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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0564900 |
| Transcript ID | LotjaGi1g1v0564900.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | BZIP transcription factor; TAIR: AT1G75390.1 basic leucine-zipper 44; Swiss-Prot: sp|C0Z2L5|BZP44_ARATH bZIP transcription factor 44; TrEMBL-Plants: tr|Q0GPF8|Q0GPF8_SOYBN BZIP transcription factor; Found in the gene: LotjaGi1g1v0564900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:109826870..109828606) extracted from Lotus japonicus Gifu genome v1.2.
CCTTCTTCAACTTTTATAAAATAAAACTCCATTTTTTTTATAAGACATATAGGAAAAAATCTGATCGAGTCCGAAACATC TACATGAGCTAACTCTTTCAAAAAGTATTTTTTCTTACACACAAGACTTGAACCCGAAACATTGTTAAAGAAGAATAAAG TATATACCCTTGTCTTTAATTCCTTTCAAAGATAAAAAAATAAAAAACCAGAGACTCCTTTTCCTTTATTTTTCTAAGTC CATTATTATTTTTCTCTGTTTATCTTTTTGAATTTCAACATCACACTTATTTTTTCATCAACTTGTTAGCCTTTTTGGTT CTATAAATTCACTGCTTCAACATACACATCCTTCCCCTTCCCCCATTTCCTTCTCCTTCTCCTTTCTTTCTTTCAAGATA TTTGGTTCATCGGAGCTCTGCCTCTGCACCAAACTTTTCTTGATTCCTTCACACTCTTCGGTGAATCTCCTTTGGTTCTT GTTTTCAGCACCAAAGTTTGAATCCTTTTCACGCTAGGGTGACTCTGTCGGAACAACAAGTCACCATTTTTTCCATTGGA CAAGTGATAATTATCAGAAAGTTCATTTTAAATGTCCGACAAATTTTTATTAATGTTTGAGATTCATGTATCAAATTCTC AGTGAAATCTTCTTTTCTGGGTGTATGATCAATTCCACTGTTAGGCGCAGGACCCATTTAGTTCAATCATTCTCAGTTGT CTTCCTTTACTGGCTCTACTATGTCTCATGATTCCTGTTTCCCCTGTTTTTTCTGATCATAGTTAAGGCTTTGTTTTTTT TTCCTCTTATTTTCTGCAATTCTTTTTTCTGTTTTGTGTCTGGGTCCTGCGATTAAGTATTAGCTTTTGATTTTGAGTCG TATTGTAAGTTTATCTATGGCTTCTTCAAGCGGAACATCTTCAGGGTCTTCGATGATTCAGAACTCTGGTTCAGAGGAGG AGTTGCAGGCGCTGATGGATCAGAGGAAGAGGAAGAGAATGATATCAAACCGTGAATCTGCAAGGAGATCTAGAATGAGG AAACAGAAGCACCTTGATGAGCTCGCTGCACAGGTAGCTCAGCTCAGGAGCGAGAATCAACAGATGCTCACATCGCTCAA CCTCACCACACAACGATTCATGATCATTGATGCAGAGAACTCTGTTCTCAGTGCTCAAATGGGTGAACTCAGCCACAGGC TAGAGTCCTTGAATGAGATCATCGACTTTGTGAATGCCACCAATGGTGTTTTTGCTGCAAACTCCTTCGTGGACCCCATC CCCAGTGCTTACTATCTGAACCACCCCATCATGGCTTCTGCAGATATATTGCAGTACTGATATAAAGAAGATCTATTAGG CTTAACTTAATTCATGTGTTTCAGAAACAGAGAAAAAGAGGGTTTTGATGGTTTCTTTTTATGTTTGAGTCTGTTAGACA TTGTCATCAGTACTAGAGTAATCAATCACTGCTAGGTAGTGAGTGTGTGGGGAATAATGATGATTGTGTAATGTGTCATA AAGAGGGTAAAGCTTGTTGGGTGCTGCTTTCTGGAAATGGGGCCTGTATTGTTCTGAAATCAGGCTATTAAGGTTTTTTT TTTGATCAGAGGCTATTAAGGTTGTATGAGTTAAAGCCAATGTTAATGTTGTTGTTCTCCTTTGCTATATTAATGTAATG TAATGATATTTGACCTATTCCTCCTTTTAATGATTTTGTCCTTTTTTCTTACAAAAA
CDS sequence (LotjaGi1g1v0564900.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCTTCTTCAAGCGGAACATCTTCAGGGTCTTCGATGATTCAGAACTCTGGTTCAGAGGAGGAGTTGCAGGCGCTGAT GGATCAGAGGAAGAGGAAGAGAATGATATCAAACCGTGAATCTGCAAGGAGATCTAGAATGAGGAAACAGAAGCACCTTG ATGAGCTCGCTGCACAGGTAGCTCAGCTCAGGAGCGAGAATCAACAGATGCTCACATCGCTCAACCTCACCACACAACGA TTCATGATCATTGATGCAGAGAACTCTGTTCTCAGTGCTCAAATGGGTGAACTCAGCCACAGGCTAGAGTCCTTGAATGA GATCATCGACTTTGTGAATGCCACCAATGGTGTTTTTGCTGCAAACTCCTTCGTGGACCCCATCCCCAGTGCTTACTATC TGAACCACCCCATCATGGCTTCTGCAGATATATTGCAGTACTGA
Protein sequence (LotjaGi1g1v0564900.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MASSSGTSSGSSMIQNSGSEEELQALMDQRKRKRMISNRESARRSRMRKQKHLDELAAQVAQLRSENQQMLTSLNLTTQR FMIIDAENSVLSAQMGELSHRLESLNEIIDFVNATNGVFAANSFVDPIPSAYYLNHPIMASADILQY
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 51 | 51 | - | – | |
| MobiDBLite | 1 | 23 | 23 | - | – | |
| PANTHER | 1 | 147 | 147 | 1.4E-60 | – | |
| PANTHER | 1 | 147 | 147 | 1.4E-60 | – | |
| MobiDBLite | 24 | 51 | 28 | - | – | |
| SMART | 26 | 90 | 65 | 9.1E-18 | ||
| ProSiteProfiles | 28 | 91 | 64 | 10.657 | ||
| Gene3D | 30 | 83 | 54 | 1.3E-13 | – | |
| Pfam | 30 | 75 | 46 | 2.5E-11 | ||
| SUPERFAMILY | 30 | 81 | 52 | 2.13E-12 | – | |
| CDD | 31 | 82 | 52 | 4.71542E-21 | – | |
| ProSitePatterns | 33 | 48 | 16 | - | ||
| Coils | 46 | 73 | 28 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | DNA-binding transcription factor activity | A protein or a member of a complex that interacts selectively and non-covalently with a specific DNA sequence (sometimes referred to as a motif) within the regulatory region of a gene to modulate transcription. Regulatory regions include promoters (proximal and distal) and enhancers. Genes are transcriptional units, and include bacterial operons. | ||
| Biological process | Regulation of transcription, DNA-templated | Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription. |
Expression pattern of LotjaGi1g1v0564900.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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