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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0620200 |
| Transcript ID | LotjaGi1g1v0620200.3 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Protein TPLATE-like protein; TAIR: AT3G01780.1 ARM repeat superfamily protein; Swiss-Prot: sp|F4J8D3|TPLAT_ARATH Protein TPLATE; TrEMBL-Plants: tr|A0A1J7HR99|A0A1J7HR99_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0620200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:116758606..116763842) extracted from Lotus japonicus Gifu genome v1.2.
ATGGACATCCTCTTCGCGCAGATCCAGGCGGATCTCCGCTCCAACGACGCGCTCCGCCAATCCAGCGCCCTGCTGCAAGC CCTGCAGCAGTCCGCGGCGGGGCGCGACATCGCCGTCATCGCCAAAACCGCCGTGGAAGAGATCGTTGCAGCACCGGCCT CCACCGTCTGCAAGAAGCTCGCCTTCAACCTCATCCGCTCCACGCGCCTCACCCCCGATCTCTGGGACACCGTCTGCGGC GGCATCCGCAACGACTTCCATTTCCCCGACCCCGACGTCACCGCCGCCGCCGTCTCCATCCTCGCCGCGATCCCGTCCTA CCGCCTTGCCAAGCTCATCGCTGATTGCAACAAGGAGATCTCCGACTGCTTCGACTCCCCCAGCGACACTCTCCGATTCT CCATCACCGAAACCCTCGGCTCCGTTCTTGCTCGCGATGACCTTGTCACGCTCTGCGAGAACAATGTCAACCTTCTCGAC CGCGTCTCCGCCTGGTGGACCCGCATCGGCAACAACATGCTTGACCGTTCCGATATCGTCGCGAAGGTCGCGTTCGATTC CGTCGGGAGGCTCTTCCAGGAGTTCACCACCAATCGGATGAGCAGGCTCGCCGGAGATAAGCTTGTGGACAGCGAGAATT CCCTTGCTATCCGGTCCAATTGGGTTTCCTCCATGGTTGATCTCGTTTGGAGGAAGCGCAGCGCTCTAATGGCGCGATCG TTGGTCTTGCCCGTTGAGAGCTTCCGCGCCACGGTGTTTCCAGTCGTTTACTCCGTTAAGGCCGTCGCCTCCGGTAGCGT CGAGGTGATTCGGAAGCTGTCCAAGGCTTCTGGTAATGCTGCCGGGGGTAATGAGGTTGATTCCAATGCGGAGAAGTTGG TGGGTGTTTCGGATGTGGTTACTCACTTGGCACCCTTCTTGGTTTCGTCGTTGGAACCCGCGTTGATTTATGAGGTGGGG ATTAATATGCTTTATCTGGCTGATGTGCCTGGAGGGAAGCCTGAGTGGGCATCACAATCCATCATTGCCATTCTCACTCT GTGGGATAGGCAGGAATTTACATCTGCTAGAGAGAGTATTGTTAGAGCTGTTGTTACCAATCTTCATCTCCTTGATCTTA ACATGCAGGTGATGCCTCCTTGTGTATTCTATATCAGTTTATTTTTATCAATAGTCTTCACTTGTCAATTGTCATAAACT TTTAAGTTGTGGTACTTTGGCCTGTGAATTATGATTTGTATGAGAATTGCACTACTCTATGCATACATGGTCCTTCCTAA TGATGAAGTGGGTGTGTTTGGGTGACCGGTTGCGAAGCTGGATTTTTTTAATTTGGGTTTGGTTTAAAGTTGGTTTGATG CGAACTGACTTGTTTGAAAACTTAGTTTGAAGTGAAGTTGGTGTAAAATTCTCAACACAAGGCTTCATTTTATCTCTAAA ACTTAAATGTGTGTTTTAACTCAGTGGCCGGACATAAAAGAATTTGCTGGAATCACGTTTGGCAAAAGCAAACGAGAGTT TGAAGCGCATCACTGTGAAACCAAACACACTAGAAGCATTCGAAGTTCCAGACTCTTGGTTGTATTATGTCGTTTGGCCA ACTCGTTAAATCACATTTGCAGTTAAATGACCTTATCTTTAGATGTGATTCATACATGATATTGTGGCATTGTTCGATAT ATGCTTAATGTTGTTTACCCCACCTAGTGGAAAAATCTTTGGTTCTTGTTGTTATGTGATGACTTTGAGTATTGTTGTTG TGCTTAAAATGTTTATGTACGTTTTGTGACATTGGATCATATAAATATAGCATTAGATGTTGGGTTAGACAAAGTCGCTT GCTCTTGATACAGCAATACTTATTATTGTTATAACTGGCTCCTTGTAGGTATCACTGTTCAAGAGGCTACTTTTAATGGT GAGAAACTTGAGAGCAGAATCAGATCGCATGCATGCTTTAGCATGTATATGTAGAACAGCTCTTTGTGTAGACCTATTTG CCAAGGAAAGTGTCCGAAGAGGGCAGAAACCTCTTGCTGGAACTGATATTGCTTCCCTTTTTGAGGATACCAGAGTGAAT GATGATCTTAATAGCATTACAAGTAAAAGCATATTTAGGGAGGAGTTAGTTGCATCACTAGTGGAAAGTTGCTTTCAGCT GTCTTTGCCTTTGCCTGAACAAAATAACACTGGCATGGAGAGCAGGGTCATTGGAGCTTTGGCATATGGAACTGGTTATG GTGCCTTAAACTGGACTGAACCTGCTTTAGAAGTAGTGGAAGTTTGCCGGCCTTGCGTTAAATGGGATTGTGGTGGCCGC ACCTATGCGATTGACTGCTACTTGAAGTTGCTTGTTAGGTTGTGCTACATATATGATACTAGGGGTGGTGTAAAAAGAGT CAAAGACGGAGCTTCTCAGGACCAAATTTTGAATGAGACTAGGCTGCAAAACTTGCAACGTGAACTTGTGAAGGACTTAC GTGAGGTACACAAACTTTGAAGCCTAAAATTTGACACTGCTGCCAGCTAAAGATTTCTTCTTCTGACAATTGCATATTTG CATGTATGTGGCCAATAGCATCCAAACATTATTTTGTAATTATTGAAATATTTTCAAGGGTAAATTTATTATAAAAATAA AGCCTTTCAACTTTAGCCTACCCCCCAAACTTTCCATTGAAGTGGTTTAACTCTCAATTAAGACATTTGCCAATAAAATT GAAAATAAATTTGAGTTGTTGATATCATGGGATTACATTTGTCAGTTATAACTGAGTTACTCACCTTCATGGTGTACTGA ATTGTTTATTACCTTGTTTACACCATGGAGATATTTTGAGTCCTTTAGGACATTTTCATTTTATTCTCTTATAGAACCTG TTGGACATGTTTGAGCCAGCTAGTTATTTTTCTTGAGCAAGAGTTATTTATTTTGTCACTAAGTTTGATGTACAGAGAAT GATTTCTAGTTTTAGTTTTTTGCATGAAAGAGATAAAAATTCATAGATAGTGAAATTTAAAATAAGATGTTTGTTGAAAT TATTAAATTTTTGTCTCTAGCACCCTTGTACACTTGTTTTTTGCACTTCACCCTTTTATTTTATATTCTCGCTTTTATAA ATCAATTTCTACATAAACAGAGTTTCCTTAGACTTTTGAACTTTTTTCGACCCATAAAATAAAAATAAAGTGGATGGACT TTCTCACTCTTCAATCTTGCATGCTAATGTTTATGAATGGAACAGGTGAATACACCAAGAATATTGGCCCGCCTTATATG GGCTATTGCGGAGCACATAGATATAGAAGGATTGGATCCACTCCTTGCAGATGACCCGGATGATCCTCTTAATGTCATTA TATCAAATATTCATAAGGTTCTTTTCAATATTGATTCAACTGCAGAAACAACAAATAGAGTTCAGGATGTACAGGCAGTT CTTATATCTGCTCAACGGTTGGGATCGCGCCACCCTAGGGCTGGCCAGCTACTTACCAAAGAGCTTGAAGAGTTTAGGAG CAATCCTTTGGCTGATTCTGTCAGCAAGCATCAATGCCGTTTGATATTGCAAAGAATCAAATATGCTTCAGCTCATCAAG ATAGTAGGTGCGAATATTGTGCAAATTTATATTTAGAACTGCTGCTTCAGGTCATCATGTGTTGCCTCAATTGCTTCTTT CTTTTTCCTTTTCAGTGATCCTTTAATTGAAAATATAGTTTATTATCATTGCTTAATTTTATTGTTGAAGATGTTGGGTT TAGAATAGCTTCTCCCCAAGTTCTTCCTCGTTTGTAATATATTGGTGCTTAATAGCCATTTCTAATGTTACAAATTTCTA TGATCTTTATCTAATCAAATCAGAAATCTAATTCATTACATGATAACTTTGTGTCCTTATGTCTCTTACTATTAGCAATA TTTTACCCCAGGTGGGCAGGGGTTACAGCAGCAAGAGGGGATTACCCATTCAGCCACCACAAATTAACTGTTCAGTTTTA TGAAGCATCTGCTGCTCAGGATAGAAAGTTGGAAGGATTGGTTCACAAGGCTATTTTAGAGCTATGGAGACCTGACCCCA GTGAACTAACCCTTTTGCTGACACAAGGAGTTGATTCTACTTTACTTAAAGTTCCTCCTACTGCAATTACTTTAACTGGA AGCAGTGATCCTTGCTATGTTGAAGGTTACCATTTAGCAGATTCAGGAGATGGGAGGATCACTCTGCATTTAAAGGTCAA TGCCTCCTCAATATCTATATATACTTTGTCGTTTTTTTTCGGATTCTCTTATGGCATTTTCATACATTTAAGCAGACTGT TCGTATACACTGTTGTAGTGGTCAGAACTCGTAATATTTCCCTTTGAAAATGAGCAGGCACTTGATTTGAAGCTTAATAG ATTAAGTTTACTTTAGAAATGTGGTGGACCATATATCTATTGTTTTGAGATACATACTACGTGAGTCTGAGCCTGTGGCA AACTGATTTCGTTAATGGAACTTGGAAGAAAGTTGCTCATTTAATTTTATGTAATATTTTTGATATGATTACAACCTTGT TATTTATGAAAGAATGTTCCAATGTACTGGTAAGGAAGTTGCATTACTGTATGAATAGTATTCTGGTCAAAAAGAGATTA CAAGTTAAAAGAAAAAGAATTGACTATAATTATCAAACTACTGCTTGCAGATGTTCCTAAATGTGGATTCATAATTTCTT AGGAGAAATAGTGATGTTAAATTGTTAATTATTAATGCCTTAGAAATTGTTTCTTAATCCATTAATGAAGAAATTAAAAT GGCTTGCTAGAATCACTCAACAGTTTCATCTTTAAAGTCTAAATGATATAGATAAAGGATAATATTTGTTATGAATAAAT TACTATCAGACAGTTATTTCAGTGTTTCTGATTTATCTAAAAATGAAAATGCTTCAGGTTTTAAACTTAACTGAGCTTGA ATTAAATCGGGTAGATGTGCGTGTGGGATTATCAGGCGCATTATATTATATGGATGGTTCTTCTCAAGCAGTGAGGCAGT TGCGTAGTCTTGGTTCACAGGTTGGTTCTCCTCCTCTATAGTGCATATTCTGTTCCAGTTTGAAATGGCTATTTTGCATT TGTATCTTCTTGACTATCCTTTCACCTTTTTTACATGTCTGGAGAATTTTGATGGGTATGTATCTATGTATGTACACTTC TGATTTCTGAGTAGGATCATGCTTGGTTTGGGTTTAG
CDS sequence (LotjaGi1g1v0620200.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGACATCCTCTTCGCGCAGATCCAGGCGGATCTCCGCTCCAACGACGCGCTCCGCCAATCCAGCGCCCTGCTGCAAGC CCTGCAGCAGTCCGCGGCGGGGCGCGACATCGCCGTCATCGCCAAAACCGCCGTGGAAGAGATCGTTGCAGCACCGGCCT CCACCGTCTGCAAGAAGCTCGCCTTCAACCTCATCCGCTCCACGCGCCTCACCCCCGATCTCTGGGACACCGTCTGCGGC GGCATCCGCAACGACTTCCATTTCCCCGACCCCGACGTCACCGCCGCCGCCGTCTCCATCCTCGCCGCGATCCCGTCCTA CCGCCTTGCCAAGCTCATCGCTGATTGCAACAAGGAGATCTCCGACTGCTTCGACTCCCCCAGCGACACTCTCCGATTCT CCATCACCGAAACCCTCGGCTCCGTTCTTGCTCGCGATGACCTTGTCACGCTCTGCGAGAACAATGTCAACCTTCTCGAC CGCGTCTCCGCCTGGTGGACCCGCATCGGCAACAACATGCTTGACCGTTCCGATATCGTCGCGAAGGTCGCGTTCGATTC CGTCGGGAGGCTCTTCCAGGAGTTCACCACCAATCGGATGAGCAGGCTCGCCGGAGATAAGCTTGTGGACAGCGAGAATT CCCTTGCTATCCGGTCCAATTGGGTTTCCTCCATGGTTGATCTCGTTTGGAGGAAGCGCAGCGCTCTAATGGCGCGATCG TTGGTCTTGCCCGTTGAGAGCTTCCGCGCCACGGTGTTTCCAGTCGTTTACTCCGTTAAGGCCGTCGCCTCCGGTAGCGT CGAGGTGATTCGGAAGCTGTCCAAGGCTTCTGGTAATGCTGCCGGGGGTAATGAGGTTGATTCCAATGCGGAGAAGTTGG TGGGTGTTTCGGATGTGGTTACTCACTTGGCACCCTTCTTGGTTTCGTCGTTGGAACCCGCGTTGATTTATGAGGTGGGG ATTAATATGCTTTATCTGGCTGATGTGCCTGGAGGGAAGCCTGAGTGGGCATCACAATCCATCATTGCCATTCTCACTCT GTGGGATAGGCAGGAATTTACATCTGCTAGAGAGAGTATTGTTAGAGCTGTTGTTACCAATCTTCATCTCCTTGATCTTA ACATGCAGGTATCACTGTTCAAGAGGCTACTTTTAATGGTGAGAAACTTGAGAGCAGAATCAGATCGCATGCATGCTTTA GCATGTATATGTAGAACAGCTCTTTGTGTAGACCTATTTGCCAAGGAAAGTGTCCGAAGAGGGCAGAAACCTCTTGCTGG AACTGATATTGCTTCCCTTTTTGAGGATACCAGAGTGAATGATGATCTTAATAGCATTACAAGTAAAAGCATATTTAGGG AGGAGTTAGTTGCATCACTAGTGGAAAGTTGCTTTCAGCTGTCTTTGCCTTTGCCTGAACAAAATAACACTGGCATGGAG AGCAGGGTCATTGGAGCTTTGGCATATGGAACTGGTTATGGTGCCTTAAACTGGACTGAACCTGCTTTAGAAGTAGTGGA AGTTTGCCGGCCTTGCGTTAAATGGGATTGTGGTGGCCGCACCTATGCGATTGACTGCTACTTGAAGTTGCTTGTTAGGT TGTGCTACATATATGATACTAGGGGTGGTGTAAAAAGAGTCAAAGACGGAGCTTCTCAGGACCAAATTTTGAATGAGACT AGGCTGCAAAACTTGCAACGTGAACTTGTGAAGGACTTACGTGAGGTGAATACACCAAGAATATTGGCCCGCCTTATATG GGCTATTGCGGAGCACATAGATATAGAAGGATTGGATCCACTCCTTGCAGATGACCCGGATGATCCTCTTAATGTCATTA TATCAAATATTCATAAGGTTCTTTTCAATATTGATTCAACTGCAGAAACAACAAATAGAGTTCAGGATGTACAGGCAGTT CTTATATCTGCTCAACGGTTGGGATCGCGCCACCCTAGGGCTGGCCAGCTACTTACCAAAGAGCTTGAAGAGTTTAGGAG CAATCCTTTGGCTGATTCTGTCAGCAAGCATCAATGCCGTTTGATATTGCAAAGAATCAAATATGCTTCACAATATTTTA CCCCAGGTGGGCAGGGGTTACAGCAGCAAGAGGGGATTACCCATTCAGCCACCACAAATTAA
Protein sequence (LotjaGi1g1v0620200.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MDILFAQIQADLRSNDALRQSSALLQALQQSAAGRDIAVIAKTAVEEIVAAPASTVCKKLAFNLIRSTRLTPDLWDTVCG GIRNDFHFPDPDVTAAAVSILAAIPSYRLAKLIADCNKEISDCFDSPSDTLRFSITETLGSVLARDDLVTLCENNVNLLD RVSAWWTRIGNNMLDRSDIVAKVAFDSVGRLFQEFTTNRMSRLAGDKLVDSENSLAIRSNWVSSMVDLVWRKRSALMARS LVLPVESFRATVFPVVYSVKAVASGSVEVIRKLSKASGNAAGGNEVDSNAEKLVGVSDVVTHLAPFLVSSLEPALIYEVG INMLYLADVPGGKPEWASQSIIAILTLWDRQEFTSARESIVRAVVTNLHLLDLNMQVSLFKRLLLMVRNLRAESDRMHAL ACICRTALCVDLFAKESVRRGQKPLAGTDIASLFEDTRVNDDLNSITSKSIFREELVASLVESCFQLSLPLPEQNNTGME SRVIGALAYGTGYGALNWTEPALEVVEVCRPCVKWDCGGRTYAIDCYLKLLVRLCYIYDTRGGVKRVKDGASQDQILNET RLQNLQRELVKDLREVNTPRILARLIWAIAEHIDIEGLDPLLADDPDDPLNVIISNIHKVLFNIDSTAETTNRVQDVQAV LISAQRLGSRHPRAGQLLTKELEEFRSNPLADSVSKHQCRLILQRIKYASQYFTPGGQGLQQQEGITHSATTN
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 691 | 691 | 0.0 | ||
| SUPERFAMILY | 4 | 618 | 615 | 3.58E-10 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Endocytosis | A vesicle-mediated transport process in which cells take up external materials or membrane constituents by the invagination of a small region of the plasma membrane to form a new membrane-bounded vesicle. |
Expression pattern of LotjaGi1g1v0620200.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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