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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0568600 |
| Transcript ID | LotjaGi1g1v0568600.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Outer envelope pore protein; TAIR: AT1G76405.2 outer envelope pore 21B-like protein; Swiss-Prot: sp|Q9SM57|OEP21_PEA Outer envelope pore protein 21, chloroplastic; TrEMBL-Plants: tr|I3SCF5|I3SCF5_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0568600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:110168339..110171398) extracted from Lotus japonicus Gifu genome v1.2.
CTGCAGCCGGCCCATACCCAATGAAAACGGAAAGTCTTCACCAGAAAAAGAAAAATCTGAAGTAAAAGGAACGTGTCTTA CTCTAGGTAGGGTTTTATACTTTTATGTAATAATTAAAGTGGGAAGTAAGGATAATTGAGGAGTATCCAAGCTTCTTACG AGTAAGAAAAATGGAAACATCTCTTCGATATGCCGGAGATTCCAAAGCTCTAAGAATCCATGCCAAGGAGAAACTCCGAA TCGACACCAACACCTTCTTCCAGGTAATCCATTTTCCCATTTCGTTGAAATCGCGTTATCTTGTTCACTTCTCACACTCT CGTGTTTCTCGTTCCAGGTGCAAGGAGAGCTCGATACGAGATATGGACAACCGAATTCTCTTCGTGCCCTAATCAGACAT TTCTACCCAAATGTGAGTGTTAATTTCGTGCTCATTTCGTTCGTTTAATCGATGATGATGATGATGATGTCTCTTGTTGA TAATATTTATCATTCTTTCTTACAATGTTGTAGTTATCTGCAACCCTTGGCGTTGGAATGAGATATGATAAACATGAAAA GTTACGCTACACTGTAGTTGCTAAGAAGACATTTCCTGTCACAATCAATGGACTTGTCAACTTTAAGATTAAGGGAGGCT GTGATGTTGACAAAGAGTTTAAAGAGGTAGCTAGATGGTGCTGTCATTTGTCTTTCGTTTTTGTGGTTGTTGCACATTGT TGTATACTGGTTTGTATAATCTAATGTTGAATTTGTTTTTTTATTTATTTTTGTGCAGAGGAAGTCTAGAGGAGCAGCTG AGTTTTCATGGAGTGTGTTCAATTTTCAGAAGGACCAAGATGTTAGACTTAGAGTCGGCTACGAAATATTTGATCAGGTT TTGGTTGTTTCCTCTCTCATTTTGCAATTTTTGAATATTCTCATCATGCTTACTTTTCCAGTCACATGCCTTTGAATTCA GAACCCTTTTGACCTGAGGAACTCCTTAGGTAACTAACACCTGTGGTGGTATGACATGGCTTCGATCTAACCAATTGTTC TAGATGATCTCAGTTTGTTTTTCTCTCAATTGTGTTCCTTGTCCTAACATGATGGTGTCAGGACTGCTTACGTTTTTAGC TGCTGTTCTTATTGATAGATATTGAGTGTACACATTTGCTTTAGTACCTTGTTTAGATGACAACAGAAATTGGAAAAATT AAAATATGGGTAATGAGAAATTATAGGAAAATGAGAAGAATATTATCTTATAGTCTCTTGTGCAGCAAAGCCTGGCAGAT CACTAGGGACAGAACCAGAATAATTAGGTAAGGGGGGTGAAAATTTAACGTGTCAAATAAAACTAACAATGACTAACTGG AATATGTAGTGTAAGAAAGTTGCTATAGAATTTTTTTTCTCGATTCGGAGCACTTGGTTCTGTCCCTGCAGATCACTAAA TGCTGTGGTGTGCACTGTTCATAAGTTGGACGGAAGTTGGAACTCCTACATGTTTGTTGGGGGGAAATTCTGTAGTTAAA CGTTGCCAAAGATAGTTATGTGAACCATTTTCCCTTGGTGTTCAAACAAAGGGAAATCATTTCTTGCCCTGATTTTCTTG TCTCATTGTCTATATCCATGTAGGCTGTAGCTATTGTTAGTCTGGTCTGTATCTTGCCTCCGCATCATGCATAAAATCAA GTGATTTAAATCTTAATTGAACTGCCCTGAGTATTAATTGTTATGCCCTTACTATGGGGTTATAGATTTTGGCCTGGTAA AAAAGGGTAAGGATATCTATACATGTGTAATACTAGTTTATAACTTTTGGTAAAATCATGTGATGTTTATCCATCACCTG GATTATTTGTGTCAAAGTTTATATAATTAAAACATCTATAAGTTTATAATCATATGTTGTCAGATTCGTATATTTCAAAA TGTCTAAATGACGTTAATCTTGATGTATTTCGATGATGTGTTAAATTATTTTGGATTAATGTAATTTCGATTTAATGGTA GTTTGTAGGAATCATCTGATTACAAGTTATTGAATAGTGTAAGACAACTAAAAATCACCTGGGTGTGAGTCGATCCCTCC CCAGTCCCCACTAAAAAAAGTGTCCACAACAATGCATTCTACCAACAAAAAATATGTTCGACCCAACTTGTGTAGTACTA AACTTGAAGTCACTTAAAAAAAAAAACTTGAAGTCATAGGGGTAATTAATACTGCAATTAATAGAGGCCAGTATTTTTGG AGTGGAAATTGTTTGTTTTGGCCTGGATTGAATTGTGAATTGTGATTGCTGGGCTGTTGCAGTTAAGTTAAAATTAAATA AATTAATGGCGAGTCTTCTATTCAAGTTCCATTAATTTATTATTGGTCCAAGTAAGTGTTGGAAAATTGCTATATTCTGT TCCTCATGTTTCATCTGGGCAGCAAACCAATGCTTTTTTGGGAAAAAAAGTTAGCAGAATCTGTGAATCTGCAGTTGATA TTGTTGTCAAGTATCTTAATGATCTAGTTCAATGTTCCTTACCTCAATTTTTTCATGCTATAGTTTTATTCATGTTGTCT TTTCTTAATGCTGCATGCCTGCATCTTATCTTATAACTCTTGTTTCAGGTTCCTTATCTGCAGATTAGAGAGAACAATTG GACTTTTAATGCAGATTACAAAGGTAGATGGAATGTGAGATATGACTTGTGAGATGAGCATAAAGCTTCGACAAGTTCTG TTCGTCATTTTTCTGTAGACGTGTTCTGACTCTGTTTCCCATCTCAGCATTTAGCCCCAATCAAAAAAAAGGCCCATTCA TAATTTATATATTTGGTTTTGCATTAGGAACTAAAGCGATGTGCAATACAGATTAAACATTGAATTTGCATATGATTTAT TATTTATTTACTATTTGTATTAAAGTTCTTCAAGGGAGATTTGGGATGTCATTGGCTGGTAATGGATTAATTCACATGCA TGGTGAATAAAACTATGTGAAATGCAAATAAAAACTTAAACGCGATATAATAATAATAATTATAATATGTTTCTAATTAT AGTGGTAATCTTGGGTGTCA
CDS sequence (LotjaGi1g1v0568600.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAAACATCTCTTCGATATGCCGGAGATTCCAAAGCTCTAAGAATCCATGCCAAGGAGAAACTCCGAATCGACACCAA CACCTTCTTCCAGGTGCAAGGAGAGCTCGATACGAGATATGGACAACCGAATTCTCTTCGTGCCCTAATCAGACATTTCT ACCCAAATTTATCTGCAACCCTTGGCGTTGGAATGAGATATGATAAACATGAAAAGTTACGCTACACTGTAGTTGCTAAG AAGACATTTCCTGTCACAATCAATGGACTTGTCAACTTTAAGATTAAGGGAGGCTGTGATGTTGACAAAGAGTTTAAAGA GAGGAAGTCTAGAGGAGCAGCTGAGTTTTCATGGAGTGTGTTCAATTTTCAGAAGGACCAAGATGTTAGACTTAGAGTCG GCTACGAAATATTTGATCAGGTTCCTTATCTGCAGATTAGAGAGAACAATTGGACTTTTAATGCAGATTACAAAGGTAGA TGGAATGTGAGATATGACTTGTGA
Protein sequence (LotjaGi1g1v0568600.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
METSLRYAGDSKALRIHAKEKLRIDTNTFFQVQGELDTRYGQPNSLRALIRHFYPNLSATLGVGMRYDKHEKLRYTVVAK KTFPVTINGLVNFKIKGGCDVDKEFKERKSRGAAEFSWSVFNFQKDQDVRLRVGYEIFDQVPYLQIRENNWTFNADYKGR WNVRYDL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 167 | 167 | 1.4E-80 | – | |
| PANTHER | 1 | 167 | 167 | 1.4E-80 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Voltage-gated anion channel activity | Enables the transmembrane transfer of an anion by a voltage-gated channel. An anion is a negatively charged ion. A voltage-gated channel is a channel whose open state is dependent on the voltage across the membrane in which it is embedded. | ||
| Biological process | Regulation of anion transport | Any process that modulates the frequency, rate or extent of the directed movement of anions, atoms or small molecules with a net negative charge into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. |
Expression pattern of LotjaGi1g1v0568600.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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