGGGCATTTTCTGATGCTCTATCAC ATGAAAGTAATGAAATTGAGTCTAATGGGTGCCAGCCAATGGCAGAAGCCATGAAAGATTGTTGTTCTGAAACTGCTATT GATGGTAGCGGGAATCCTGGCCTTGAAGAAGAGGAGACAAGTAAGCTGGTTTTCAAGTTCCAATACCAGAGTTGGAATTG CAACTTCAATGAAGAACTCAAGGGAGATTATCATGAAAGTAGTGATTTTGTGGAGAGGGATACTGTTTCTGCAAGTGCCA ACAAGTATGAGTTTTTCTCTGGCAAGAGTTTTAGCCACTTCTTGGAAGAACCTGAGACTGCAAATTTGACTGTTGAAGAG TTTCATGTTCATTCAAATGATGAGTTTCCATTGGAGAATCAGGTTACCAATGATTCTGAGGGTAAACTCATGCCAGAAAA TTGTGAAGGGGTTGTTGATGCAGAAAATCATGACAATGTCACAGAAAGTGTACACAAAGAGGAGGTGTCATTAGAGAAGC TCAAGACTGTGTTATCTGTAGAACAACAATCTTTGCAACCTGTTACGCGTAATTTTCTTTCAGAAGATGATTTTATTTGT TCAAGTTCTGATTCAGATTCTGTCACTTCTATGGATGATGGGTTTTTATCAGACACGGACTTTGGAACCACTACTGAGAT TGACACATTGGGAAACAATGAAGAAGAAAATGCAGGGCTAACAGAAGAAGATTTGGACTTTTGGGATGAGAATTTGGATA TTGGATATGAACCTGATGATTTTGCTGAAGAAGATGAAGATATAATGGAAGAATTAGGAAAAATAGAAGAAGAGTGTAGG CTTGAGAAATCTTCAGGGGACAGTTTTCAAGATAGCATCAAGTCCAAACCTGAAAATTCTGTGGAACCCAATTCACTGAA TTTAACAGCTAATGATCTTGAGGATTCTAACCGGTTTGACACACTGTGGGAGCATCAAGATTTGATAGAACAGCTCAAGA TGGAGCTGAAGAAGGTTAGGGCAACTGGTTTACCTACCATCCTTGAGGATTCTGAGTCTCCAAGGATAATGGAGGATTTG AAGCCATGGAAAATTGATGAAAAATTCCAGCATGGCAGTACCAAAAATGAGCTTCCAAAATTCTACAAGAGTTACAGAGA ACGAATGCGGAAATTCGATATCTTGAATTACCAGAAGATGTATGCTTTAGTTTCTTGGAAACTTGCAGGTTTCCTACAGT CAAAGGACCCACTCCAATCCTTTTCAACTCACAAGAGCCCTTCTCCACCAATCACAAGCATTCTCCCTCTTCCACGCGGC TTTCACATTTACAGACGTAGAAAAATTGAAGCAGCTCATGACCCCACGAAGAAGTTCATGAGAGAATTGTACTGTGACTT GGAAACGGTTTATGTGGGACACTTGTGCCTTTCTTGGGAATTTCTTCAGTGGGAATATGGAAAGGCATTGGAATTATGGG AATCTGACGGGTACGGTATGAGAAGGTTCAATGAAGTAGCTGGAGAGTTTCAACAGTTCCAAGTGCTTCTACAAAGATTT ATGGAGAATGAACTTTTCCAGTGTCCGAGGGTTGAAAATTATGCTAGGAATCGTTGTGCCATGAAGAATCTTCTTCAAGT TCCAGTAATAAGAGAAGACAACGCCAAGGATAAAAAGAAGTACAGAGAAAGAGAGGCTGATAAGGATGCCATCACAAGCG GCATGCTAGTAGAAGTTTTGGAAGAATCAATCAGAACAATTTGGCGTTTTATAAGAGCCGATAAAGATGCATCTAGCTTG AAAGGTGCAAGAGAAAAGCAAGTAGAGCTACAAGACCCTTCAGATTCTGAACTTCTAGTGGAGATTCGAACAGAGCTTGA AAAGAAGGAAAAGAGACTGAGAGAGCTTCTGAGGAGTGGATGCTGCATATTGAAGAAGTTCCAAAAGCACCATGAAGATG GGACGGATCAAGTGCTTTACTTCTTCTCTCAAGTGGATATGAAATTGGTTTGGAGAGTGTTGAACATGTCAAGGATAACA ACGGATCAACTAGCATGGTGTCGTAGTAAATTAAACAAGATCAATTTTGTAAACAGAAGGATACAAGTAGAACCATCATT CTTACTTTTTCCTAGTTAG
Protein sequence (LotjaGi1g1v0502300.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MNSVCSSKFSHENQLIELNHSEPKTEDEAGFSDSSRDTLLESENSGAFSDALSHESNEIESNGCQPMAEAMKDCCSETAI DGSGNPGLEEEETSKLVFKFQYQSWNCNFNEELKGDYHESSDFVERDTVSASANKYEFFSGKSFSHFLEEPETANLTVEE FHVHSNDEFPLENQVTNDSEGKLMPENCEGVVDAENHDNVTESVHKEEVSLEKLKTVLSVEQQSLQPVTRNFLSEDDFIC SSSDSDSVTSMDDGFLSDTDFGTTTEIDTLGNNEEENAGLTEEDLDFWDENLDIGYEPDDFAEEDEDIMEELGKIEEECR LEKSSGDSFQDSIKSKPENSVEPNSLNLTANDLEDSNRFDTLWEHQDLIEQLKMELKKVRATGLPTILEDSESPRIMEDL KPWKIDEKFQHGSTKNELPKFYKSYRERMRKFDILNYQKMYALVSWKLAGFLQSKDPLQSFSTHKSPSPPITSILPLPRG FHIYRRRKIEAAHDPTKKFMRELYCDLETVYVGHLCLSWEFLQWEYGKALELWESDGYGMRRFNEVAGEFQQFQVLLQRF MENELFQCPRVENYARNRCAMKNLLQVPVIREDNAKDKKKYREREADKDAITSGMLVEVLEESIRTIWRFIRADKDASSL KGAREKQVELQDPSDSELLVEIRTELEKKEKRLRELLRSGCCILKKFQKHHEDGTDQVLYFFSQVDMKLVWRVLNMSRIT TDQLAWCRSKLNKINFVNRRIQVEPSFLLFPS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 60 | 60 | - | – | |
| MobiDBLite | 15 | 34 | 20 | - | – | |
| PANTHER | 32 | 752 | 721 | 3.3E-251 | – | |
| PANTHER | 32 | 752 | 721 | 3.3E-251 | – | |
| MobiDBLite | 35 | 60 | 26 | - | – | |
| MobiDBLite | 320 | 348 | 29 | - | – | |
| MobiDBLite | 330 | 348 | 19 | - | – | |
| Coils | 362 | 382 | 21 | - | – | |
| Pfam | 506 | 751 | 246 | 1.2E-94 | ||
| Coils | 659 | 679 | 21 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi1g1v0502300.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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