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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0528400 |
| Transcript ID | LotjaGi1g1v0528400.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Trihelix transcription factor GT-4-like protein; TAIR: AT2G33550.1 Homeodomain-like superfamily protein; Swiss-Prot: sp|Q8VZ20|ASR3_ARATH Trihelix transcription factor ASR3; TrEMBL-Plants: tr|I1KWR2|I1KWR2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0528400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:105514153..105519642) extracted from Lotus japonicus Gifu genome v1.2.
TTCATAGATTAAGGGTCAACAACCTATTCAGTAAAAAAAATTAAAACCCCATTTTCACCAGCAAAAGCCACATACATTAG AAAACCCTCTCTCTCTCTCTCTCACTCTCTCTCTTTGATTTTTGATATATCTTGATTCTTCTTAATTCCAAGTGCTAAAC CCTTCTCTCTTATTTTTCTAAAACGCCGTAACGGGACATTCCAATTCCCAAAGGCACCGTCCCGTGCGAGTCACGTGCCA TTCAAAAACCCTATTCTTTTATGTCTTCCGAGCAACCTTCCAAACCCAACATAACCACCGTCGACGGCGAAATTGACGGT GCCGTTAACGGTTCGCCGCCGTTCGCGGCGGCTTCCGATGAGAGGCCCACGGCGAGGCTTCCACGCTGGACAAGGCAGGA GATCCTGGTTCTCATACAGGGTAAAGCTGATGCTGAAAGCCGGTTCAAACCGGGCCGTGCTGCCGGTTCGGCTTTCGGTT CGAGCGAACCGAAGTGGGCGCTGGTCTCGTCGTACTGCAAGAAGCACGGCGTGAACCGGGAACCGGTTCAGTGCCGGAAG CGGTGGAGCAACCTCGCCGGCGACTATAAGAAGATCAAGGAGTGGGAGTCGTCGGTGAAGGATGAAACGGAGTCGTTTTG GCTGATGAGGAATGATTTGAGGAGGGAGAGGAAGTTGCCGGGGTATTTTGACCGGGAGGTGTATGATGTTCTCGACGCGC CGGCGTTGCCGGTTTCTGCTACGGTGGTTCCGGCGATTGAGATGGCGCCGGAGGTGGTGGCTCGTGAGGAGGAGGTTCAC ATTTATGATAGTAATCGGAGGGTGGCTGGTGAAGATGGGTTGTTTTCGGATTGTGAGAAGGATGAGGTTTTGGCTTCTGT TAAGAGTGTGGCTGCTCCTGTTCCTATCTCAGGTTCGTTTTTTCAATGGATTTTTGGATACCCTTTGTGATTTTATCAAC TCCTATAAGCTATAATCATGTTGTTGTTGGTGTTTTGGTTTTGTGTAGTGTCTATTGGTATCTAGCAATGCTGTTTGTGT TGTCTTCTCTGTTATGAGGTTGAAAAGTTTCTAGGTTTGTTTATAGGTTTCATGGTTTTTAGGACATTTTTTTTGTGATT TGCATGAACTACTACTGTCATGTCATGTCATGTGATTTTGGTCCTCTTAAACTCTCTTGATTCTTCTAGTAATGATGTTG TTGTTACTTGTAAAGTTGGAAGATTTGGAGGCTAGGGTTAATGGGATTATAATGGGGGCGATTTCATTCTCCTTTGATTT TATTTTTCCCTTCTGATTTACAGAGAAACAATTCCTCTAGTTGTTTGTTCTTTCATGGATTTTGGGACACCCTTTGTGAT TTTATGAACTCCTCAAATTATGCTTTTGTTTTTATTCACTTTTGGTTTTATCTCTCTTTATTTTTTGGCTTGTCTCGTGT ATTTAGGTATAGAGCCATGCATTTAGTGGTGTCTCTTATGAAGTTTGAAAATTTGTTGGTTGGTGTTCATGGTTATGTGG ACACTATCTTTGTGTGATTTTACAAAATACTGCTGCCTTTAGCATGGTTGTTAAACTCCAGTTTTAACACTTAAAAAATA CGACTGAGTTTCAGATCCTATGTGCAAAACGGCATTTCATAACGTTATCTTTGCATTATTACTTTTATTCTTTACGAATC CCTCTCTCTTGTGTCCTTTTTCTTCTAATAACTCTTTGCCCGTTGCGCACAGGAGTGAGCTGCTGTAGCATTACTAGATT TTCTACATATCCTGTGATTTTTGAATTTTTAGGTTATGTAAATTCTTCTTCGTTTCAAATTATGAATTGATAATTAGAAG CGTAAAAAATAGTTGATTTTGCCTCTTGTATGAAGATCATAACTTCTTTGCTCGTTTGAAGTTTTTAGTTTCTTACCTTC TGAACTTGTTAATTTTTTGTTCTGAACTCAAATTTAGTCATTTTCTGTTTGATTTTAACTTCTTCATATAACTTTCTCAT TGTGTAAATTTGCTATTTAAGTATGGTTTTAATTTCTTTATCGTATTTTTCATCATTATTATGGTTTTCTAAATATTTTT AGATGACGTTTTGCTATTTAAGTATGGTTTTAATTTCACTATTGTATTTTTCATCATTATTAAGGTTTTCTAAATATTTT TACATGACGTGAACTCGTAACATTAACTCTTACGAGTTTACGAGCACTCCACGGGTGTATGTAAACTGTCAACCTTGCTG TCTAGTGTTTTTGTCTTTGTCCATTAAATTCTTTTGATTCTACCAATGGTGTTTGTTGTTGTAAAGATGGAAGATTTGGA GGCATGAATTGCTTGGATTATTATGTGGCACTCTTTTAACTCTTTGGTTTTCTTTGAACTTTTTCTTATGATTCCAGAGA AGCAATATCTACCACTCCTCCGTGGCTGCCAAGTGGAAAGCAATGGCCAAGGTAATAGAGTTCTTGATGGATTTGATAAT AAATTGAAATGCTTTGTTTAGTTTCCGTACGGAAGTGGTATGGTTAGCATTAGCGGTTAGCACTGGTATATGTTCAGGTG ATACCTTATATTTGTTTGGTTATGGATTCTTGTTCTATTTTAGAGTTAGCTTTGGTATTTATTGGTAAAAGCTTAAGCCC ATACTTATCTGACCATTGACCAAGATGATGAATAGCCCTTATATATGTTTCGTTATGGCTTCTTGTTCTATTTTATAGAT AATATTGGTATTTATTGGTAAATGCTTACGCCTATGCTTATCTGACCATTGACCAAGATGATGTAATAGCCCTTAAGCTT AATGCTTATTTTAGTTGAAGTTCATTCAATGTCAATGTGAACAACATAAAAACAGGGTAGCTACTCTATGTTCTTTCTTT GTTTTTAAATTATGGGGAATTGTGCTTTCAGACCTCTTAACTCTCAAGTAAGCTAAAAATCCATTTGTGTCGAATTAAAC CGCTTAGGCGAAACCAAGTGTTCCAAAATGGTCTGAAGGGAAAAAAAAGTCCTTAACAGAACATTATGGAAATGTTGTAT TTGCCGGTCCTAAAACTTTTATTCTAGATATTTCCATTAGTCATTGTTAATTTTATTTGAGGCGTTAAATTTCGCCCCCT TACCTAATTTTTTGGTTCCGTCCCTGCACATAGGGGCGCAATTTAATCCAGCGATTTCCACGTCGTATTTATGTTTATAT TTTCCTTACCTAATAGGTTTAACATTTTTGTGATTGACTTAGTGTGTGCTTGGATACCGGCTAATTGGAACGTGAATGGT TCATCCCAATCCATAGGAGGATTTCCGTTCACTTTTTTGTTTCAAAGTGTGTGCTAACATCTGTTTCCCCCTGGTGCTAA CGAATATCTGAACATAGCCTTACTATGTTTACCGTTCCTGTCCTAGCTGCATTCTGATTAAAGGCCTGAGCAGGGTCAAT TGCTTAATCATTTCTACTTTGGTTTTCTGCTATTAATTACATTTGAAATTTAAGGATAAGTGTGTCATAAACCATCTTTT TATATGGGATGTAGATTCAGGAACTGGTAGTGTAGTCATCCAATGCGTGATTGTTTACTTAAACGCTCCGATATAAATCA TGTGTTTCTAAAATGAATTTGCTTGATGTTCCATAGAATACAGATTTGAATGAATGATTTTAAATGTTATATTTGCCTGA GAAATGCTGCTTAGAGCTTCGTGCTTAATGCTAATGCCTGCACTCTTCTGGGAAAGTCATTGTATTGCACTTACGCACTT AGTCTCATTGTGTCTATTTCTGTAATGGTTCACATTCTACACATCCACAAATACTATGAGGTACTATCTATGTCTCCAAA GAATATTATTCACTAATCATTAATGGCAAGCTGTTTTAGAGCCACACTCTTTGACTATGGCATAGCTTAAACTTTTGTGA TTTAGCGAGGATGTGACTTCGTACATGTTTGAAACTCTTCTACAATTAACTCTGAAGCTAGAATTGATTGTGCGCAGAAG CTTATGTGAGCAGCTTCTTGGTTTTATAATTTATTTTGATGAACGAGAAACTGATGTTTTTCATGTAATTCCTATTATTG CATAGGGTCAAAGATTTTGGTCTAACTATCACACTGTAATTTTATAGGTACCCCCAATGAGAAACAACCAGCCTCAAACC CAGAAGTGGGTTCCACATCTCAAGGGGAACGGAAGAGGAAGCGGTTAGCGACCGATGCAGCAGAGGAGGAAACTTTGCAA ACTCAATTAATTGATGTCTTGGAGAAAAATGGGAAGATGCTACGCGATCAGCTTGAGGCTCAGAACATGAATTTCCAGTT GGATCGCCAGCACCAGAAAGACACTGCAAGTAGCATAATTGCTGTGCTTGATAAGCTTGCAGATGCTCTAGGGAGAATTG CTGATAAGTTGTAGTGCAAAGAAGGATCAGAATAGTGTACATAACAGTTGGGCTCAACAATAGTGGTTGGTTCCCTTCAT TTTTATCTCAGGATAGCTTCTAGGAAGACCCTTTATTTAGTGCTTGTTTGGAAACCTGTTTATAACTGATTCTGAAGTCA GAATTGATTATTGGGAGAAGCTTCTCTGAGTAGCTTCTGGGTTCCAGAATTGATTATGATGAAAGAGAAGCTGATCCAAA CATGCTATTATTCTGTTTGCATACACAGATTTTTTTGTGGTTTATTACTGCCATAATAGGATTATTATTATATACTCAAA TTTGGAGGTTAATGCATTTATTCTCTTCTTTCATTAAGGTACTAGTACTTTTACCCGTGCGATGCACGGGATCTTCTTTC TAGTTTATTGCGTCTTTAAAAAAATATGTATTGTATTTATTATGTTTGTTAAAGGAAAATTTAAGGATTTAAAAAATTAA TTATATATATAAGAAAAGATTTTTTTTTGTTGATAAATGTGTTTGTTTATATTTTGTAAAAACGTAATCATTTTATTTAT GTGGTTTTTACCCCTATTTTACAAAATGCTACATTATTTAATTTTCTCCTATAGAAAAATTTAAAAATTTTTGAAGTCAT TTTTAACTTAAATTTTTATCAATTTGTATTATTGTTTATTATATTTATATTTTTTCAATTAATTTGTACTTATTTGAATT ATGTCTTTTTTTCTTACAAAGAAAATGTAGTACCATGAAAATAATAGGCTTAATTGCACTTTTGCTCCCTGATCTTTCAC CTTTGTGCGATTTACCTCCCTCATCTTTAAAATGAGCGAATTCCCTCCCTCTTCTATTAATATGTGCGATTTAGACCTTT CCGTTAGTTAGCCGTCCAATTACTAACGGCGGTTGCTATTTTCACCCTCCCTTTTACTAACCACACCCTCATATCAGAAA TAAAAATAAAAATAAAATAAAAAAAATGGAGGTAAATCGCACAAAGGTGAAAGATCAGGGAGCAAAAGTGCAATTAAGCA AAAAAATAAAAAATAAATTAAATACAATTAATAGAAAATAAAAAAAAACT
CDS sequence (LotjaGi1g1v0528400.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTCTTCCGAGCAACCTTCCAAACCCAACATAACCACCGTCGACGGCGAAATTGACGGTGCCGTTAACGGTTCGCCGCC GTTCGCGGCGGCTTCCGATGAGAGGCCCACGGCGAGGCTTCCACGCTGGACAAGGCAGGAGATCCTGGTTCTCATACAGG GTAAAGCTGATGCTGAAAGCCGGTTCAAACCGGGCCGTGCTGCCGGTTCGGCTTTCGGTTCGAGCGAACCGAAGTGGGCG CTGGTCTCGTCGTACTGCAAGAAGCACGGCGTGAACCGGGAACCGGTTCAGTGCCGGAAGCGGTGGAGCAACCTCGCCGG CGACTATAAGAAGATCAAGGAGTGGGAGTCGTCGGTGAAGGATGAAACGGAGTCGTTTTGGCTGATGAGGAATGATTTGA GGAGGGAGAGGAAGTTGCCGGGGTATTTTGACCGGGAGGTGTATGATGTTCTCGACGCGCCGGCGTTGCCGGTTTCTGCT ACGGTGGTTCCGGCGATTGAGATGGCGCCGGAGGTGGTGGCTCGTGAGGAGGAGGTTCACATTTATGATAGTAATCGGAG GGTGGCTGGTGAAGATGGGTTGTTTTCGGATTGTGAGAAGGATGAGGTTTTGGCTTCTGTTAAGAGTGTGGCTGCTCCTG TTCCTATCTCAGAGAAGCAATATCTACCACTCCTCCGTGGCTGCCAAGTGGAAAGCAATGGCCAAGGTACCCCCAATGAG AAACAACCAGCCTCAAACCCAGAAGTGGGTTCCACATCTCAAGGGGAACGGAAGAGGAAGCGGTTAGCGACCGATGCAGC AGAGGAGGAAACTTTGCAAACTCAATTAATTGATGTCTTGGAGAAAAATGGGAAGATGCTACGCGATCAGCTTGAGGCTC AGAACATGAATTTCCAGTTGGATCGCCAGCACCAGAAAGACACTGCAAGTAGCATAATTGCTGTGCTTGATAAGCTTGCA GATGCTCTAGGGAGAATTGCTGATAAGTTGTAG
Protein sequence (LotjaGi1g1v0528400.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSSEQPSKPNITTVDGEIDGAVNGSPPFAAASDERPTARLPRWTRQEILVLIQGKADAESRFKPGRAAGSAFGSSEPKWA LVSSYCKKHGVNREPVQCRKRWSNLAGDYKKIKEWESSVKDETESFWLMRNDLRRERKLPGYFDREVYDVLDAPALPVSA TVVPAIEMAPEVVAREEEVHIYDSNRRVAGEDGLFSDCEKDEVLASVKSVAAPVPISEKQYLPLLRGCQVESNGQGTPNE KQPASNPEVGSTSQGERKRKRLATDAAEEETLQTQLIDVLEKNGKMLRDQLEAQNMNFQLDRQHQKDTASSIIAVLDKLA DALGRIADKL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 330 | 330 | 9.4E-172 | – | |
| MobiDBLite | 1 | 40 | 40 | - | – | |
| PANTHER | 1 | 330 | 330 | 9.4E-172 | – | |
| ProSiteProfiles | 35 | 106 | 72 | 6.818 | ||
| CDD | 41 | 113 | 73 | 9.9108E-15 | – | |
| Pfam | 42 | 129 | 88 | 6.5E-13 | – | |
| Gene3D | 43 | 112 | 70 | 6.7E-10 | – | |
| MobiDBLite | 229 | 267 | 39 | - | – | |
| MobiDBLite | 230 | 252 | 23 | - | – | |
| MobiDBLite | 253 | 267 | 15 | - | – | |
| Coils | 277 | 297 | 21 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi1g1v0528400.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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