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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0560500 |
| Transcript ID | LotjaGi1g1v0560500.3 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Neutral/alkaline invertase; TAIR: AT4G34860.1 Plant neutral invertase family protein; Swiss-Prot: sp|Q9SW48|INVB_ARATH Probable alkaline/neutral invertase B; TrEMBL-Plants: tr|K7KHF4|K7KHF4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0560500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:109277347..109279578) extracted from Lotus japonicus Gifu genome v1.2.
CCAGAAGACACACTATGTTCTGTGGCAGAAGTTGAGGAGTTTGATTTCTCCAAAGCATTAGATAAGCCAAGGCTTTTGAA TATAGAGAGACAGAGGTCATGTGATGAAAGATCAATGAGTGAACTATCCATAGGCTTTTCTCCGCGTCAATTGTCCACTA AACCTGACAACTATTATCGCCTTCCCGACCATCTTGACAACTCATTTTTTCTTCTGCCAAAATCAGGTCTTAATACTCCA AGATCACTCATATTGGATCCACATCCATTGATAGTGTCTGAAGCTTGGGAAGCTCTCAGGCGTTCCTTAGTATATTTTCG CGGTCAGCCAGTTGGGACAATTGCTGCCTTGGATAATTCTGATGAGAAGCTTAATTATGATCAGGTACCATGCTTTAATC ATGTCCAAAGTAACTGTTTCTTCTATGTCCTTTTTTAGTGGGGATTTGGGGTTGGCACAATTTCATAACACACTTGAATT TTGGTTATACTTTATGGCCTAAGGTTTTGTATGAATCTATACTTATAATTCTAGTGATATGAATTAAATCCACCAATCCC GCTACACAATCTAGATTATTAACATGTTTGGTTCGAAAGTGAAATGTTTTAGAATCTGTGTTAGAAGTCTCACATTAGCT AGAGATACGGCCAAACAAGTGTTTATAAAGGGTAGAACAATTATCAACTCTTGAGCTAGCTTTTGGGTTGAGTTAAGTTT CCCAATTTCTAATATGGTCAAAAGCTTAAGTCTTAGCTTCTAAGTGAACTTGTATTGGATTATGTGAAAATCATGAAACC AAACATTCACGAAGTGAACTTGTATTGAATTATCTGCTATTTTGAGTTTGCTACTGCGGTCTAATCTATCTAAGGTATTA AATTTGTGTATAGGTGTTTATAAGAGACTTTGTGCCGAGTGCTTTGGCTTTTCTGATGCATGGGGAACCAGATATTGTTA AAAACTTTATTCTAAAGACCCTTCGCCTTCAATCATGGGAGAAAAAGATTGACAGGTTCCATCTAGCGGAAGGGGTAATG CCTGCTAGTTTTAAAGTATACCATGATCCAGTCAGAAACCATGAAACCCTGATAGCAGATTTTGGTGAAAGTGCAATAGG AAGGGTTGCTCCTGTTGATTCTGGATTTTGGTGGATTATCTTACTCCGTGCATACACAAAGTCTACAGGAGACTCTTCTT TGGCTGAACGGCCTGAGTGTCAAAAGGGTATGCGCTTGATTCTAAGTTTATGCCTGTCAGAGGGGTTTGACACATTTCCA ACGTTACTATGCGCTGATGGATGTTGTATGATTGATCGTAGAATGGTGAGTTTTCTTAAATTTATGATACCCTCATTTTT ACATTGTTTACTGTCTTTAATCTAGGCCCTAATTGTTGGATAAGATGATTGTTCCATTCCAGGTTTTTCCAATTTCATAG ATTTATCATTTAATCCTGCATACAAAGTAAAGAGATAATCTGTTTCTATGCAAGTGCCAACTGAATAATAATTCATGAGT GAATAGAATGACTATATGACAGAATACAGTAATTCTAAATGTATGTACTTTTATTCCTAGTGGTTGATTTATCCAATTCT TACTTTCAATTATTTATTTGTGAATTCAGGGTGTTTATGGGTATCCAATAGAAATTCAAGCATTGTTCTTCATGGCTTTA AGATGTGCGTTGCAATTGCTTAAGCCAGATGCTGAAGGGAAAGAGTTCATGGAACGGATTGTCAAACGCTTGCATGCCTT GAGCTACCATATGAGAAGCTACTTTTGGTTGGATTTGAAGCAACTCAATGATGTTTATCGCTTCAAAACAGAAGAGTACT CACATACTGCAGTCAACAAGTTTAATGTCATTCCTGATTCTTTACCAGATTGGGTTTTTGATTTCATGCCTCATCATGGT GGATACTTTGTAGGGAATGTCAGCCCTGCTAGGATGGATTTCCGCTGGTTTTGTCTGGGCAATTGCATTGCAATTCTGTC TTCCTTGGCAACTCCTGAGCAGTCAGTTGCAATCATGGACCTAATAGAATCACGGTGGGAAGAGTTAATTGGGGACATGC CTGTCAAAGTTTGTTATCCAGCCATTGAAAGCCATGAATGGAGGATCGTAACAGGATGTGACCCTAAAAATACTAGATGG AGTTACCACAATGGTGGATCTTGGCCAGGTACTTCTATCCTAAGCTACCATTCTTAATTTCAAGCAATATAG
CDS sequence (LotjaGi1g1v0560500.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAGTGAACTATCCATAGGCTTTTCTCCGCGTCAATTGTCCACTAAACCTGACAACTATTATCGCCTTCCCGACCATCT TGACAACTCATTTTTTCTTCTGCCAAAATCAGGTCTTAATACTCCAAGATCACTCATATTGGATCCACATCCATTGATAG TGTCTGAAGCTTGGGAAGCTCTCAGGCGTTCCTTAGTATATTTTCGCGGTCAGCCAGTTGGGACAATTGCTGCCTTGGAT AATTCTGATGAGAAGCTTAATTATGATCAGGTGTTTATAAGAGACTTTGTGCCGAGTGCTTTGGCTTTTCTGATGCATGG GGAACCAGATATTGTTAAAAACTTTATTCTAAAGACCCTTCGCCTTCAATCATGGGAGAAAAAGATTGACAGGTTCCATC TAGCGGAAGGGGTAATGCCTGCTAGTTTTAAAGTATACCATGATCCAGTCAGAAACCATGAAACCCTGATAGCAGATTTT GGTGAAAGTGCAATAGGAAGGGTTGCTCCTGTTGATTCTGGATTTTGGTGGATTATCTTACTCCGTGCATACACAAAGTC TACAGGAGACTCTTCTTTGGCTGAACGGCCTGAGTGTCAAAAGGGTATGCGCTTGATTCTAAGTTTATGCCTGTCAGAGG GGTTTGACACATTTCCAACGTTACTATGCGCTGATGGATGTTGTATGATTGATCGTAGAATGGGTGTTTATGGGTATCCA ATAGAAATTCAAGCATTGTTCTTCATGGCTTTAAGATGTGCGTTGCAATTGCTTAAGCCAGATGCTGAAGGGAAAGAGTT CATGGAACGGATTGTCAAACGCTTGCATGCCTTGAGCTACCATATGAGAAGCTACTTTTGGTTGGATTTGAAGCAACTCA ATGATGTTTATCGCTTCAAAACAGAAGAGTACTCACATACTGCAGTCAACAAGTTTAATGTCATTCCTGATTCTTTACCA GATTGGGTTTTTGATTTCATGCCTCATCATGGTGGATACTTTGTAGGGAATGTCAGCCCTGCTAGGATGGATTTCCGCTG GTTTTGTCTGGGCAATTGCATTGCAATTCTGTCTTCCTTGGCAACTCCTGAGCAGTCAGTTGCAATCATGGACCTAATAG AATCACGGTGGGAAGAGTTAATTGGGGACATGCCTGTCAAAGTTTGTTATCCAGCCATTGAAAGCCATGAATGGAGGATC GTAACAGGATGTGACCCTAAAAATACTAGATGGAGTTACCACAATGGTGGATCTTGGCCAGGTACTTCTATCCTAAGCTA CCATTCTTAA
Protein sequence (LotjaGi1g1v0560500.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSELSIGFSPRQLSTKPDNYYRLPDHLDNSFFLLPKSGLNTPRSLILDPHPLIVSEAWEALRRSLVYFRGQPVGTIAALD NSDEKLNYDQVFIRDFVPSALAFLMHGEPDIVKNFILKTLRLQSWEKKIDRFHLAEGVMPASFKVYHDPVRNHETLIADF GESAIGRVAPVDSGFWWIILLRAYTKSTGDSSLAERPECQKGMRLILSLCLSEGFDTFPTLLCADGCCMIDRRMGVYGYP IEIQALFFMALRCALQLLKPDAEGKEFMERIVKRLHALSYHMRSYFWLDLKQLNDVYRFKTEEYSHTAVNKFNVIPDSLP DWVFDFMPHHGGYFVGNVSPARMDFRWFCLGNCIAILSSLATPEQSVAIMDLIESRWEELIGDMPVKVCYPAIESHEWRI VTGCDPKNTRWSYHNGGSWPGTSILSYHS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 420 | 420 | 3.9E-274 | – | |
| PANTHER | 1 | 420 | 420 | 3.9E-274 | ||
| SUPERFAMILY | 57 | 423 | 367 | 6.38E-45 | ||
| Pfam | 57 | 420 | 364 | 4.7E-178 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Catalytic activity | Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic. | ||
| Molecular function | Glycopeptide alpha-N-acetylgalactosaminidase activity | Catalysis of the reaction: D-galactosyl-3-(N-acetyl-alpha-D-galactosaminyl)-L-serine + H2O = D-galactosyl-3-N-acetyl-alpha-D-galactosamine + L-serine in mucin-type glycoproteins. |
Expression pattern of LotjaGi1g1v0560500.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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