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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0509500 |
| Transcript ID | LotjaGi1g1v0509500.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | BAG family molecular chaperone regulator 8, chloroplastic; TAIR: AT3G29310.1 calmodulin-binding protein-like protein; Swiss-Prot: sp|Q9LIB3|BAG8_ARATH BAG family molecular chaperone regulator 8, chloroplastic; TrEMBL-Plants: tr|I1N4I4|I1N4I4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0509500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:102850235..102852614) extracted from Lotus japonicus Gifu genome v1.2.
CCAAAAGTAGCAGAAAAGCAAATTTGTTGGTTTTCAAATGAAGAAGTGATGAAAAAAATTAAAAGTACAACGTCAAACAA ACATCAAAGACCCTCAATTGTTCGTTTTAAAATATGATGACCTACTTCACGCAATCAATAGTAACGCTTGATACACCAAA AAAAAAATATATACAATTAAACATTTTTACATTTGGAGTGTATATGTTTTTTTACTTGTCCAAACTCCAACCCCATTTTT ATTTATCCCAACACCAAGCCCAATATCAAAAGTGAAACCATTTCTTTCTCCTCCTCTTAGCTCAGTTCAAACACTCCACA CTCACCATAGTCACAGTCAGTACCTTGAGAATTCACAGTTACACTGAATGGCCTCTCACCACCACCACCACCACCCCCCC TACCCCCATCACCACCAACCTTCTCCTCCTCCTCCTCCTAGCCACTGCTGCTGCAACCCTTCTTACAGCAACTGCTGCAC CACCACCCCACCACCTCACCACCCTTCTCCGCCGCCACCACCACACGACCACCTCGTACAAGCCATTGCCTCACTCCTCC TCTCCCAACCACACCTCATTCCCACTCAACTCCACCCCAAACCTCACACACGCGACAACCTCGATCTCAACACCCATCAC CTTAAACACCAACACCAAACCCATTCCACCATCTCCTCCCTCCTCGACCGCATCGAATCCCTCGAATCCTCCCTCAACCT CCACACCCACCAATCTCTCCGCCACGCCGCCGCGCGCGTGATCCAAACCCATTTTCGCTCCTTCCTCGTTCGCAGATCAA GAACCCTCAGCTACCTCAAACACCTCGCTTCCATCAAATCCTCATTCAACGCTCTCAAATCCTCGTTTTCCAGCAAACCC CACTTCGATTTCTCAGCTCTCTCCTTCAAAGCTATGAACTTGCTCCTCGAACTCGATTCTATTCAGGTAATCCAATCATG GGTATTTTTTATTTCATTCGAATTTTCTGTGTTACTTTTAGTCCCTGAAAAAAGTTTCAAACTTTGGGTTTAGGATTGTG ATCCAATGATCTTAGATGGGAAAAGGTCGATTAGCAGAGATCTGGTTCAGTTTTTGGACTCCATTGAAGAGGTTGCTATG AAAAAGCATCTTCATTGTGTCAAAGCAGTAAAGAATCCAAGGTATGGTCGGAAAGTTCAGAAACCTAAAAATGTAGGGGA TGAAGAAAAGAGGAAGTTGTTGCAGAACTTGAGGGGCAGGGTTGAGAGGATTAGCAAATTGTGTAATAACCCTTCTGCAA ATGGTGAAGATTTAGAGCCTGATGAGGGCATTTATGATCATGAGGATGAGGATGAGGATGGAGTAACTAATGTTTTGATG AGTAGGAGGAGTGAGGTGTCCGCGAACAAAAATGGGGGTTTTGTTCAAAGGCAAGGAGTTGTTCAGCCTAGAGTGAAGAA AAGTGTGAGATTTGCAGAGAATGGGAATACTTATGAGGTTTATAACAGCAGCACTTGTGAACCGGATCTGAATGGGGATG TGACGTGCTCAGAGGGAAGTTCATCGGGTGATGATCAAGTAGAGGTTTTGGAGAATGTGAGTTGCGCAGTTGAAGATGTT TTGGATTCTTCTCAGGGTGCCGAAAATGATGATAGTGTAGGATCACCACATAGCAGTGATGATGGTGAAAAGCTCTCAAG AAAGGGTCTCAGAAATGGTGGCAGAATTATAGTGAAAGAGCAGGTTCAAGGGCACCAGGAGCAGCTTTTGTTCTCTGCTC CATTGCCACTTAAGATGGAAAACAGGACTGATTCCAAGAAGAGTAAAGGTGTGAAAATTTTGACGTGAATGGCCATGACA TTATGATCATGTAAGCCAAAGTTTACATTTGAATTGTATTGTAAGAGTATTTGCTTGGACTTTTGAATGGTAGAGTTCAT TTGAGTATCTAATTGGTCTTTGGTTCTGTAAATGGACTTGTAATGTTTCACTTCAGTTGTTGTTTAGTAGTTTGAGACTA TCAGCAGTTCCCCAACATTCTTTGAAGTAACTTCATTTGTTTTCTCAATGTTAGTAGTATTGGCATGTGGCAATTGCCAC ATTGCTTTCCGGCTGATTGACTTAACCAGAGAAATAGACTTATTGTATGTTTGAATATCCTTCTACAGTTGACTCTAAAG TTAAAATTAATTCTATGATTCCATATGGCTGTACAAGAGAAGGAAAGATGTTTTCTTAATTTATTTAGGCCATATTGAAC ATCTGCACGATGACATCTCCTGTGATCGAATTCTTATGCTAATTCCAAAGTGTGCTTTTGGATATTAGTTTAGTTAACGT ATAAGTACATTCATCATGAGTTATATGAGATTCGTTCACTTTTTACCTTGATTACTAATC
CDS sequence (LotjaGi1g1v0509500.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCCTCTCACCACCACCACCACCACCCCCCCTACCCCCATCACCACCAACCTTCTCCTCCTCCTCCTCCTAGCCACTG CTGCTGCAACCCTTCTTACAGCAACTGCTGCACCACCACCCCACCACCTCACCACCCTTCTCCGCCGCCACCACCACACG ACCACCTCGTACAAGCCATTGCCTCACTCCTCCTCTCCCAACCACACCTCATTCCCACTCAACTCCACCCCAAACCTCAC ACACGCGACAACCTCGATCTCAACACCCATCACCTTAAACACCAACACCAAACCCATTCCACCATCTCCTCCCTCCTCGA CCGCATCGAATCCCTCGAATCCTCCCTCAACCTCCACACCCACCAATCTCTCCGCCACGCCGCCGCGCGCGTGATCCAAA CCCATTTTCGCTCCTTCCTCGTTCGCAGATCAAGAACCCTCAGCTACCTCAAACACCTCGCTTCCATCAAATCCTCATTC AACGCTCTCAAATCCTCGTTTTCCAGCAAACCCCACTTCGATTTCTCAGCTCTCTCCTTCAAAGCTATGAACTTGCTCCT CGAACTCGATTCTATTCAGGATTGTGATCCAATGATCTTAGATGGGAAAAGGTCGATTAGCAGAGATCTGGTTCAGTTTT TGGACTCCATTGAAGAGGTTGCTATGAAAAAGCATCTTCATTGTGTCAAAGCAGTAAAGAATCCAAGGTATGGTCGGAAA GTTCAGAAACCTAAAAATGTAGGGGATGAAGAAAAGAGGAAGTTGTTGCAGAACTTGAGGGGCAGGGTTGAGAGGATTAG CAAATTGTGTAATAACCCTTCTGCAAATGGTGAAGATTTAGAGCCTGATGAGGGCATTTATGATCATGAGGATGAGGATG AGGATGGAGTAACTAATGTTTTGATGAGTAGGAGGAGTGAGGTGTCCGCGAACAAAAATGGGGGTTTTGTTCAAAGGCAA GGAGTTGTTCAGCCTAGAGTGAAGAAAAGTGTGAGATTTGCAGAGAATGGGAATACTTATGAGGTTTATAACAGCAGCAC TTGTGAACCGGATCTGAATGGGGATGTGACGTGCTCAGAGGGAAGTTCATCGGGTGATGATCAAGTAGAGGTTTTGGAGA ATGTGAGTTGCGCAGTTGAAGATGTTTTGGATTCTTCTCAGGGTGCCGAAAATGATGATAGTGTAGGATCACCACATAGC AGTGATGATGGTGAAAAGCTCTCAAGAAAGGGTCTCAGAAATGGTGGCAGAATTATAGTGAAAGAGCAGGTTCAAGGGCA CCAGGAGCAGCTTTTGTTCTCTGCTCCATTGCCACTTAAGATGGAAAACAGGACTGATTCCAAGAAGAGTAAAGGTGTGA AAATTTTGACGTGA
Protein sequence (LotjaGi1g1v0509500.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MASHHHHHHPPYPHHHQPSPPPPPSHCCCNPSYSNCCTTTPPPHHPSPPPPPHDHLVQAIASLLLSQPHLIPTQLHPKPH TRDNLDLNTHHLKHQHQTHSTISSLLDRIESLESSLNLHTHQSLRHAAARVIQTHFRSFLVRRSRTLSYLKHLASIKSSF NALKSSFSSKPHFDFSALSFKAMNLLLELDSIQDCDPMILDGKRSISRDLVQFLDSIEEVAMKKHLHCVKAVKNPRYGRK VQKPKNVGDEEKRKLLQNLRGRVERISKLCNNPSANGEDLEPDEGIYDHEDEDEDGVTNVLMSRRSEVSANKNGGFVQRQ GVVQPRVKKSVRFAENGNTYEVYNSSTCEPDLNGDVTCSEGSSSGDDQVEVLENVSCAVEDVLDSSQGAENDDSVGSPHS SDDGEKLSRKGLRNGGRIIVKEQVQGHQEQLLFSAPLPLKMENRTDSKKSKGVKILT
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 24 | 24 | - | – | |
| PANTHER | 1 | 449 | 449 | 5.4E-107 | – | |
| PANTHER | 1 | 449 | 449 | 5.4E-107 | ||
| MobiDBLite | 271 | 293 | 23 | - | – | |
| MobiDBLite | 385 | 414 | 30 | - | – | |
| MobiDBLite | 396 | 414 | 19 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi1g1v0509500.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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