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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0651900 |
| Transcript ID | LotjaGi1g1v0651900.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | ELMO domain containing protein; TAIR: AT3G03610.4 ELMO/CED-12 family protein; Swiss-Prot: sp|Q54YW1|ELMOA_DICDI ELMO domain-containing protein A; TrEMBL-Plants: tr|I1JK39|I1JK39_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0651900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:121122790..121129673) extracted from Lotus japonicus Gifu genome v1.2.
GTTATTTTAGAAAGTGACACATAAGATAATAAATGACCCACTAAATTAGAGTATAGAATGCCCAATTTGACAATGCTATA ATTTCCTTTACATGGAAGCAACCAAGATTTAGATTTAGAAGGAGCTTCATTTCAAATTCATTCTCAACGCTTGAGAGTCA AATCAACCGAATCGTTATTTGGGGGTTAGGTCAAGTCAAGAGTTTGCACACCCAGCACGTCTCTTCAGAGCGAGCTGGAT CACGCTACTGTTGATTTGGTATTCAATACATTTCATCTCCTTTTTCTTATCAAGCACGAAATGCAATACCGAAAGTTTCA TTTTTTTATAAAACCCCCAATTTTTTACCCTTTTGCATATCTATGCTAAAAAGCATTCATGGTTGGGTATCAATTGATCC TAACCCACCGATTCTGTTGATTGGCATTTCAAATTCTTTCAATTCATTCTGTTGGGTATCAATTGATCGGGAAAAGGAGC AGTTTTTCCCCATTTTTATTGGTATTTTCGGTAAATTGGTCATAATTAGGGTTTATGTAATTTCTATGTTGATCAATTTA TGTGGGTTATTTTCGCTGTTATGGTTGTGCCCTTTTTGAAATTCACTTGTATTAGTTCATGTGTTAATTTACTGTTCTAT GAGTTGAGTAATTTGATGCCCCTTTTATCTGTTGTTAGCAAATTGGACTGGGTAATCTCATTGTCGTGTTTATCGACATC CGGAACGGATTAAAATGATGCTTGTGACATGCATTATGGGAGAAATAAATTGGAGTGTTAGCTGGAGTGATGCATGGAAA TAATGGTCCCTTTTTTGATTTGTAGGCCGACCTATATTAGAGAATCATATAAATGTCTTCAAGAACATTGAGGAGAAGGC TCCATCATGGAGATGTTGATGGCAAAAGGCAGGAGCATTTGGAGGCTTCGGGGTTAGATGCTTTGAGTGAGCCCTTGCTG GGGGGTGATGATTATATCGAGAATAAGAAGGTGAGAAACTTTGGTAATCTTCATTTTTTTTAACTGTTTTTCATTTTGTG ATGTTAATTTTTCTCTGTCATAGATATGTACACTTGAAGATATTTGGGATGACGAGAGGAAGAAGGCGCAGTTTCACTGG ACATTTTTATTTTCAAACCTCATAGCGCAATGGGCACAGTGGTTAGGTATATGTATGGTTGTTTTGGATGGTCAAGCAAA TGCAATTAAGCTTGGTAGTGAAGTAGTAGGATGTTTCGCTTTTGTTAGCACATACATAGCAATACTTTTACCAGACTGTT ATTCCATCATGGTTTTTTTTTTATTAATTATATCTAGTTTGATGTTTTACATATCTCTACCTAGTTTCTAATAGGATATA TCTCCTTCTCTCTAGCGTATGCTGATTGGAACATTTTTCACACAATTTCTTTCATTTTCAATTTCTCAGATGAAGCCCTG TATTTGCTTTAAAACATGATTCTTGTGATCTCAGTTCATGTAGGACATATTTACCATCACTGGTAGTTATGTAAATTCCA ATGCTTTTGTCACTCTTGTAAACGAAAGAAGTCCATGATCTTTCTTCCCCTCTTAAGTCTGAAGTCTTACATTTAATATA GCAGCTAAACACATCAGTCTTAGGGTTGTGTACTTTGCATAATTAAGCATTTCTATTGGAGCTTGTGTATTTGTTCACTG AACTGATGTAAGAAGGTGATTGATAATGGCCGTGAATTGAATTTGGTGGCACAATCACATGGTGTTTGGTGTAGTATTAC GTACTAGGTTTGAAATCTTACATTACAGATAGAGAGAACTGAGAAGACAGAAGAGATGCATTGGAATGTGTAGTATTTTG TAGATAGATGAACTTACTATCAGAGGGATCATTTATACATTTCTAAGAGCCTCATTTACGGTGCTTGGAAAAAATACGAA CCTGTTCTATAAAATAGTAAATGTCAGGGTTTTATGTATGTTTTACCTGCATCTTTTCCTCATTGCTTAATGGCGTACAA ATAAGTAGATGACACATGCAGTATGTCTTGATTTTAGTGGTGATTATCTGACCTGTGACCAATCATTTCATATTGTCCTT GCAGCAAACATTGTACTAGGGTCTGGATCTCTTATTGGGCGTCTTTTATCTGTTTCTTCTACTGCTCTATATTTGCAAAA TAATAGGATGCTTCCCCAACCTCTTACCCCTCTGCAGGTATGTCTAGTGAAGTAGTGATATCTTATTTTAATTCTCACGT GCTTGGTGTAGCCAAAATCAAGTAACCAACTTCCAATTTAATCTTTTGGAAAGTAATTCATATGATTTTGATTTTGCATA TTCTATATAAAGGCCATACATTTATACCCTTTCTGAAAATACAATTGATCTAGATAATGGATTTAGCAGACCTTTCTGAG TATACCTTTTGAATCAATGTCTACCAAACCCCTTAACTCAACTACCCGTCGTCATTTGAAAATGAAATGGTGCCAAGGAA CTTCTGATAATAGAAAAACACTTATATGATATTATCCCTGGACTTTGTTTGATACAGCCTTAAAGTGTCTCGAATATCTG CTGGTGTTTTGTTTGTAAGGCATAGGTGGGCAGTGGATCGTTGTTTGGAATGTGATGATATGTATTTGGTTAAACTAGAA ATGGAAAATTTTCACTTTGAAAGAGAAATCCTTGAGATTTGAAAAATGATATGTTACCGAATGCCTTCTTATTAATAATA GCTTTAGCTTCTAGCTGTATGCTTTTCCTTTTTTTACTCTGGATTATCTGCTACCTGTGGCTATTTCACATTTATTTCAT TCTTAGGAAGAAAGACTAAGAAACTTACGGCAGCGGCTTGAAGTCCCCTTTGATGGTTCTAAAACAGAGCACCAAGTACG TATTTAATGTTTCCTTCTCAATCACATTACTGATATTTGCCCTTTTTATCGTGCATTCTGATTTTCTATTTTGCTCTGCA ATCTGCCTGCGTGCTTGATAAACAATCTGAATGTTTTTGGTCTGGAATGTGGGCATGGAAACTACATGCAAATGCTTGTT TATGATAGATTGCAAGTTTTAAATTGAGTTCCTTTCATGAATGAATTAAAAGTTGGCCAAGGATGATGATTATCCATTCC TTTGTTGCATGTCTATAGATTGCATAGCTATTTAATCTAGCCAGAGGATGCTTTTCAGAATATTTAGTATAAATTGTAAA AAATAAAATGTGTTATGGACAGTTTCTTCTATTACATTTTGAAATCTCCCGTTTATGGGTTACTTGCAGGATGCACTCAA ACAATTGTGGAAATTAGCTTTTCCTGACAGGGAGATTCCCCCACTTAAATCAGACCTTTGGAAGGAAATGGGATGGCAAG GTTCAGACCCATCAACAGATTTTAGGTTTGTGATTAAAAGCATTATATTGTTGATATGAGTATGCAAAGGGTTTTATAGA GCAACAGGTCAAAGATTCAAAACATTATAATTCCATTAAGGCCTTGTTGGCTTACTGATGGGATGTGACTGAAAATATTC TGACCCTCTTATCTTTCATATGTTGATTTCCAAAATCATGGACAAACACTTTGTCCTCGTAGGTTAGACTTACTTCTAGA TGATAAGAACCAACCATTCCACAAACCTAGCCGTTGTATTTGGAGAGCCCAAGGCTTTTATAAACCCCACTCTAGAATCC CATACTTCCAATGTGGGACTATGTCTCATGCCTTGCAATTGCAATTGGATCCTAATTCCCCACCACACTCCGCAACCCCG ATGCTCATGCGGGCTGGCTGTGCACTAGCCCTTGGCTAGTCTCTGGCGAACTCGGCAATATCAGTGTCACCATCCACGGC ACTAGTTAGCTGAGAGACACGATGGAAGGCTTTGATACCAATTCATAAGAACCTTCAAGGAATCATACCACGATGTAGTT GGTGAGCCCAAGGCCTGATAAACCCCACACTAGAATTCCATATTTCCCATGTGGGACTCAAGTCCCATACCTTGCCATTG GATCCTAACACTAGATTTTTGATAGTTTGATTTTGGATTTTAAGGGGCTGTTTCTGGTGTGCTTTTGGAATTAGTGGGTT ACACTCCTTTGGCTTGTTCTTAATTAAACAAGACTACCTCAAAAAGAACTCTGAGGAACATTTGCCTAGTCTTTCTGTCT TAGTGCTACAACTTTTATGTAATGTATGAGTTCTTTCCTAGAATAAGATAAAGGAACAGAGTACAAATAAGTCATTTTGT AAGAAAATATTTTGTTCAGAAAATATCTCCCGAAACAACATAAATTTCTCTGACAAGATGTTTCTTAAGCATAATCTTGA TCTTCAAACACCAGTTTCCTTAATTTCGGTAATTTTTATGCGGTCAACTGTATCTTTTTTCTCATGGAGTCATGGATGAG CTAATATGAACTATATATCCATGGACTGCAGGGGTGGAGGATATATATCATTAGAGAACCTCATTTTTTTTGCACAGAAG TATCCGGTAAGTTTCTTCTATTGCTTTTGCATTTGCATTCACAGTTTCCCTTAAGCAGATTTAATATTTCTTATCAAAAT ATTATTACATTGATAATCCCTAAAATACGCCCTAAAAAAATGTTCTAGCGGTAACTTCCCTACCACCGGATGCTAGATAG CACTGCGATGATCACTATTCTGTCGCTTTAGTGGCTGCAAGCTCACAACAACCGCCGCTCTAAACTGCAATGCAATATGC AACACAGCAAACAGGAGCAGTCCGGGGCTGCTACTTGCTGCGTATAGCGCGATATTGACAACCTTATGTGGTCCTAGAGC CCCCAAGAAAAGGGAAAAAATGGCTAGATTCATTACCTTAACTCAAAGAAACTGGAGGTCTAAAATATACATATCCTATT ATCCATACTTGAAAAAATCAAGGGACTCAAGTGATTTGCAACTGCAAATGATTGTTAGATTGGGTCCCCTGACATAACAT CACTGTCCTACATGTTCCCCTCGATTCTATGATCAAAGCCCCTGAAAATTTTCAAAAGAAATTGCTAAGATTTTTCAAAA ATAATAACTTATAATCCTAGCTTGAATGTTTGCCTGAAATTCACTTGAAGTATCCAAAAAGCTATTCCAAATTTCAAATT GTATATGGTAGCTGGATAATGTACAAGTAAATATGTTGAAGTTGCTGAACTAGTGCAACATATCACACATTTGATAATAG AGTCATGTTTGATTTAAGAAGACTTCTTTTGAAAATTCATCAGAAATGGTTTTGATGAAGATAGATTCGTACTGGTGATA TTCTTGTAAGCAGCCCTCATATACATCTCAGTCTACAAATTTACAGTGTTACTGAAAGCCATTTTAACACCTTTTTTTTC TTTGGATTTCTGTTTACATGACTTTAAATGTCGTAAATATAGATTTTAGGTTCATTGTGCATGTTCAAAATATTTTTTCG CATTATATACTTGTTTATGTGAACATCTACATAATGCTGTTACATGCTTTTATTTAAGTAGTGTGATTTTGGTTAGTAAA GCACATTTCTACTTTGCACTATTTTAGGGTTCATTCCAGCGGTTATTGCATAAACAAGATGGAGCCAGAGCAGAGTGGGA ATATCCATTTGCAGTAGCTGGAATCAATATTTCTTTTATGTTGGCGCAGATGCTGGATCTTCAAGCAGGTAAAAAGATCA CTCTTAAGAAGAAATTCCGTGGTTAAAATGATGGTTGTTCGATGCGCTAGGCTGGTATCAATTTAGGTTGTTTGTTAGTG TGTTTGGAAATCCTTCTACCATTGATTCCAAGCAAAAATCAATTCTAGGGAGAAGCTTCCATAAGTAGCTTATGGGTTTC TGAGGAAGAAGCTGATCCGAGCGTGTTGTTTCATCATGCCACCTACTCAATGTTGTTGCGGGGTTTCCTTATCTGCACTC AGTGTTGGTGGTGGTTCTTGAAAATCATCTGATGAACTATTTTCCTTGCAGGGTATCCATCTTCTTTGTCAGGATTCCGT TTCCTGCAGCTGCTTGAGGAGGATGAAATGGCATTCGACATCCTTTATTGTGTTGCCTATCAAATGATGGATGCTCAGTG GCTAGCAAAGCGTGCTACATATATGGAATTTAACGTAATATATCGTTTAATTGTATTTGTTCTTGGTTAATTTTGTTATT ATTATTATTCTGTGATATATTTTTTCATTCATTTATATTTTCTTTTTTCATTAGGATGTTTTGAAGTCCACAAGAACGCA GTTAGAGCGTGAGCTTGCTCTTGAAGACATCTCCAGGGTGAAAGATTTACCTTCTTACAACATGTTGAGAGATGATTAGG ATGTTCATCTAGTTTAACATTTCTCTCTTCTTTTTTTGTTTGCGGAGAATGTTAGATAAAATGTATCTAAGGCATTTGTC ATTTGATCTATGAATAGAAACATGAAAATCAAATGAAAATGGGACCCTAAATATTAGATCTTTGTATTGTCCATTATCTC TTGTATATAATCCAACCAAATTGGAGGTATAGTTTGCTATTTGCTCCTTTCTATAACAATGAACTTAAGTACGACACATT GCGTGAGTAATGACTCATTTGAGAGATGAAAATGATAGATTTTTACCACGATTTATACCCCACTTGTATGTCAATAATCA AGGGGGTGAATAGTTGGTGAGTAATGTAAACAGTAATGATATACCACTAAACAGTACATACACTTTGAGATACCGTTTTC TCCCTCCTTATCACTACTCTCTTTCGATTACATGACATTTATCTGTTATCTGCCATTTCTTCTTATCTCTCTTTAATAGT CTTTTTTGATTGCACTAAGGTATCTTCATAGTCGACAATCGTGAGATTAATCTTTTTGAGGCTTTGAGATTATATTAAGT GGAT
CDS sequence (LotjaGi1g1v0651900.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTCTTCAAGAACATTGAGGAGAAGGCTCCATCATGGAGATGTTGATGGCAAAAGGCAGGAGCATTTGGAGGCTTCGGG GTTAGATGCTTTGAGTGAGCCCTTGCTGGGGGGTGATGATTATATCGAGAATAAGAAGATATGTACACTTGAAGATATTT GGGATGACGAGAGGAAGAAGGCGCAGTTTCACTGGACATTTTTATTTTCAAACCTCATAGCGCAATGGGCACAGTGGTTA GCAAACATTGTACTAGGGTCTGGATCTCTTATTGGGCGTCTTTTATCTGTTTCTTCTACTGCTCTATATTTGCAAAATAA TAGGATGCTTCCCCAACCTCTTACCCCTCTGCAGGAAGAAAGACTAAGAAACTTACGGCAGCGGCTTGAAGTCCCCTTTG ATGGTTCTAAAACAGAGCACCAAGATGCACTCAAACAATTGTGGAAATTAGCTTTTCCTGACAGGGAGATTCCCCCACTT AAATCAGACCTTTGGAAGGAAATGGGATGGCAAGGTTCAGACCCATCAACAGATTTTAGGGGTGGAGGATATATATCATT AGAGAACCTCATTTTTTTTGCACAGAAGTATCCGGGTTCATTCCAGCGGTTATTGCATAAACAAGATGGAGCCAGAGCAG AGTGGGAATATCCATTTGCAGTAGCTGGAATCAATATTTCTTTTATGTTGGCGCAGATGCTGGATCTTCAAGCAGGGTAT CCATCTTCTTTGTCAGGATTCCGTTTCCTGCAGCTGCTTGAGGAGGATGAAATGGCATTCGACATCCTTTATTGTGTTGC CTATCAAATGATGGATGCTCAGTGGCTAGCAAAGCGTGCTACATATATGGAATTTAACGATGTTTTGAAGTCCACAAGAA CGCAGTTAGAGCGTGAGCTTGCTCTTGAAGACATCTCCAGGGTGAAAGATTTACCTTCTTACAACATGTTGAGAGATGAT TAG
Protein sequence (LotjaGi1g1v0651900.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSSRTLRRRLHHGDVDGKRQEHLEASGLDALSEPLLGGDDYIENKKICTLEDIWDDERKKAQFHWTFLFSNLIAQWAQWL ANIVLGSGSLIGRLLSVSSTALYLQNNRMLPQPLTPLQEERLRNLRQRLEVPFDGSKTEHQDALKQLWKLAFPDREIPPL KSDLWKEMGWQGSDPSTDFRGGGYISLENLIFFAQKYPGSFQRLLHKQDGARAEWEYPFAVAGINISFMLAQMLDLQAGY PSSLSGFRFLQLLEEDEMAFDILYCVAYQMMDAQWLAKRATYMEFNDVLKSTRTQLERELALEDISRVKDLPSYNMLRDD
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 318 | 318 | 1.0E-129 | – | |
| PANTHER | 1 | 318 | 318 | 1.0E-129 | – | |
| Pfam | 124 | 289 | 166 | 2.1E-47 | ||
| ProSiteProfiles | 139 | 300 | 162 | 29.327 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi1g1v0651900.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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