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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0630400 |
| Transcript ID | LotjaGi1g1v0630400.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Zinc finger constans-like protein; TAIR: AT2G33500.1 B-box type zinc finger protein with CCT domain-containing protein; Swiss-Prot: sp|O22800|COL14_ARATH Zinc finger protein CONSTANS-LIKE 14; TrEMBL-Plants: tr|G7KW76|G7KW76_MEDTR Zinc finger constans-like protein; Found in the gene: LotjaGi1g1v0630400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:118346355..118351187) extracted from Lotus japonicus Gifu genome v1.2.
AATATCAATATGCATGATCATCTTCTAGTAGGCCCAAAGTCAAAAATCTCTCATCAGTCCACAAAACGAAAAAAAAAAAC ATGGAGAAATGGAATCTGCACACACAGCGCACGCAGTGCATACAGGGAATGCACATGGAAGGTATTCAAAAAAGTGACGA GATATCTTTTAGTAGTCCCCACCTCTCTGCTTCAGATTGCGTCTCCACCTTCTCCATGCTTATCATGTGCACCTTCCTCC TCCTCCCTCATAAATACTATAAAATACTATTCTACTCACTACCAGTACCACTTCTTCTACCATCCCCTATTCCTATCTTC TCTTAACTTAACCTTCTTCAACTTGTATTGTTGTCTCTACATTCACACTTTTAACATCTCGATCCGACGACTAAACTAGT CTCATAACAAGTCTTTTCAGCGCGCTTTGTCCTAACTTCTTCGGCGATGCCGTTTCGCTGTGATTACTGCGACTCCAAAA GCGCGGTGCTGTATTGCAAAGCAGACTCAGCCAAGCTCTGCTTGCTTTGCGACCAGCACGTGCACTCCGCCAACGCGCTC TCCCTCAAGCACGTGCGCCACCAGATTTGCGAAGCTTGCCAAAACGACGCCGCATCCTCCCGGTCCTCCACCGACAATCT TTCCCTATGCGACCACTGCCACTCCGGCGCCGCCGACTCATCCCGCCACCGCCTCGAAGGCTTCTCCGGCTGCCCCTCCG TTAGCGAGATCGTCACCGCCCTCGGGCTCGATTTGAAGCAAAGCTGCTCCACCATCGCCACCGTTTCGGTACCTGAATTC GAAGGTCTGTTGGTTGTTCCCTCTCGGAATCGTAGGGATGAGGTGTACGAGCAGCTTGCGGAGGTTGCGAAGAGGAAGAA GAGCCTCTCAGAGATAGAGGGTTCTCTTTCGCTATGTGGGGAACTTAAATTCAATTGTGGTGGTGTTGATGACTTGTTGC TGCAGCAAACGACGCCGTTTACATCTCTGCTCAGTTTGCCATCTGAATTCGATGCGAAAAACAGCGAGTATGGAACTCAA CAAGGGGATCTTGCTTGGAACTGCAACTCCCAATATCAGTCTCCTCAGGTAATTCTTCACAAGCTCCCTCTAGCTATGAA GTTTGTGGTTTTTTTATTAAGTTAGTTGCATTTGTACCATAGTTTAAGTAAAAGTAATTATTATTATTGGTGTTTGAGTT TAAGTTTAAGTTTAAGGGTGAGTTTGGGTAAACAACTTAATTGAACGCGCTTACAATAATAAGTATTTATGTACTTATTT AGTAGTATAAGCTTATAGATATGTTTAAGAGATTATTTGAAGCTTATATGAGTCATTTCATAAGCTTAATCAAACACTTG AATAAGTAATAAGGTTAGTTTTGGTTTAATAATCAATTATAGAAAAAATTCCAAATATGCAGCTTTTGGGTTTCATAATT GATTCTGAGGAAAGAGAAGTTGATCCAAAGCATGCTAATGGTAGGTTTTTGACTTGTAATAACCAAATAACCAATAAGGT CTTTCCAATCTCTTGACAATATGATGTTGGGGCATTAAACTTTGGACAGTGAAGTTCTGCATTTACTAGTTCAAGTGCTT GCTTGTATAGTGCAGCTTCCTTGAATTACATTCCATTTGGAATTATCATTTTGGTAACCATCTCACTTACAGCTTCATCT TACCTTTACGTAATTATATAAAAGTTAAAACCAACATGCACATGAACTGTTTCATGCTCATTGTAAAACCACAAAATCTG CTTGTGAAATATTTGAAAACATTTTCAGTTTTTGTTGTACTTGTTGTTGAAAATCTTTGCATTTCCCCAAGCTAAGGCCA CTAAGTTTCAGACTGCATCAGCTGAATTTGTTACAGTGAACTGGTTCAACTAACATCCTGGCATGTGTAAAACTGTAAAT ATATATATTGGTTGTACATGAATTACATGCCTGTAATTAATTAGTGCTCTTTTTTTTTTCCCGCAGGTGTGGGATTTTCA GTTGCAGAAATCTAGAGATTGCGATGAAGCAAGAATGGTGACATTTGATGGTCTAGAAGAACCTTTCCTATCGATTCAAA ACTCATTCCAAAATGTTCCCAGTATGAATTGCTCAACAATCGGTGATGATATTCTATCAAGAAGTGTAAGCCATTCTATC CATTTAATTATTTTCAGTCCATGCCAGTTAACCTGCAGTACACTGAACATGTAGTCTCCCACCAAGTGGTCCTTTGAACA TAATGTATTGAGTGACCATAAGTCTACGACAGAATAGTACTAGTTCACTAGTGTTAGAGGAGTCTTCTGATTTAATATCT TCAATTTACAGGCATGTGCAAGAAGTTATAGCCTAGTACTTGTCACTTGTTGTAAAGCAGAGAGCCATTGGATTGCTTGC AACTGTTTGTGGGAATGTGATGAAATGGCTTTGAGTGGATGATGCAAATGCATACTGACTGTGTATCATCGGTGAGGGTG TTGTTCGAATGTAGAAATGCACTATAGGGTATTAGGGTTCTTTGTCTTCCTGTCATTTTGAGAAATATGCTATGTTACAC ACCTTAGTTATAATGAACTACTGGCTTTTTATTTATTTTAAATCAATGCTGAAAAACAAAGTTGCAGCTCAAGTGGGTTA ATAGCTTTGTTTTTTTGGTCAATGGGTTAATAGCTTTGAAATCTTAGCATACTGACAAAACTGTGGGCCTGCATAGCTTT GCTGTAGTGTACAGAGTTCACATGGGGAGGGACGATAGAGGACGGAAAGTTTTTATTGCTCAAGATCTTCCTACTTTAAT TGTAGCTAGTTTAACTTCTAAGTTACAACTGCACCCATACATAGTAAACCCACAGATTTATGTATATCACAAGTACTGCC TCCGTCTTTCTTTGAGGCATTTTTCTACAATTTGTTGTGTTGTGACTTTAGTGCATAGATTGCATTAAGTTCCATATGAT TTGGCCTTCATTTCAATCATATTTGTCATATATTTTGTATTTCATGCTTGATTTCATCTGTACTGAACCAGCAATTAATA ATTGTCAGTCTTCACAAAATTTGCAGCACCAATCGGATCAGTCATCATCAAGCCATGTGAAGAAGAAAGAAGAAAGCAAC AAAAAAACTAGAGGTGGGTTGTCATCAGAGTCCAAATTCATTGAATCCATGACATACAGTGACACAAACATGGTAATGGA GCATCTTGCTTGTGGCAATGAAAACATGAGCACCATAAATGCCAAGGTTAGCTTAGAAGAGCTAGCAAAGAACAGAGGGA ATGCTATGTTACGCTACAAAGAGAAGAAGAAAACTCGAAGGTATGTTCAATATTTGCAGCACATGCAAAATACATACAAA AACCTATACATGCAGGCTTTGAATTTGAGAACATGCCCTTTATTTTTGTATACTTTTTGAAAGATCACATTTTAAAGTTT AAGCATCACACCTTGCATAGGTATGATAAGCACATTCTCTATGAATCAAGGAAGGCCAGGGCTGATACAAGAAAGAGGGT AAGAGGTCGATTTGTGAAGGCGGGTGATACAAATGATGTTCAAGAGTGTTGAGTGCCTTTTTGGAAATCTCACACTGGGG CATTGCCCCATTTGTGTGTATACATATGTTATGTTATACTACCAATGAATGGTTGATTCAAGTGGTACATGCTTGATTCT CGTTAAGCAATGTATTGAGTTCGAGAAGGAAGAGCTAGCTCCACAAAGATGTGAATGTGTAGGACTCGAACAAGGTTGCC TCCCCTGGGGATACAAAAGTGTTAGATAAAACAAATGTGTATGTTAAATATTGATAGATTGTAGTTTTAATGAGGAATTT CCCGATTGGTTTGATTCTTTCGTATAGATAATTTATTTGAATTTTCATTCATCACTTGTAGAGGGGAAAATTTATCTCTA CTAATATGACATTTTGTTTTTTGCATAACAGAATCATGTCAAAATTGACACTATATTTAAACAAGTGATATAAGACCTAT CAAAATTCGTGGGACTGCATTTATCTCTTTCCTTACCTAATATGGCACATGAGAAAACCTCTCATAAATAATCCAGCCCC ATACCTTTAGTCCATTAACTGGTCTTACAGAAAACTCAATGCTGAGGAAATTAACTAAACCAAGAAACACAAATTCCCAT CTATGCCTCGACAGAGCTTAAACAAGAGAGAGCTTTGATGTGCTGCCACCCCCTCTGGGGTCACCTCCCTCAGGTCATTC ATCCGCCCAATGATCCAAAGGTCAAAAAGTACCATGATGCCAAATGCAAGATCTTCCGTGGCCTTTCAACAGAAACTCTC CCATCGATCAATGATGGCCCAAGCCTTAGCATACCTGCAAAATGCTAGGACTCGAAACTGTAATTGTCAATTAAAGATTA GATGCTCATTGCAGAGCCTCTCTCGACATTCATTTCTCAAGGTTATGTTGTTTTTTTGGTCCTAGTAGGTTAGACATTGA AGACTTTAAAAGACACGAGGAAGAATAAATCATCAACATGGAGATGAAAATTCTTATAGAAGTTTTATGTTCAGGGCTAG GGCAATCTAGCATCATATTTTTCCTCATTAAGTGAACCAATTAACCCACAAATTTGAACCAACTAAATTGGTTTAGTTTA GATCATCGGATTCATCGGATTAATCCGAGTCAATGAGCCCCTAGTATTAATGACTCTATTCCATCCCGATTAAATTAGGG AGTTTGAAAATTGATGGTAGGTAATAGAATTGGTTGGGATAAGTTCCTTTACCTTCCTTTTCATTCCATCATCATTTGAT AAAGTCAAACAATGAAACATAAATCATTCCATC
CDS sequence (LotjaGi1g1v0630400.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCCGTTTCGCTGTGATTACTGCGACTCCAAAAGCGCGGTGCTGTATTGCAAAGCAGACTCAGCCAAGCTCTGCTTGCT TTGCGACCAGCACGTGCACTCCGCCAACGCGCTCTCCCTCAAGCACGTGCGCCACCAGATTTGCGAAGCTTGCCAAAACG ACGCCGCATCCTCCCGGTCCTCCACCGACAATCTTTCCCTATGCGACCACTGCCACTCCGGCGCCGCCGACTCATCCCGC CACCGCCTCGAAGGCTTCTCCGGCTGCCCCTCCGTTAGCGAGATCGTCACCGCCCTCGGGCTCGATTTGAAGCAAAGCTG CTCCACCATCGCCACCGTTTCGGTACCTGAATTCGAAGGTCTGTTGGTTGTTCCCTCTCGGAATCGTAGGGATGAGGTGT ACGAGCAGCTTGCGGAGGTTGCGAAGAGGAAGAAGAGCCTCTCAGAGATAGAGGGTTCTCTTTCGCTATGTGGGGAACTT AAATTCAATTGTGGTGGTGTTGATGACTTGTTGCTGCAGCAAACGACGCCGTTTACATCTCTGCTCAGTTTGCCATCTGA ATTCGATGCGAAAAACAGCGAGTATGGAACTCAACAAGGGGATCTTGCTTGGAACTGCAACTCCCAATATCAGTCTCCTC AGGTGTGGGATTTTCAGTTGCAGAAATCTAGAGATTGCGATGAAGCAAGAATGGTGACATTTGATGGTCTAGAAGAACCT TTCCTATCGATTCAAAACTCATTCCAAAATGTTCCCAGTATGAATTGCTCAACAATCGGTGATGATATTCTATCAAGAAG TCACCAATCGGATCAGTCATCATCAAGCCATGTGAAGAAGAAAGAAGAAAGCAACAAAAAAACTAGAGGTGGGTTGTCAT CAGAGTCCAAATTCATTGAATCCATGACATACAGTGACACAAACATGGTAATGGAGCATCTTGCTTGTGGCAATGAAAAC ATGAGCACCATAAATGCCAAGGTTAGCTTAGAAGAGCTAGCAAAGAACAGAGGGAATGCTATGTTACGCTACAAAGAGAA GAAGAAAACTCGAAGGTATGATAAGCACATTCTCTATGAATCAAGGAAGGCCAGGGCTGATACAAGAAAGAGGGTAAGAG GTCGATTTGTGAAGGCGGGTGATACAAATGATGTTCAAGAGTGTTGA
Protein sequence (LotjaGi1g1v0630400.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MPFRCDYCDSKSAVLYCKADSAKLCLLCDQHVHSANALSLKHVRHQICEACQNDAASSRSSTDNLSLCDHCHSGAADSSR HRLEGFSGCPSVSEIVTALGLDLKQSCSTIATVSVPEFEGLLVVPSRNRRDEVYEQLAEVAKRKKSLSEIEGSLSLCGEL KFNCGGVDDLLLQQTTPFTSLLSLPSEFDAKNSEYGTQQGDLAWNCNSQYQSPQVWDFQLQKSRDCDEARMVTFDGLEEP FLSIQNSFQNVPSMNCSTIGDDILSRSHQSDQSSSSHVKKKEESNKKTRGGLSSESKFIESMTYSDTNMVMEHLACGNEN MSTINAKVSLEELAKNRGNAMLRYKEKKKTRRYDKHILYESRKARADTRKRVRGRFVKAGDTNDVQEC
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SMART | 1 | 47 | 47 | 2.1E-7 | ||
| ProSiteProfiles | 1 | 47 | 47 | 9.371 | ||
| CDD | 3 | 35 | 33 | 1.54445E-7 | ||
| PANTHER | 4 | 379 | 376 | 9.1E-100 | – | |
| Pfam | 4 | 43 | 40 | 2.2E-5 | ||
| PANTHER | 4 | 379 | 376 | 9.1E-100 | – | |
| MobiDBLite | 259 | 294 | 36 | - | – | |
| MobiDBLite | 273 | 290 | 18 | - | – | |
| Pfam | 337 | 379 | 43 | 2.2E-15 | ||
| ProSiteProfiles | 337 | 379 | 43 | 14.217 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
| Molecular function | Zinc ion binding | Interacting selectively and non-covalently with zinc (Zn) ions. |
Expression pattern of LotjaGi1g1v0630400.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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