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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0531400 |
| Transcript ID | LotjaGi1g1v0531400.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | WRKY transcription factor-like protein; TAIR: AT5G14090.1 regulator of nonsense transcript protein; Swiss-Prot: sp|Q5XV40|LAZY1_ARATH Protein LAZY 1; TrEMBL-Plants: tr|V7B073|V7B073_PHAVU Uncharacterized protein; Found in the gene: LotjaGi1g1v0531400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:105840633..105844313) extracted from Lotus japonicus Gifu genome v1.2.
TTTGTATGTATCTCTATGTTTTTCTTGTTGAATCCCTTCTATAGCACATCAAAAGGTTCTCAGCACTATCATGTGTGTTC TGGATAAACTGTCATCATTCAAGCACAATAAATTAGCAGGTTTTTTCATTAACCTTATCTTCTCAAGTTAGGCAATCAAA GCTCTCAAGTCCTGAATATCAAAAGATGAAGGTAAGGTCCACCATGACAATCATGCCTCCTTGCATAACCAAAATAGACT ATACATGTGATTTTCTAAGTTGGTTTCTGACATTCTGCATATCTTTGCTGCAGTTACTTGGTTGGATGCATAGAAAGTTT CGCCAGAATAGCAATGAACCTTTCAAAGACTTGGTCATTGGTAAGTCAAGTGCTGTAATTAGCAAGCCACATATTTATGT TCCTCCAAACATTCATTAACTAAGTTATGGGCATCAAATTAGTGAACAAAGGACACAAATCTTCTGTCCATTCTATGTCT CACTTTTCTGTACCACCAATGAGAGTTTGTCAGGTAAGTTAAAATTGCATGGGTGAAGTGATTACAAATATACATGACTT CCGTTTTTGCTGATATGTCAAATTCCCATTGGTGGGATAGACAAATGAGACACATTTGGGGACAGAAGATTTTGATCCGT GAAGAAAAGTATAATTAAGCATGGAAGCAGGATTTACTGATCATGCTAAAAGATAGATATCTTAGTTTATGATGACCATG GAATTATAGAAGCTTAGGAAGTCTTGAATACACATATGACCCCAAATATAGTCCATGAAGACAAAGCAGTGAAGTACTGA AGTACCAAACTAGAACCATTGAAAGCTATGGATGAAATTTGAAGTATTGATAGAAATAAATCTGAGTTCTTAGAATTGGA GCATAAAAAATAGACAATTTCAGATGTTGTTAAGGCTAAGAATATCAATAAAATCTCTTCTATTTCTTAGTCTAGGTAAA GCTTTTTTCTCCTGTCAATTGTGTAGAATACTAGCATGAGATCAGAATTAGACAAGGTCTTGTGTGGAGAAGTCTCACAT TGACTAGAGATATGAGTAAGCAAGTCCTTATAAAGTGTAGAGAAATTCTCACATTTGAGCTAGCTTTTGATGTAGAGTTA GGCCTAGCCCGAATTCTAAGATATGCTATTATGGAATTCCACATCAAGGTTTACTTAATAGTTACTCTAGTTCTTAGGAA ATTTTTTTGTTTCAGGGAATGCTTGCAATTGTCTTTCAGGGCAGCCATCACTTGATGATGAAGAAAACTACCTCAAACCA AGCCATGGGATCAAACCCTTCAAACAAACCCAGAAAAGCCAAAGTCTTAGGAAATCTTTTTCTGGTGTGGAAGCAACAGG AGTAGTAGATCATGAAGACTATGAGGGAGAAGAACCTTCAGCTGCTATGAGTGATCTCTTCCCTGGCTTCTTTTCAATTG GAACTCTTGGTTCAGAACAAGTAGTTACTTCTTACCCATCAACACCAACATTTGCAATCTCTGTTGAGAGCATAACTGAG AAAGAAGATGAAGTCACTGAGAATGATCTTAAACTCATCAATGATGAGCTAGAGAAAGTGCTAGGAGCTGAAACCAAGGA TGATGTTGTCAGCAATGATTCATCTAGCAGAAATAGCCATGTCAGCACTGGGAGAAGCAGCCATGTCAGCACTGGGAGAA GCAGCCATGTTAGCATAATAACACTCAGTGGAAAGCCAATAGATGGTGCTGCTGCAGAATCAAATGGGAATAATAATAAT GGAACTGCAATTTGTCCACTCCAGGAATATCTCTTTGGAACAGCTATTGAATTATCTGAAACAACAACTACAGTGGCAAA GAAAGAACACAGGACTTCACTTGGGGAGCTGTTTCAGAGAAGCAAATTAGCTGAGGAGAATTATGGTGCTAAAATTGAAA AGGAGGAAAGAAGAGCTGAGAGGGAAGGAGATAAATCTGCTATGAACTTGATGAAAGAGAAGCTGAAAAGAAGAATGTTG CATGCTTGTTCTAGGAATTCTACATCAACAAGTGGTGGCCCTTTTGATTCTGCTTCAGCAGATACAAAACTGAATAAGGT GCACATGCAGATTTTAAAGTTAGCCAATCAGTGTTTTCTATTTTCTCTTGTTTATCCTAACTAGAATAACTGTTACACAT AAGTCACTGCCATAATCTTTAGTAAGAATGCCAGTTATCAATTTGTGACATTCAAATTGTATCAGAAGATATTAGGGATG TCATATAAACTAACCAGCATTCTTCATATTGACTTTGAAGCTTTGCATTTTAATGTCCACTTTGGTCCCTATATTTTTTT TTGAATAGGAAAATGTTAGTTGTTAGTAAATTAGTACAAATTATTCCTCCTTAGGATTCGAATCCTAACCCTTCACCTAT AATTACCCTTAGCTCAACCATGTGAGCTACCCAACCCTTTGGGTCCGTACTTTTACAAAGAACTTTGATTTGAGTTCTTG TTTTGATGTGGCTAACAAAGGGCCATTTCACCATGGTCACATGCCCGCTAATCCTTTGTGACATATTTTACTTCCAAATC AAATCAATGACTAGCTCTTTTCATAAATAAATCTAAGAAAGGTTATCATTTCTTGATCTCTAAATTTTTTTTATTAAAAA TGTTAGCTATCATGATTTGGCCGCAACATAGGCCATATAAGATTACTCTTGACAGTGACAATGGTGACATGGCCCTCTGC CAGCCACATCACCAGTTAAAAGTGGATTTTAAAATGAGGACTGAAACAAAAGTTATTTGTAAAAGGACCGAAACCAGAAA AATTAGATGGTAGGAACCAAAACCAAATTAGAGTGTAAAATGAGGACTAAAAGCTTATTTAAGTGATTGATATGTTATTT ATTCTTGATCTTACTTTTAGAAGATCATTAGTATTGTTCTGGTCATGACTTCATCAGTATTTTGATTTTCTCATGATAAC TTGTGGTTGTGGCTTTTAGATTCTTCATATGTTCCGCAAGAAAGTTCACCCTGAAAGCTCAACAGCTGCACACAAGTCAA CTAAGCACAGAAAGAATGAGAACAAGAAGAAGATAATCAACGATGGAGGCCACACCAAAGGTGACCTGGGGCATCCAGAT GAAGACTCATCTGCTATCAGGGAGCATTGGATCAAAACAGATGCAGATTGTAAGTATGCAATGAGTATATTCTTACATGT ATATTTTCAACTTATTTCAATAAGTATCTTAAATTAGCTTATGAATAAGCGTATACACGATAAACGCTTAATTAAGTTGT TTACACAAACACACCCTTAGAGCCATTTGATTTGGTTGGCTAATGAATTGAGTTTCATTTACATACCAAATTGCCAAATT GTTTTTTTTTTAACACTAAAATATCTCATTTGCCTTTGTAGCAATCAGTGCCCACTTTCAGTTTCAGTCTTGTATGCAAC TTCTTTCTACCTGATTCAGTTTGTTGTTGTGTGCATTGCAGACTTAGTTCTAGAGCTCTGAAAGGCAAAGAAGAACTGAG CTGATTCTAAGTGTCATATCCTCTATTTGTAATAAGTAATGTTGTGTTTGTGCTATAATTTTAATTATTTGTCAGTACTT GTAACAAAAACCAAACTTGCTTATTATACAAGAAACAGCTTGGGTGGAATGAACGAATAATTGAGGTAGTCAGCTTCAAT G
CDS sequence (LotjaGi1g1v0531400.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAAGTTACTTGGTTGGATGCATAGAAAGTTTCGCCAGAATAGCAATGAACCTTTCAAAGACTTGGTCATTGGGAATGC TTGCAATTGTCTTTCAGGGCAGCCATCACTTGATGATGAAGAAAACTACCTCAAACCAAGCCATGGGATCAAACCCTTCA AACAAACCCAGAAAAGCCAAAGTCTTAGGAAATCTTTTTCTGGTGTGGAAGCAACAGGAGTAGTAGATCATGAAGACTAT GAGGGAGAAGAACCTTCAGCTGCTATGAGTGATCTCTTCCCTGGCTTCTTTTCAATTGGAACTCTTGGTTCAGAACAAGT AGTTACTTCTTACCCATCAACACCAACATTTGCAATCTCTGTTGAGAGCATAACTGAGAAAGAAGATGAAGTCACTGAGA ATGATCTTAAACTCATCAATGATGAGCTAGAGAAAGTGCTAGGAGCTGAAACCAAGGATGATGTTGTCAGCAATGATTCA TCTAGCAGAAATAGCCATGTCAGCACTGGGAGAAGCAGCCATGTCAGCACTGGGAGAAGCAGCCATGTTAGCATAATAAC ACTCAGTGGAAAGCCAATAGATGGTGCTGCTGCAGAATCAAATGGGAATAATAATAATGGAACTGCAATTTGTCCACTCC AGGAATATCTCTTTGGAACAGCTATTGAATTATCTGAAACAACAACTACAGTGGCAAAGAAAGAACACAGGACTTCACTT GGGGAGCTGTTTCAGAGAAGCAAATTAGCTGAGGAGAATTATGGTGCTAAAATTGAAAAGGAGGAAAGAAGAGCTGAGAG GGAAGGAGATAAATCTGCTATGAACTTGATGAAAGAGAAGCTGAAAAGAAGAATGTTGCATGCTTGTTCTAGGAATTCTA CATCAACAAGTGGTGGCCCTTTTGATTCTGCTTCAGCAGATACAAAACTGAATAAGATTCTTCATATGTTCCGCAAGAAA GTTCACCCTGAAAGCTCAACAGCTGCACACAAGTCAACTAAGCACAGAAAGAATGAGAACAAGAAGAAGATAATCAACGA TGGAGGCCACACCAAAGGTGACCTGGGGCATCCAGATGAAGACTCATCTGCTATCAGGGAGCATTGGATCAAAACAGATG CAGATTACTTAGTTCTAGAGCTCTGA
Protein sequence (LotjaGi1g1v0531400.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MKLLGWMHRKFRQNSNEPFKDLVIGNACNCLSGQPSLDDEENYLKPSHGIKPFKQTQKSQSLRKSFSGVEATGVVDHEDY EGEEPSAAMSDLFPGFFSIGTLGSEQVVTSYPSTPTFAISVESITEKEDEVTENDLKLINDELEKVLGAETKDDVVSNDS SSRNSHVSTGRSSHVSTGRSSHVSIITLSGKPIDGAAAESNGNNNNGTAICPLQEYLFGTAIELSETTTTVAKKEHRTSL GELFQRSKLAEENYGAKIEKEERRAEREGDKSAMNLMKEKLKRRMLHACSRNSTSTSGGPFDSASADTKLNKILHMFRKK VHPESSTAAHKSTKHRKNENKKKIINDGGHTKGDLGHPDEDSSAIREHWIKTDADYLVLEL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 381 | 381 | 5.0E-188 | – | |
| PANTHER | 1 | 381 | 381 | 5.0E-188 | ||
| MobiDBLite | 150 | 181 | 32 | - | – | |
| MobiDBLite | 160 | 181 | 22 | - | – | |
| MobiDBLite | 320 | 361 | 42 | - | – | |
| MobiDBLite | 340 | 361 | 22 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Gravitropism | The orientation of plant parts under the stimulation of gravity. | ||
| Biological process | Regulation of auxin polar transport | Any process that modulates the frequency, rate or extent of auxin polar transport. |
Expression pattern of LotjaGi1g1v0531400.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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