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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0512800 |
| Transcript ID | LotjaGi1g1v0512800.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Endo-1,3(4)-beta-glucanase 1; TAIR: AT5G15870.1 glycosyl hydrolase family 81 protein; Swiss-Prot: sp|D4AZ24|ENG1_ARTBC Probable endo-1,3(4)-beta-glucanase ARB_01444; TrEMBL-Plants: tr|A0A151TCH4|A0A151TCH4_CAJCA Putative endo-1,3(4)-beta-glucanase 2; Found in the gene: LotjaGi1g1v0512800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:103478316..103481009) extracted from Lotus japonicus Gifu genome v1.2.
GCTGTGTACTAATATTTGAACTATATAATGATTTTTATTACAAATAACGGTTCCAAAGGCAACACATATGCAAGAAGCTT CATTCTAACTTCTAAGGTCAACTTTCACCAATCCTCTCTAGTCTCTAATCTCACCAAAAACTCATATAAGAAGACAACAC CACCACACAAACAATTGCACCAACATCTCATCTTCTCTCCACCAACAACAATGCCTCCTTCTTCTCCTTTCCTCTTCCCT CAAACCCAATCCACAGTCCTCCCAAACCCTTCAACCTTCTTCTCCCAAAACCTCCTCTCATCTCCACTCCCCACAAACTC CTTCTTCCAAAACCTTGTCATCCAAAATGGTTCCCAACCTGAATACATTCACCCTTATCTCATCCAATCCTCAAACTCCT CCCTTTCTGCCTCATACCCACTTCTCTTCTTCTCTGCAGCACTCTTATACCAAACCTTTGTTCCAGATCTCACAATCTCT TCCACTATCAAAACCTCAAATCCTCAAAACCATGTAATCTCATCTTACAGTGACCTTGGTGTCACATTAGACATCCCCAG TTCCAATTTGAGATTCTATCTAGCCAGAGGAAGCCCTTACATAACAGCCTCAGTGACCAAACCAACACCACTTTCAATCA CAACAGTTCACTCCATAGTGTCTCTGTTATCCGCTGCTGACAAAACCAAGCACACCCTTCAGCTCAATAACAATCAGACA TGGCTAATATACTCTTCATCCCCAATCAATTTAAATAAACATGGAAGCTCTGAGCTTCAATCTGACCCATTTTCTGGGGT GATTCGTATAGCTGTTGTTCCTGATTCAACTTCAAACCCTAAGTATGAAGAAGTTCTTGACAAGTTCAGTTCTTGCTACC CTGTTTCTGGGGATGCAAAACTCAAGGGGAATTTCACCGTGGTGTATAAATGGCAGAGGAAAAATTCAGGGGATTTGCTC ATGCTAGCTCACCCTCTTCATCTCAAGCTTCTCTCAAAAAACAAGCTTGCTGCCACTGTTCTCTATGATTTCAAGTATAG AAGCGTTGATGGTGACCTTGTTGGTGTTGTTGGAGATTCATGGGTGTTGGAAGCTGAGCCTGTTCCTGTAACATGGCATT CTAACAGAGGAATCAAAAAAGAATCTTATGGGGAAATTGTTTCAGCACTTTTGAAAGATGTGAAGGAGCTGAATTATTCT GCAGTGGCAACAAATTCTTCTTATTTTTATGGGAAGCTTGTTGGAAGAGCTGCAAGGTTTGCATTGATAGCAGAAGAAGT TTCTTTCCCAAAAGTGATTCCAAAGATTGTCAAGTTTCTGAAGGAGAGTATTGAGCCATGGTTGGATGGAACATTCAAAG GAAATGGCTTTCTCTATGAGACAAAATGGGGTGGGCTTGTTACTCAACAAGGGTCCAAAGATGCAGGTGCTGATTTTGGG TTTGGGATTTACAATGATCACCATTTCCACTTGGGGTACTTTCTCTATGGAATTGCAGTTCTTGCAAAGATTGACCCTGC TTGGGGACAGAAATACAAGCCCCAAGCCTATGCACTTGTGAATGATTTCATGAACTTGGGACAAAGATACTACACTTTCT CTCCGCGGTTACGGTGTTTCGATCCTTACAAGATGCACTCTTGGGCCTCGGGGTTAACCGAGTTCGAAAATGGGAGGAAT CAGGAAAGTACAAGTGAAGCTGTGAATGCTTACTACTCAGCAGCATTGATGGGTCTAGCGTACGGCGACACACGTCTAGC TACCACTGGATCAACACTCACGGCACTGGAAATTGGTGCTACACAAATGTGGTGGCATGTGAAAAAGGAACAAATTTTGT ACCCAGAAGAATTTGCAGAAGATAACAGAATTGTGGGGATTCTTTGGGCTAACAAGAGAGACAGTAATCTATGGTGGGCT CCTGCTGAGTGCAGAGAATGCAGGTTAAGTATCCAAGTTCTACCATTGTTGCCTGTTACTGAATCTTTGTTCTCTGATGC TGGTTATGCTAAGGAGCTTGTGGAGTGGACATTGCCTTCTTTGAAAAGCAAATCAAATGTAGAAGGGTGGAAGGGGTTTA CCTATTCCTTGCAAGGGATTTATGATAAGGAAATAGCATTGAAGAGTATAAGAATGTTGAAAGGTTTTGATGATGGGAAC TCATACAGTAATCTGTTGTGGTGGATTCATAGCAGATAAGAGTAGTGATGTGAAGAATTTTTTGGACAAGTTCAATTGTT CAGGCTCATAGAAAGAATCTTGCAATCTGATGCTTCAATTTGACAATTTATTTATCAACATTTTTAATGTCATGTGATTT ATGAAATTATTTATACCTTATCATGATAGTTATGGTTATCATGGTGGCTTAAAACTGGAGTTTGGGATTTTCTTTTGTGT GTGAAGAAATTGCAGTTTAGTGTATTTTTCAACTGCTCTAGAAGTTAACTTCTCTACAATTTTTAATAATGTTTCTAGCT CAAGACTTGACTTCAATTGGTGGTAGAGCCAAATATGCAGCATGAGATTTGGGAATCAAAGTCAATGAATGATATTCAAA CTTGTTGAAACAAAAAAGCGACCCAAGTGTGTGGTTTCATATGATAGTACTTTTATTATTTAACAGTTGGTTGATTCAAG TGATATATACTTAATTTTCACTGAATAAAATGAATAACAATATTTTGTTGATGG
CDS sequence (LotjaGi1g1v0512800.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGATTTTTATTACAAATAACGGTTCCAAAGGCAACACATATGCAAGAAGCTTCATTCTAACTTCTAAGGTCAACTTTCA CCAATCCTCTCTAGTCTCTAATCTCACCAAAAACTCATATAAGAAGACAACACCACCACACAAACAATTGCACCAACATC TCATCTTCTCTCCACCAACAACAATGCCTCCTTCTTCTCCTTTCCTCTTCCCTCAAACCCAATCCACAGTCCTCCCAAAC CCTTCAACCTTCTTCTCCCAAAACCTCCTCTCATCTCCACTCCCCACAAACTCCTTCTTCCAAAACCTTGTCATCCAAAA TGGTTCCCAACCTGAATACATTCACCCTTATCTCATCCAATCCTCAAACTCCTCCCTTTCTGCCTCATACCCACTTCTCT TCTTCTCTGCAGCACTCTTATACCAAACCTTTGTTCCAGATCTCACAATCTCTTCCACTATCAAAACCTCAAATCCTCAA AACCATGTAATCTCATCTTACAGTGACCTTGGTGTCACATTAGACATCCCCAGTTCCAATTTGAGATTCTATCTAGCCAG AGGAAGCCCTTACATAACAGCCTCAGTGACCAAACCAACACCACTTTCAATCACAACAGTTCACTCCATAGTGTCTCTGT TATCCGCTGCTGACAAAACCAAGCACACCCTTCAGCTCAATAACAATCAGACATGGCTAATATACTCTTCATCCCCAATC AATTTAAATAAACATGGAAGCTCTGAGCTTCAATCTGACCCATTTTCTGGGGTGATTCGTATAGCTGTTGTTCCTGATTC AACTTCAAACCCTAAGTATGAAGAAGTTCTTGACAAGTTCAGTTCTTGCTACCCTGTTTCTGGGGATGCAAAACTCAAGG GGAATTTCACCGTGGTGTATAAATGGCAGAGGAAAAATTCAGGGGATTTGCTCATGCTAGCTCACCCTCTTCATCTCAAG CTTCTCTCAAAAAACAAGCTTGCTGCCACTGTTCTCTATGATTTCAAGTATAGAAGCGTTGATGGTGACCTTGTTGGTGT TGTTGGAGATTCATGGGTGTTGGAAGCTGAGCCTGTTCCTGTAACATGGCATTCTAACAGAGGAATCAAAAAAGAATCTT ATGGGGAAATTGTTTCAGCACTTTTGAAAGATGTGAAGGAGCTGAATTATTCTGCAGTGGCAACAAATTCTTCTTATTTT TATGGGAAGCTTGTTGGAAGAGCTGCAAGGTTTGCATTGATAGCAGAAGAAGTTTCTTTCCCAAAAGTGATTCCAAAGAT TGTCAAGTTTCTGAAGGAGAGTATTGAGCCATGGTTGGATGGAACATTCAAAGGAAATGGCTTTCTCTATGAGACAAAAT GGGGTGGGCTTGTTACTCAACAAGGGTCCAAAGATGCAGGTGCTGATTTTGGGTTTGGGATTTACAATGATCACCATTTC CACTTGGGGTACTTTCTCTATGGAATTGCAGTTCTTGCAAAGATTGACCCTGCTTGGGGACAGAAATACAAGCCCCAAGC CTATGCACTTGTGAATGATTTCATGAACTTGGGACAAAGATACTACACTTTCTCTCCGCGGTTACGGTGTTTCGATCCTT ACAAGATGCACTCTTGGGCCTCGGGGTTAACCGAGTTCGAAAATGGGAGGAATCAGGAAAGTACAAGTGAAGCTGTGAAT GCTTACTACTCAGCAGCATTGATGGGTCTAGCGTACGGCGACACACGTCTAGCTACCACTGGATCAACACTCACGGCACT GGAAATTGGTGCTACACAAATGTGGTGGCATGTGAAAAAGGAACAAATTTTGTACCCAGAAGAATTTGCAGAAGATAACA GAATTGTGGGGATTCTTTGGGCTAACAAGAGAGACAGTAATCTATGGTGGGCTCCTGCTGAGTGCAGAGAATGCAGGTTA AGTATCCAAGTTCTACCATTGTTGCCTGTTACTGAATCTTTGTTCTCTGATGCTGGTTATGCTAAGGAGCTTGTGGAGTG GACATTGCCTTCTTTGAAAAGCAAATCAAATGTAGAAGGGTGGAAGGGGTTTACCTATTCCTTGCAAGGGATTTATGATA AGGAAATAGCATTGAAGAGTATAAGAATGTTGAAAGGTTTTGATGATGGGAACTCATACAGTAATCTGTTGTGGTGGATT CATAGCAGATAA
Protein sequence (LotjaGi1g1v0512800.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MIFITNNGSKGNTYARSFILTSKVNFHQSSLVSNLTKNSYKKTTPPHKQLHQHLIFSPPTTMPPSSPFLFPQTQSTVLPN PSTFFSQNLLSSPLPTNSFFQNLVIQNGSQPEYIHPYLIQSSNSSLSASYPLLFFSAALLYQTFVPDLTISSTIKTSNPQ NHVISSYSDLGVTLDIPSSNLRFYLARGSPYITASVTKPTPLSITTVHSIVSLLSAADKTKHTLQLNNNQTWLIYSSSPI NLNKHGSSELQSDPFSGVIRIAVVPDSTSNPKYEEVLDKFSSCYPVSGDAKLKGNFTVVYKWQRKNSGDLLMLAHPLHLK LLSKNKLAATVLYDFKYRSVDGDLVGVVGDSWVLEAEPVPVTWHSNRGIKKESYGEIVSALLKDVKELNYSAVATNSSYF YGKLVGRAARFALIAEEVSFPKVIPKIVKFLKESIEPWLDGTFKGNGFLYETKWGGLVTQQGSKDAGADFGFGIYNDHHF HLGYFLYGIAVLAKIDPAWGQKYKPQAYALVNDFMNLGQRYYTFSPRLRCFDPYKMHSWASGLTEFENGRNQESTSEAVN AYYSAALMGLAYGDTRLATTGSTLTALEIGATQMWWHVKKEQILYPEEFAEDNRIVGILWANKRDSNLWWAPAECRECRL SIQVLPLLPVTESLFSDAGYAKELVEWTLPSLKSKSNVEGWKGFTYSLQGIYDKEIALKSIRMLKGFDDGNSYSNLLWWI HSR
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 65 | 723 | 659 | 0.0 | – | |
| PANTHER | 65 | 723 | 659 | 0.0 | ||
| Gene3D | 86 | 279 | 194 | 9.0E-20 | – | |
| Pfam | 88 | 364 | 277 | 3.3E-66 | ||
| Pfam | 369 | 719 | 351 | 2.9E-100 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Glucan endo-1,3-beta-glucanase activity, C-3 substituted reducing group | Catalysis of the endohydrolysis of (1->3)-linkages in beta-D-glucans when the glucose residue whose reducing group is involved in the linkage to be hydrolysed is itself substituted at C-3. |
Expression pattern of LotjaGi1g1v0512800.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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