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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0616000 |
| Transcript ID | LotjaGi1g1v0616000.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | CONSTANS-like zinc finger protein; TAIR: AT5G14370.1 CCT motif family protein; Swiss-Prot: sp|Q9LU68|CIA2_ARATH Protein CHLOROPLAST IMPORT APPARATUS 2; TrEMBL-Plants: tr|V7B8P5|V7B8P5_PHAVU Uncharacterized protein; Found in the gene: LotjaGi1g1v0616000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:116283992..116289586) extracted from Lotus japonicus Gifu genome v1.2.
TTTCTAATGATGAGATGTTAAAAAAAAAATTATGCATATGCCTTCATGATCATATCTACACATTATAAAGTCTATATCAA ATGAGATGTTATAACCCTAAAATTAATGCATAGTATATCACTCTTACAAGGGACAATTTTTAAAACATACTTAACATTAA TACATGATGAATTATATATGTGAGTACATATATTATAAAAATATCCAACAGTATTTATATATGTAACTCCATACTCATAC TATATCAAGGCATTTTAGAGCGAACTAATGGTAAAACCCATTTATCAAGACAATGGAGTAATCTGGAATTCTCGATTGCC ACTGAGGGAGAGGCCAAAACTTTTTAACCCAATCTATCACCTCATCTCTTCCCATAAAACGAAATCCAGATAACATTACA ATCCACACTCATAACCAATCACACCACCACACGTATCATGCAGACAATACATCACATCACATCACCCCCTCATGACTCAA GACTGTCCCTCCCCCAAAACTCTCCACCTTTTCCCTCACTATTCTCATCTCACTCCCTCCCTCCCTCTGTTCCCTTCTTC CTCCCTTGAATGAGTGAGAAAAAAACAAGTGTGTTGAGTTAGTGCTAGCTACCTTTGGTTTGTGTAATTGTGTTGTATGA AGTAGTGTGCATTCATTCATAAGACAACAACAGAATAGGAATCCATATGTGCAACAAGAATAGTCCAACTCAAACTTCAG AAGCTACACAAACAACAAACTCAATTATGAAGAAGAAAACCCAAAAACAACACATCAAAAAAGAGTTATTATCTTCTTCT TCATCTTCTTCATCTTCTTCTCTGAAACCGCACCGACGCAGAAACAGAACCAAAACCCGAAAGCCCAAGTACTTAAGCCT CCGTCTCCAACTCTCTCAATCCCAACAACCCGAACCCGAATCCGAAAGCCTGACCCACCAACAGAAAACCCACAATCTGA ACAACAACCTCTTCACCGACGACAGGGACATTATGCACGAGGAGAACAACGTGGCGCTGCTGTTCACCTCCGACGGCGGC GCCACACTCACCGGGCTCCTCGAGGACGAGTCGACAACGACGGCGGAGGGATCGATGTCGCCGTCGGTTTCGGCGATGAC GTGTCCGCCCGCGATGGAGGGGTTGGTGAGGAAGGCGATGAGGAAGGGGCGGGGGAGCGGCGACGGGGAGGAGGAGAGGT GGGTGTGTTACTCGGAGGTGGTGGAGGAGATCAAGAAGGAGATGATGACGACGACGACGGAGGAGGTGACGAGTTACTGC GGCGGTGGTGATACGACGGCGACGGCGGCGTTTGGGTCGTTGTCGTTGAAGCTGGATCACGAGGGGATATTGAATGCTTG GTCTGATAAAGGGCCTCTTTACATTGGTGATGAGGCCCCACAGGTTGTCCCTGATTTATTCAATGCTGGCGGTTTTCTCC ATACTGCATTTCCTCCCAATGTAACTCTCATCTCACTCTTATTCTGGATTTTAGTTCTTTTTTAGCAATTGATTGAAAAA TATAATCAATTTGTCAAGATTAGATTTAATCATTAATTTAATCAGTTGCTAATTGCTATAGTTAAAAGGGGTTGAATAAT GAATCTGATTAGTTTAATATTTTGTTTGTTGTAATTTGATTACGTCATGTATTTGTTTATTAGATTTTGTTGGGGATCTT GAAAGAGAGTTTATTGTTTGTTTAATTGTGTTTTTGGACTGTGCCAATGTTGAGTGCTATAGTGCATAATTTCATTTTGA TGTAGTTTTTTTTTTTTTTTTTTTTTTTAATTCTAGAGATGTTCTGGTAATTAACTTTGATTTGGATCCGGTTTTCCTTG TGCTTGATTTGGGGCCTTTGCCCTGAGGTAGATGACTGAGTATGATGTTGGGCATCAGGATCTTCTCATGTGGAATTTCT CGGGTGTTTCGTCATGTTGAAATTTTGTATTGATTTCGCCTGTACTTGTTTAATCCATACACGTGAAGAGAGAGGAAGAC ACAATTTCTAGAGAAATTTCACATATGATTCTAATTCATGACCCTAGCTAGTTTGAGGGGTTGGACATTGTTGAGATTTA TGTTATTAATTATTATTACTAATAATGAAAGTAGTAATGGAGCATCAGAAAGGTAGAGGCAGGGCAGTGGATGATCTGAA ATTGGTTGATTTAAATGGATTTGAATGAGATTAGAGAAATTCTTTTAGGTAGGTAGGTAGGGGTTGGAGCTGTGCAACAA GTTGTGAAATTAATGTATCATGACATAAACTTTTTCCCTCCATGTAGTGATTTTTTATGATGAAGTCAATTAATTGCTTG CTTTTTGGGCATACATGCAGGTTGCATCATGGGACAGTTGGGGGGTTGATGTTGTTGGGAACACATGGACAGTTCCTGAA GATAACAAGACGAAAGTGAAGCAAGAAATGGATTGGAAGGTGGGGCAGAGAGAGGCTAGTGTGCAGAGATACAAGGAGAA GAGGCAAAACAGGCTCTTCGCTAAGAAGATCCGTTATGAAGTTCGCAAGCTCAATGCTGAGAAACGGCCCCGGATGAAGG TACTATACTATTCTAAACCTCTAATGTTGCTATTGTGGAACATTGTTTGATATAAAAACTTGAAAGCAAAGTAAATATAT GGTTAATCACTAAATCCATTTTGGCCTTGGATAAGGCGTTATCAAAATAATGCACCTTTCTATGAGATAATTTAATTGTT AAGTTTCATCATGTTTTTCCATTCATTCTATTTCCTTAAAAAAAAAATTGGTTTCCCTCTTGGAATGAAAATGAAAGAAA TCTTTAAATATCAAAAGTCATTAAAATTGAAAGACATTCTACATTCAAGAACTTGCCTTGCGTAGTATAATTAGCTTATT CTATAAAGGCAATAAAGCCATTTATTCTAGCTTTCCCATCAATGTACTACTGCATCAAAACTAGCTAGTTGCCATTAAAA GAAAAACGGCATATGTATCAAATGCTAACTTTCTCTAAGACTAGATCGTGGGTTTAGGTGGGAAAGGGGACAAGGGAAGG GTTTTAAAAGACTTGAGCCTGTTTGTATTTTTTGCAAAACTGGGAAATTGCTCGTTCAGAGGCATATTAAGGAAAATGAG GCATGAGGTTACTTCTTAGTTTTTGCCTCAGAATGAGTTTTTTTTTTTCTTTCTTTTTACTTAAAAGACATATAGGCACT TTCGTGCACCTTTGATTTTATAGTTTCACATATGCCTGATTTTAGTCTCAATAGTTTTAATTGCTCCAATGAAGTCCAAT ACTTTGAAATTGAATAAATGTGGGTTATGTTAACCTATCTTCTAATAGTTAACGGAAAAAGGGTATCATAACTTTTAATG TAGATGGCAAGTTAAAACCACTGTCACTTGCCACCGTTGAGAAGCCTCACTTTGACTAGATATATGGTTAACATAGTCTT ATGAAGGGTAGAGCAACCCTTACCCCGAGTTAGATTTGGGGTAAAGTTAAGCCTAATCTGATTACTGGAGATAATACATA TATGGGCAAATTCCATGCTGCAGATGGGGGTGCATTGAGAAATACCAAATTAACAAAAGGGATGACCAAAATTGTCCTTA TAAAGGATAGAGAAACCCTCGAGCTAGTTTTTGGGGTAGAGTTAGGTCTAACTCAAATTCTAAGAGCTGTGTCATAAATT GTAATCTACGTCAGTTTCTTTCATTAGTTAGGACCAAATTTGTCCATTTTGATGGTAGACTTAGGGTGCTTTTGAGAAAA CAACTTAATTAAGTGTTTATGACAATAAGCGTTTATCCATAAGCTCTTAAGTTAATTTGATAAACTTATTGAAATAAGTT GAAAACATGTTATAGCGCTCAAGAATAGAATCATTTGCTACATTTGGTTATAGAAATTACCTAAGTTGTCAATCCCGGCG GTAACCTGGTTTCCCATCCCATTCTAGCCATGTCCTGGGATGAATTTTCCCGTCCCAACCCAGTTCACTGTCCTGGCCTT CTCGGATGGGATCCCGGCCAAAATCTCAGTGGGATAACAGTTTTCCAAAAATGCCCACAAATGTATTTTTAGGGGTATTT CCGGGTTTTCAGAACGGAAAAACCCCTAGAACTTTGATTTTGTTTTATCTTTCCCTCTCTTCTACCCACTTCGAACCTCT TCTCCTCTGTTCTATCTTCGTACCTTTCTCTTCAACCCTGAACCGGCTAGTGACTACCATGACAGGACTTCCAACCTTTC TCCGGCGAGCGTCACCTCTGTTCTACACACTTCGACCCTCTTCTCCTTTGTTCTATCTTGTATCTATCATTGATTTAGTA TGTATATATATGGTATGGGTTATACAAAATATAGACAAAAATTCACTATCCCGGCCATCCCACATTCTAGGATCCAGCTA TCACAATTTTGAGGCTGGCCGCAACGACCTGAAAAATATTGAGTGCTATACTTGCTTGCCAAAAAAATTAGTCTTCAAAA TCTTTAATTTGTGGTCATTCCTTCCTGCTATAGACATGCTAAATAATTTGTAATAGAGTACTTGTTCTGGAGCTGTTTTG AACTGTATTTTTTTTTTTATACGTTTTGCAGGGACGATTTGTGAAGAGGGAATGAGAAGTGTAGACTGTAATAGGCCACC GTTCCTAGTAATAAGAGTTAATGTTGTCAATATTACAGCGTTGAAATAGATTTTTTCTTGCCTTCTGTATTTTTGTAAAG ATGGTGGGTGGTTCTTGATAAAAATCCCAGTGGTACTAGGATTCAGTCCTGGGAAAGTAGTTTATGTTCAACTGCTGTTT TGGGGGGTCCTCTATACTCTCGGGTAAGTGCATATTTGAAAATCCTTTTGTAATTGATTCTAAAGTTAGAATCAATTCTG TGGAGAAGCTACGCTTTTGTAAGTAGCTTCTGTGTTTCAGAATTGATTTTAAGGAAAAAAGAAGTTGATCCAAACATGTT ATGAAATTGCCGCTTGTCAATGTTTGACACATGTTTGATCTCAATCCAAGGTTTTAGAAACAGTGGAATATGCTGTACAA GTACTGCCATATGTATAAGTTTTTCTCTTGCAATATCTAGCAAATTGATAAAATGTTTTGGGAATTAAACATTGGCCAAG AAATCAAATCTGGGAAACTCTTGAAGGAAGTGTTGTGTTGCGTGACTACAGCCCCCGTTGCTATATCTTAAATGAAAATG AATCCTTCCATTGGAATCAAAGTTAATGTTCAATCAATTTTATATAAGTTGACATCTGGAATATATTTGGTCAAGAAAAT GGGAGCAGAAGGGAAGCAATGTGCTACTATACTTATGTTACCCGATTAATTTGTTGATTTTTACTGCTGTTTTTTGAAAA AGAAAATAATATTCTTGTAGTTATTGTTAGGACTTAGGAATGCCAATAAGGTCAAGACACACATAAAAGTTACTCAATTA GATGATCGTTGGATAATAAGGTGGAAAATAACAGTTAGCCCAAAATCATTAGGGATAGAAACATCTTTTTTTAGCTTTTA TCGTAGTCTATTGTGAATTTGACTTTAGTGTGATTTTGCACTGTACATCTGAGCATGGGGTTATTTATGTATTCG
CDS sequence (LotjaGi1g1v0616000.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTGCAACAAGAATAGTCCAACTCAAACTTCAGAAGCTACACAAACAACAAACTCAATTATGAAGAAGAAAACCCAAAA ACAACACATCAAAAAAGAGTTATTATCTTCTTCTTCATCTTCTTCATCTTCTTCTCTGAAACCGCACCGACGCAGAAACA GAACCAAAACCCGAAAGCCCAAGTACTTAAGCCTCCGTCTCCAACTCTCTCAATCCCAACAACCCGAACCCGAATCCGAA AGCCTGACCCACCAACAGAAAACCCACAATCTGAACAACAACCTCTTCACCGACGACAGGGACATTATGCACGAGGAGAA CAACGTGGCGCTGCTGTTCACCTCCGACGGCGGCGCCACACTCACCGGGCTCCTCGAGGACGAGTCGACAACGACGGCGG AGGGATCGATGTCGCCGTCGGTTTCGGCGATGACGTGTCCGCCCGCGATGGAGGGGTTGGTGAGGAAGGCGATGAGGAAG GGGCGGGGGAGCGGCGACGGGGAGGAGGAGAGGTGGGTGTGTTACTCGGAGGTGGTGGAGGAGATCAAGAAGGAGATGAT GACGACGACGACGGAGGAGGTGACGAGTTACTGCGGCGGTGGTGATACGACGGCGACGGCGGCGTTTGGGTCGTTGTCGT TGAAGCTGGATCACGAGGGGATATTGAATGCTTGGTCTGATAAAGGGCCTCTTTACATTGGTGATGAGGCCCCACAGGTT GTCCCTGATTTATTCAATGCTGGCGGTTTTCTCCATACTGCATTTCCTCCCAATGTTGCATCATGGGACAGTTGGGGGGT TGATGTTGTTGGGAACACATGGACAGTTCCTGAAGATAACAAGACGAAAGTGAAGCAAGAAATGGATTGGAAGGTGGGGC AGAGAGAGGCTAGTGTGCAGAGATACAAGGAGAAGAGGCAAAACAGGCTCTTCGCTAAGAAGATCCGTTATGAAGTTCGC AAGCTCAATGCTGAGAAACGGCCCCGGATGAAGGGACGATTTGTGAAGAGGGAATGA
Protein sequence (LotjaGi1g1v0616000.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MCNKNSPTQTSEATQTTNSIMKKKTQKQHIKKELLSSSSSSSSSSLKPHRRRNRTKTRKPKYLSLRLQLSQSQQPEPESE SLTHQQKTHNLNNNLFTDDRDIMHEENNVALLFTSDGGATLTGLLEDESTTTAEGSMSPSVSAMTCPPAMEGLVRKAMRK GRGSGDGEEERWVCYSEVVEEIKKEMMTTTTEEVTSYCGGGDTTATAAFGSLSLKLDHEGILNAWSDKGPLYIGDEAPQV VPDLFNAGGFLHTAFPPNVASWDSWGVDVVGNTWTVPEDNKTKVKQEMDWKVGQREASVQRYKEKRQNRLFAKKIRYEVR KLNAEKRPRMKGRFVKRE
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 23 | 23 | - | – | |
| MobiDBLite | 1 | 89 | 89 | - | – | |
| PANTHER | 24 | 338 | 315 | 2.5E-74 | – | |
| PANTHER | 24 | 338 | 315 | 2.5E-74 | – | |
| MobiDBLite | 32 | 46 | 15 | - | – | |
| MobiDBLite | 47 | 61 | 15 | - | – | |
| MobiDBLite | 64 | 89 | 26 | - | – | |
| Pfam | 295 | 337 | 43 | 9.5E-19 | ||
| ProSiteProfiles | 295 | 337 | 43 | 15.745 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi1g1v0616000.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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