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LotjaGi1g1v0578300.4

Overview

Field Value
Gene ID LotjaGi1g1v0578300
Transcript ID LotjaGi1g1v0578300.4
Related isoforms 3
Lotus japonicus genome version Gifu v1.2
Description Aldo-keto reductase, putative; TAIR: AT2G37790.1 NAD(P)-linked oxidoreductase superfamily protein; Swiss-Prot: sp|Q84TF0|AKRCA_ARATH Aldo-keto reductase family 4 member C10; TrEMBL-Plants: tr|A0A0B2P8Q6|A0A0B2P8Q6_GLYSO Aldo-keto reductase family 4 member C9; Found in the gene: LotjaGi1g1v0578300
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr1:111802006..111803681) extracted from Lotus japonicus Gifu genome v1.2.

ATACAGGAGAACATGGACAAAGAAATTCTGCATTTTGATCTGAATACTGGTGTAAAGATACCATCAGTTGGTCTTGGAAC ATGGAAGGCTCCTCCAGGTGTTGTGGGTGATGCTGTTGTTGTTGCAGTCAAGGTGTTTGTGTTTTTGTCTCTATATTTCT TTGTTCCTCCTGTGTTTAATGTGCTAAATTTTTTCTTTGATTAACATTATCCAAATTCATAGTGCAGGCTGGCTACAGGC ATATAGATTGTGCGCGGGTATATGATAATGAAAAAGAGGTCATTGTTTTCTCCTAATGGTTAATTTAATATTCTGGGTTG TTCAAGAAAAAATTGTTTTTTTTTTTGTTTTGCCTTGGTTTATACTAGGTAGTTTGGATTTGATGCAGGTAGGGGAGGCG CTGAAAACACTGTTTTCTTCTGGGGTAGTGCAGCGTAGTGAAATGTTCATCACATCAAAGCTATGGTATGTGCTGGGACT AATTCTGATCCTCCATTCCAGTTGACCTCGCTTTATCTGAATTAAGCTTTTAATGTGCTTTGAGGGATTAGACTTGAGAT CACATAGTATGGATTTCATTCATTTTTTATTTTAGTGAAAGTATTGAAATCCAAGAAAGAATGAAAAATAAACCTAAAAT TCCATTTTGGTATTGTACATTGCTGTCAGCAGTAATGAACTCCCTCAGGTTTCTTGAAATTTTTATGCATACAGGATCAG TGATTGTGCACCTGAAGATGTCTCAAAGGCACTGGCAAGGACGCTAGAGGACTTGCAGCTTGACTACATTGATTTATATC TTGTATGTTTCTTGATTTCAATGTTGCCTGTAAAATTGATGCAGAAACTGGAGATGCTGTTATGAATTTTGATAGTAAAT TTTGTCACAGATGCATTGGCCTTTTAGGACAAAGCCAGGATCCCGAGGTTGGGGCCCTGAGGTCATGGCTCCCTTATGTC TTCCAGAGACATGGAATGCAATGGAAGGTTTATTTGCCTCCGGTCAGGCACGTGCGATTGGCGTAAGCAACTTTTCAACT AAGAAGCTGCAAGACCTGCTCAGATATGCTAAGATTCCACCAGCAGTTAACCAAGTTGAATGTCACCCAGTTTGGCAGCA GCCTGCTCTTCATAATCTGTGCAAGTCTACTGGTGTTCATCTCACAGTATTGCTCTTACTAATCTAAATTATGTCTTCCT TTTTCTGTAGTGTGTATTTGAGATTTTGTGGCTTGCATTTAGTTAACAACATTGCATTCTTACAGGCATATTCTCCTCTG GGCTCTCCAGGGTCATGGGTAAAGGGGGAAATCTTGAAGGAACCAGTGTTGATTGAAATTGCTGAAAAACTTAATAAGTC TCCAGCACAAGTGGCTTTGCGCTGGGGACTCCAAAGTGGCCACAGTGTTCTTCCAAAAAGTGTAAATGAATCTAGGATCA AGGAAAACCTTAGTTTATTTGATTGGTGCATCCCACCAGAGCTCTTCTCAAAGCTCTCACAGATTCACCAGGTTTGATCA GTGCCTTAAAATAAGTACATATCTAATATGATAGTTTATTGATTTTAATTTCTTTTTTGCATCATACAGCAAAGGTTACT TCGAGGGGACTTCGCAATCCATGAAAGTTGTAGTCCATACAAAAGTCTTGAAGAATTGTGGGATGGAGAAATATGA
Download Genomic Sequence

CDS sequence (LotjaGi1g1v0578300.4) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGACAAAGAAATTCTGCATTTTGATCTGAATACTGGTGTAAAGATACCATCAGTTGGTCTTGGAACATGGAAGGCTCC TCCAGGTGTTGTGGGTGATGCTGTTGTTGTTGCAGTCAAGGCTGGCTACAGGCATATAGATTGTGCGCGGGTATATGATA ATGAAAAAGAGGTAGGGGAGGCGCTGAAAACACTGTTTTCTTCTGGGGTAGTGCAGCGTAGTGAAATGTTCATCACATCA AAGCTATGGATCAGTGATTGTGCACCTGAAGATGTCTCAAAGGCACTGGCAAGGACGCTAGAGGACTTGCAGCTTGACTA CATTGATTTATATCTTATGCATTGGCCTTTTAGGACAAAGCCAGGATCCCGAGGTTGGGGCCCTGAGGTCATGGCTCCCT TATGTCTTCCAGAGACATGGAATGCAATGGAAGGTTTATTTGCCTCCGGTCAGGCACGTGCGATTGGCGTAAGCAACTTT TCAACTAAGAAGCTGCAAGACCTGCTCAGATATGCTAAGATTCCACCAGCAGTTAACCAAGTTGAATGTCACCCAGTTTG GCAGCAGCCTGCTCTTCATAATCTGTGCAAGTCTACTGGTGTTCATCTCACATTAACAACATTGCATTCTTACAGGCATA TTCTCCTCTGGGCTCTCCAGGGTCATGGGTAA
Download CDS Sequence

Protein sequence (LotjaGi1g1v0578300.4) extracted from Lotus japonicus Gifu v1.2 Proteins.

MDKEILHFDLNTGVKIPSVGLGTWKAPPGVVGDAVVVAVKAGYRHIDCARVYDNEKEVGEALKTLFSSGVVQRSEMFITS KLWISDCAPEDVSKALARTLEDLQLDYIDLYLMHWPFRTKPGSRGWGPEVMAPLCLPETWNAMEGLFASGQARAIGVSNF STKKLQDLLRYAKIPPAVNQVECHPVWQQPALHNLCKSTGVHLTLTTLHSYRHILLWALQGHG
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
Gene3D
G3DSA:3.20.20.100
5 210 206 2.9E-87
IPR036812
PANTHER
PTHR11732:SF439
7 204 198 3.6E-100 –
PANTHER
PTHR11732
7 204 198 3.6E-100
IPR020471
SUPERFAMILY
SSF51430
8 204 197 3.27E-64
IPR036812
CDD
cd06660
11 204 194 5.02237E-58
IPR023210
Pfam
PF00248
20 203 184 4.7E-36
IPR023210
PRINTS
PR00069
38 62 25 4.0E-40
IPR020471
ProSitePatterns
PS00798
42 59 18 -
IPR018170
PRINTS
PR00069
98 116 19 4.0E-40
IPR020471
ProSitePatterns
PS00062
143 160 18 -
IPR018170
PRINTS
PR00069
143 160 18 4.0E-40
IPR020471
PRINTS
PR00069
177 206 30 4.0E-40
IPR020471

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0016491
Molecular function Oxidoreductase activity Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
Subterm of
GO:0055114
Biological process Oxidation-reduction process A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi1g1v0578300.4, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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