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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0597000 |
| Transcript ID | LotjaGi1g1v0597000.3 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Phosphatidylinositol 4-phosphate 5-kinase 1; TAIR: AT4G17080.1 Histone H3 K4-specific methyltransferase SET7/9 family protein; Swiss-Prot: sp|Q56YP2|PI5K1_ARATH Phosphatidylinositol 4-phosphate 5-kinase 1; TrEMBL-Plants: tr|A0A1J7H4T3|A0A1J7H4T3_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0597000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:113680394..113681523) extracted from Lotus japonicus Gifu genome v1.2.
CTTAACTTTATTAGGAATGGAGACACATATGCGGGGGAATACTTTGCGGACAAGATGCATGGGTTTGGGGTATATCGTTT TGCAAATGGTCATCGATATGAAGGAGCCTGGCATGAGGGCAGAAGGCAAGGACTTGGAATGTATACATTTAGAAATGGTG AAACCCAATCTGGTCACTGGCAAAGTGGAGTCCTTGACATTCCAAGCACCCAGAACACGACCTATCCAGTTTCTCCTGTC GGTGTCAATCATTCTAAAGTACTCAATGCGGTGCAGGTACATTCTTTATGTTTATGATTTATTTCCCTTTTAGGTTTTTT TAACTATTCTTCCCCAAACTATATAAAGGGCAACATGGAGCTGTAAAGCTCTTGCTAGAACAGGGTTAAGGGAAGGGTCG AACCCATTTGTATTTATTTTAGGTAGCTTTACCTTGCATTTACTAGAGTCTGATTCCACAATTTAAATGTATTACCTCCT AATCACACACATGGCAGCACTCCAACTGCCCTTCGTTTTTTTCCGTTATAAATAAAGAAACATGGATAATGGTGAATATT TTCTCTTCTTTTTCTAGTGTCCTAAATGTATCAGTGTGGAATCTGGATGAATCTGTCTTTACTGGTGACTGAATTTGTTA TTCCAATAATAGGATGATGTCCCAATATTTTCTCTGTATGACTTTGTTTTGGTGGTATTCTTATTTATTATAGCATCTCA TTTAATTGGGCTATTGGAAATTCAGGTTTTGGTTATTCCTTGTGCTTTATTCTAAATCTTTTGATAGTAAAGCTGAGGAT ACATGCATATATTTGGGCATCCTGTCCTGTATGCATAATATTAGCACAACCTTGTAAGCGGAAAGACAAAACTAACCGTA GACAGATAATTTATGACATTATGAGCTTTCAATTTCCCACAACTAAATTTGCATTTATTTGCTAAACAAATAGGAAGCAA GACGAGCAGCAGAGAAAGCCTATGATGTGGCCAAGGTAGATGAAAGGGTAAACAAGGCAGTAGCAGCTGCTAATAGAGCA GCCAATGCAGCTAGAGTAGCTGCTGTCAAGGCTGTGCAAAAACAAATGCATCATGTCAACAATGAAAGCTTCCCAATTCC TGTTATGTAA
CDS sequence (LotjaGi1g1v0597000.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCATGGGTTTGGGGTATATCGTTTTGCAAATGGTCATCGATATGAAGGAGCCTGGCATGAGGGCAGAAGGCAAGGACT TGGAATGTATACATTTAGAAATGGTGAAACCCAATCTGGTCACTGGCAAAGTGGAGTCCTTGACATTCCAAGCACCCAGA ACACGACCTATCCAGTTTCTCCTGTCGGTGTCAATCATTCTAAAGTACTCAATGCGGAAGCAAGACGAGCAGCAGAGAAA GCCTATGATGTGGCCAAGGTAGATGAAAGGGTAAACAAGGCAGTAGCAGCTGCTAATAGAGCAGCCAATGCAGCTAGAGT AGCTGCTGTCAAGGCTGTGCAAAAACAAATGCATCATGTCAACAATGAAAGCTTCCCAATTCCTGTTATGTAA
Protein sequence (LotjaGi1g1v0597000.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MHGFGVYRFANGHRYEGAWHEGRRQGLGMYTFRNGETQSGHWQSGVLDIPSTQNTTYPVSPVGVNHSKVLNAEARRAAEK AYDVAKVDERVNKAVAAANRAANAARVAAVKAVQKQMHHVNNESFPIPVM
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 1 | 101 | 101 | 1.0E-7 | – | |
| PANTHER | 1 | 129 | 129 | 1.8E-73 | – | |
| PANTHER | 1 | 129 | 129 | 1.8E-73 | – | |
| SUPERFAMILY | 1 | 48 | 48 | 5.62E-13 | – | |
| Pfam | 1 | 14 | 14 | 0.0049 | ||
| SMART | 13 | 34 | 22 | 1.9E-4 | ||
| Pfam | 15 | 36 | 22 | 3.0E-6 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi1g1v0597000.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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