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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0614600 |
| Transcript ID | LotjaGi1g1v0614600.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Methyltransferase, putative; TAIR: AT3G01660.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; Swiss-Prot: sp|C5BMZ8|BIOHC_TERTT Biotin biosynthesis bifunctional protein BioHC; TrEMBL-Plants: tr|I3S6K6|I3S6K6_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0614600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:116029457..116031411) extracted from Lotus japonicus Gifu genome v1.2.
TTTTTTTCTACACACAACTTCCCATAATTTTTTTTCTATGAACACTTCCCATCCTTTACAAAAAAATAAAAAATAGTAAA TGCGTTCTGGATTTTAATTTTCGAAACACAACTTAAATAGTGGCATTCTAGGAAATTTCTAGGTGAGTGAGTGTTAAGAA TTGTGGTCTGGGTGGGTATTTATCAACCATCCATTAGTTATCCACAATTGTAATATTAGTTGCATACAAAATTTACTTGA ACGAAAAGAAAAAGTTGTAAGCAATTAGAGTTTGGTATTGATATTTTCTGATTCATGTCCAATTTTCACCCAAACATGCA AGCCAATCTACACCCCATCTCTGCATCTCATGTCAAGCCTTCAATCAAAATTGTTAGCACTTTAAATGAAAACTACCAAA CCAATCCCCAATCCTCAGTAGGCAAAATCAAACGCCTTGTTCTCACACAAGAAGGCAGAACCAAACTGAATACTTACTCA GACAGAGATTTTTATGCATACCCACGCTTGGTTACTCACGTTGATGATGGCTTCATTTCTACACTTACCAATGTTTATAG AGAAAGGCTGAGACCTGACACAGAGATACTTGATCTCATGAGCTCATGGATTAGCCATCTACCCAATGATGTCAAGTACA AAAGAGTTGTGGGGCATGGGTTGAATGCACAAGAGCTTGCAAAGAATCCAAGACTGGATTACTTTTTTATAAAGGATCTG AACAAGGATCAGCAACTTGAACTTGAGAGTTGCAGTTTTGATGCAGTGGTATGTACAGTTAGTGTGCAGTATCTCCAACA ACCAGAGAAGGTAAGATATTCCACGATTTTATATTATTTCCCATACCTCTTATTACCTCAACTTATTCTCAGTTCAAGAA ATTTGGCTATATGAACTGATAGAGTCCACACTGATACTTTGGTAGTATAGTAAAAAGCTATTAAATTTGTTTTGGGTCTA ACACTACCCCAAAATCTGATTTTAGGATATAGCTAGGTCTAACCAAGTTTTAAAATGGTATCAAACTCTATCGTAGGTTC ATTGTTGGGCCACCCATTGGCCTGATTCATCTGGTATTTCCCATGATGAAGATAAGAGCATGACATGATTGCTCGGTCTA AACCTGTAATGGGAATATGGGCGCTCCGACGATGAACTTCAAGGTCAACATGTCCGGTCCGGGATGTATCTAATTTTAAT TCATATATGTCCAAAGGTATGGCTAATGAAGTAGTTATAAATGAAGACAATCCTCACATCCAAGCTCATTTTTTAAGTAG AGTTGGAATTAGACCAAATTTGGAGAAAAAACTGACACTTTCAAATGTAAATGTATTTTGAAACTTTTACAAGAACTTAT TGAAGAATTGAGTTGATTAATGTTAATGAAACATCACTACTCACAGGTGTTTGCAGAGGTGTTCAGAGTGCTAAAGCCAG GAGGGGTGTTCATTGTGAGTTTTAGCAACAGAATGTTTTATGAGAAAGCCATAAGTTCATGGAGGGAAGGTACTGCTTAT AGCAGGGTTCAACTTGTGGTTCAGTACTTCCAATCTGTGGAAGGTTTCACAGAGGCAGAGGTAGTTCGAAAGCTACCAAC TACTAAAGGTGCTCAAGAGAACAAGTCACCATTGGGTTGGATTATGGGGCTTTTTGGATTGCTGTCAGGATCAGATCCCT TTTATGCAGTGATTGCTTACAGGAATTTCAAACCCATACAAGATGATTGAGTTAGAGGATTGTTGTGAATGTTGAAAATG TGCTAAGTTACTGGTTAAGTTTAAATTGTGTTCAGACTTCGTTACTTTCTAAAGCAAATTGGATATAGAAACGAACATTT GGTTTATATGCTGCAAGTAAATAACATTATGGCATCGAGGCGAACCAATGATATTTTAACACTAGTTCTAATAAATTATG CATCGTTTAGTGTATTGTTTATCTTTTATTTCGCA
CDS sequence (LotjaGi1g1v0614600.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTCCAATTTTCACCCAAACATGCAAGCCAATCTACACCCCATCTCTGCATCTCATGTCAAGCCTTCAATCAAAATTGT TAGCACTTTAAATGAAAACTACCAAACCAATCCCCAATCCTCAGTAGGCAAAATCAAACGCCTTGTTCTCACACAAGAAG GCAGAACCAAACTGAATACTTACTCAGACAGAGATTTTTATGCATACCCACGCTTGGTTACTCACGTTGATGATGGCTTC ATTTCTACACTTACCAATGTTTATAGAGAAAGGCTGAGACCTGACACAGAGATACTTGATCTCATGAGCTCATGGATTAG CCATCTACCCAATGATGTCAAGTACAAAAGAGTTGTGGGGCATGGGTTGAATGCACAAGAGCTTGCAAAGAATCCAAGAC TGGATTACTTTTTTATAAAGGATCTGAACAAGGATCAGCAACTTGAACTTGAGAGTTGCAGTTTTGATGCAGTGGTATGT ACAGTTAGTGTGCAGTATCTCCAACAACCAGAGAAGGTGTTTGCAGAGGTGTTCAGAGTGCTAAAGCCAGGAGGGGTGTT CATTGTGAGTTTTAGCAACAGAATGTTTTATGAGAAAGCCATAAGTTCATGGAGGGAAGGTACTGCTTATAGCAGGGTTC AACTTGTGGTTCAGTACTTCCAATCTGTGGAAGGTTTCACAGAGGCAGAGGTAGTTCGAAAGCTACCAACTACTAAAGGT GCTCAAGAGAACAAGTCACCATTGGGTTGGATTATGGGGCTTTTTGGATTGCTGTCAGGATCAGATCCCTTTTATGCAGT GATTGCTTACAGGAATTTCAAACCCATACAAGATGATTGA
Protein sequence (LotjaGi1g1v0614600.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSNFHPNMQANLHPISASHVKPSIKIVSTLNENYQTNPQSSVGKIKRLVLTQEGRTKLNTYSDRDFYAYPRLVTHVDDGF ISTLTNVYRERLRPDTEILDLMSSWISHLPNDVKYKRVVGHGLNAQELAKNPRLDYFFIKDLNKDQQLELESCSFDAVVC TVSVQYLQQPEKVFAEVFRVLKPGGVFIVSFSNRMFYEKAISSWREGTAYSRVQLVVQYFQSVEGFTEAEVVRKLPTTKG AQENKSPLGWIMGLFGLLSGSDPFYAVIAYRNFKPIQDD
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 31 | 278 | 248 | 4.9E-120 | – | |
| PANTHER | 31 | 278 | 248 | 4.9E-120 | – | |
| SUPERFAMILY | 65 | 207 | 143 | 1.6E-15 | ||
| CDD | 116 | 191 | 76 | 1.74982E-6 | – | |
| Gene3D | 122 | 248 | 127 | 3.4E-17 | – | |
| Pfam | 145 | 189 | 45 | 7.0E-11 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Methyltransferase activity | Catalysis of the transfer of a methyl group to an acceptor molecule. |
Expression pattern of LotjaGi1g1v0614600.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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