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LotjaGi1g1v0659200.3

Overview

Field Value
Gene ID LotjaGi1g1v0659200
Transcript ID LotjaGi1g1v0659200.3
Related isoforms 3
Lotus japonicus genome version Gifu v1.2
Description Stomatal closure-related actin-binding protein 1; TAIR: AT2G40820.1 stomatal closure actin-binding-like protein; Swiss-Prot: sp|F4IIZ9|SCAB2_ARATH Stomatal closure-related actin-binding protein 2; TrEMBL-Plants: tr|A0A151RLC8|A0A151RLC8_CAJCA Uncharacterized protein; Found in the gene: LotjaGi1g1v0659200
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr1:121984996..121992373) extracted from Lotus japonicus Gifu genome v1.2.

TTTGACTCATTGATGAATTTTCTTAACTGACGATCTCATACTGTATTGCATTTTTTACCAGGCCACATCCATTTTCACCA TGACAAAGATTAGTCCTGAAATTGAAATCAAGATGCCAATGGAAGCAGTTCCGCCAGTTTCAGCTGATGTGAGCTTTATT TCTGATAGGTTTCCAAAGTATAAACTTGGAGCTGATAGCCAAATTCTGGAAGAGACTGTAGAAGATAACCAGGGTCCTTC ATTGAAGGATGTTATTGAACAAGAAGCTACCAATTTGTCAGACCAGCACAAGCGCATCTCAGTTCGTGACCTTGCCTGTA AATTTGATAAGAACTTGGCTGCAGCTGCTAAGTTGTCTAATGAGGTTCCTATCATTTATATTTTCTTATGTTCACTATAT TGGTTTTTTTCCTTTCCTTAATAGAGAAAGCCAATTTCGATTCAACAGCCCAAGTTCTATTCACATTGATCTCTTTGCAG TTGAAATAAAGTTTGTTAATGACTTTGATTTGCAGTTCCTTAGCTTCTTTTTTTGCACATTTAGGACATTAGTTCTTCTC AACTTCTGGTGATATATTGCTTTTTCATGGTATTCAGGCAAAGATAAGAGAGGTGGCATCTTTGGAGGGACATGTTCTTT TGAAGAAGCTAAGAGATGCTTTAGAATATTTAAGAGTCCGTTTTGCAGGAAGAAATAAAGAGGATGTGGAGAAAGCTATC TCTATGGTTTGTTATTTAAAATTACTCCATTGTTGAGTGCCTGACTTCATTCAAAGTTTAAAATGGCATTTTATTTTCAG ATATTTGAGCTTTTGGGCCAACAGCCACTTTTATGGAGCATACCTACTATTTTTTTTCTTTCTTTTTTCATATATTTCTT GGAGACTGCATAAGGAAATTCTTTGTTTCTTCTTCTTCAATTCATGTTGCATCAACTAAACAATGTATTTCTCACAGGTT GAAGCTTTAGCAGTAAAGTTGACTCAAAATGAAGGAGAATTGATTCAAGAGAAATTTGAAGTGAAGAAGCTTTTGAACTT TCTCAAACAGGTCTTCTTTGACATCTTTACTTTTTGTAAATGGTTATATAATCTCCATCAAAACTTTCTGCTAACTATTA TGATTTACTGGAACAGTTTCTAAATTTTCAATACTAATGCTTTGTTCAAATTCTAATATTTTATTTGAATATTTTTTTAT GATTATAAAACAATGATTAGACAGTTCATACTATTCAAATTGTATTGTGTAACTTGGTGAAGGCATCAAAATCTCATAGG AAGTTTTTCCCATTCACTGTCACCTTCAATAAAATCATCACTCGTTCCTTTTAGAACAGGTTTTTGCCTTCACATTTTAT CTATTGAAATTGGTCATTCTGAAAACTATTTTCTCTAATTTTTATGCTCTTTTATAATATATTACAACAACAATGATATA TTCACTAGAAGTACTAGTATTTTGTTCAGATGCTGCTTCCCATCATAATTTTATTCCTTCTCCAGGGCTTTCTGAATTAG TGTGGAATTTCTAGTTCTTCCATTTGTTTTCTAAAATAATCAAATCTGAATCCATCTTTGTTCTATAGGCTTCTGAAGAT GCTAAAAAGTTGGTTAATCAAGAGAAGTCTTTTGCTTGTGCTGAAATTGAGAGTGCTAGGTCAGTTGTGCTGAGAATTGG GGAGGCACTCGAGGAACAAGAACAAGATTCCCAAGCTTCTAAACCGCAGGTTCTAATTTGCAGTTTGATTACACAGTTAT TTGTGTGGGTGTGTATAACTTTGCATTTTACAGTTTCATAACTAAATGCTATACATTTAAACAATCTTTCATGTGTATGA GGGAATCATATGTATGAGTTACAAGAAAAATTGCTAAACATAATTTTGGGACAGATAATAGGGCTTCATTCTCTGTCTGG GGCGGCACTGCTACAAGATTACATATGTTGGAAATTCATATGAATTTAATGTCATCATTAATTAGGAAAATTCAAAGTAT AATATATGTGGAATACCTAATGCATATACCTTTTTGGTTGTTCCTCGCTGTCAGGATGTGGATGGACTAGTAGAAGAGGT TCAAGAGGCTAGAAGAATCAAACTGTTGCATCAGCCAAGCAAGGTGCATTGCATTTTGCTTCCTCAATACTGTAGTCGGC TTGTAGCTAATAATTTTAGCATAACTTCACTGCACTCCATTTTATGATGATGATGATGATTTCCAGATTTTTAGTAAAAG AATTAACACTTCTATTCTTCCAAAATATCTGTGTTGTATCTGTATCTGAATCTGAATTGGGTAGTTACTCCCTTACTAAA AAGTTAACCATTGCTAGGGTACCACTTTTTCTGCTGAACTGTGCTAAATGGGTTATTTTGATTTCGAAACATTTGACTTG CAAGCAACACATGTTTTGAAATGCATATGAATGTTATTAAATGCTGACATTTGGTTTGTATTGTGCAAAATGGGCTTAAC ATATCTACAAATATATTTCATTTTATATCAATTTTTATGTGTGTAAATATATTAGTATTCATAGCTAATACATTCTTCTA TACCTGTATTTCTAAACCTATGAAAGTTTTCATATCTATACATCATAATTTAAACAATTTTGTTCTTCGATTCTAATTTC CCATATATCACAATTTGAATTTTGTTCATAATGGTGAAATAATTGGCTTTTATGATTTACAATGATTTCAGGTTAGGGCA ATGGAGTATGAACTTCGTGCTCTAAGGGATCAAATTCGAGAAAAATCTATATTTTCAATTAAGCTTCAGAAAGAGGTTTG TTGATATATTATCAATTTGACTAGATTTGACTGTGCAGTTTTATATTTAACTTTCGTCATAGGATACAATATTAGTTTAT TTTTCTACCTCTCTTCCTACTGCACAAAGGTAAATCTAAAACATGCCAATGAGGGTTGTCCCAACTGGTAAATTGAACTC TAAAAAAAAAACTAACAAGTTTTGTGTTTTATTCTTGATGATCTGTCCTTGACAGACACAGATCATCTATAAGTAGTGCT GTAAGCTCTTACCAAGACTGGTGGCATGCCCCTAACCATGGAATGACCCTCTCCCTAAAATTTTCTTGTACTGACAAATT AATAGATTTTTACATAACTCTTAAGTTGACACTAGAAGAACAATTAAAAATCATTTTGTTTATAAGTAACTTTTAAAACA GTCAACTTAAAATATAAATTAAAAAGTTTAAACCTGAAATTATTAGTTCTGCTCACCACATTTCATCTGCGAATATTGCT CTTTCCTCAGTTCATCCTTGGGCACAAAAGATGTTTATACGAATAAATGTTGTTAAGATGAGTAGTGGGAGAAGCTAATG TTGACTGTACAATGATATATGGATGATCAAGATTAATTCCTGTCATTGTACATTTATGTGCTTTGTACACATGCACACCA ACGCAAATTGCACACATTTGCACATGCATGCACTTATGCACGGGCACAGACACACACAACATAGGTGTACAGTGTCCGGT ATCCTTTATTAAAGACATTTCCCGTGTTGGTGTATCCATGTCCTTGTCGTGTTTGGTGTCAGTGCTTAGATTATAGCTAA CATGTTTCACAAAACCTGGTTTGGTTTTTGAACATGACTCTGAGTCTCAAATGATAGTTTGAGTAGAGGTGAAAAAGTTG CTTATCGATTAGGTCAAACCATGATGTGTGAACTTTAACTAAAAAATGTTATAAAGATTAACTTTTAAGTGCCAGTATGC TATGCACAACCGTCTTTTTCTTGCAATAACTTTGTCTCCCCCATGCCAGCTAACAATGAGCAAGAGGGATGAGGAGAATA AATCTCATCCGTATATGTTACATGGTTCTGAAGCTTTGGGTTCATATCTGAAAGTCCAGCCTCGCTCGGGTGAAGTGCCA CAGGTTTCAAAATGTTCATTTCAGTGGTACCGCTTGTCATCTGAAGGAAGCTGGAGGGAAGTTATTTCAGGTACCTCTAT ATTCAAGCATGTTACAATTCAAGATTAAGTCAAATAGTCAGGATTTGGTTTAGGTAACTTTCATTCTTCCACTATCTATT TAAATCAACACACAATGTATTACAGAATAATGCATTGTCGCCCAAATTGCACTCGTATGAGTGTGTTAGAATATGAAGTC ATTCCTGGGCCTCCACACATTAGTTTAACTTTTTGGGTTCATTTGGTTTTTGACATGGTGCCAAACCCTATTTGGCCAAA TAGTTAGAAATTCAATCCTTGATAAGTCCTTTGTTTGATGTCCGTGCTTCAAAGTCCATATGGATGAAATGGTTAAATTT TAGAAATGAAACTATTCTTGAACCTCGACCTAAAAATTTAAATTTTTAAGGGAGTTGGATTATTTGTTTAATTAGATGTG ATGCAGGGTCTCAAAATATTGGTTAATATGGGTTAACAAGTTCATATGGACTATCAGGTTTTTTATTCAACAGCTTTACG GTTAGGTAGTGCTGAAATGCTGAAATGCTGTTATCAGATGTGGTTATTTCTGGAAAAAAAATTTGACATGGGAATAAGGC TAAAATCTGAAACCTGAATTCACATCACACTGAAGCTTACTTGATTCTTAATTGTGTCCTTCTAAAATCAACCTGGAAAA GATGTGCACCTCATCTTTCTTGATCCATACAATTAGCAAGGGTTTAGTTATCTGAGTAAAGTTGGCATCTTAAAATATGA ATTACTGGCATGCAATGTAAAAACTCATTAATGAATCCTACTCCCAACCAAAACTTCAGAGAAGGTAAGTGCATAAATAA GCTACACATAAATAAAAAGAGGAGGGCTCCATTTACTCCAAGAGTAACTTTAAAAAGCTACTCCACATCCTCACCCATGA GTATATTAAAAATTTAATGGCTGAGATTAATTACTAATCTCCAATCACGTGACCTTCTTTTCTTCTTGCCAAGAACTTTT TCAAGCTTCTGGTACATCATCTCTCTCTTTGATTCGCCTATTCATTGAGATGGGTTACTTCTAAAAACTAGAAATAGACC ACATCTTTTTCTCCACTCTATTCTCATTGCCTTGAACCAGAGCTTCTTTCTTTTTCAATAGCCTCAATTTAATAGCAGCG ACACCAATATTGAGGTCATACCCTTGATGACTGCGAGGAAACTCAAAAGTTGTGTTAGACCTGATATTGAATTGCTTTAT TATCAATTTTTGCACTTTGGGAACTATTTGTAAAACTTAATTTTATTATGCTTCCAATGGAAGCCTTTCATTGTAGCCAC AATTTTAAGTTCATGTAAGTGTCAAATTGCTAGTTACAAAACCCTAATTAAATAATTGATACTTAAAGAGGGTAAAACAA GATAATTGATACCTACGCAGGTTCTCAATGGTGTTGACACTTGACGCTGCTATGGGATTGGTGGCGGTGACAAAGAAAGG ATTGGTGGTGATGATAAAAGAAAGTAATTGTGGATCAAGTTATGAGAATGGAGAGGGAGAGACAGAGGTAGAGAGTTGAG GTGCTGGAAGCTTAGAAAAAAGATCACGTGAGAAGTGATTAACAATTAATCTGAACCAATAAATTTTAATACAATCAAGG GTGAGGATGTGGAGTAGCTTTTTAAAGTTACTCTTGGAGTAAATGGAGCCCTCCTCAAATAAAAATTATAAAATTTAAAT ATACCTGGTAGTACTATCCAGAGCTTCATAGCAGGACAAACTTATATGATCATGAGGCTTTGTTTCATCATAGTTTGTTA CAGTAACCTATAATTTTTTTTTTGTACTTTTTTTTCTTTTATAGGCACTTGCTAAATTTTGTCCTCTACCTGCCACATTT GGCTCCTATTAATTCATTGACTCAAAAAAAATGTAATGAACCTTCAGTAACGATTTCACTAATGTGTGGCTCCAATCTGG AATACTGAAATTATATTTATACCTGTACCATTCATAATGAATATTGCCTTCTTTATATTATTTAAATTTGTTTATCCTGC TCTTTGCTTGGCCGGGCTTCAATAGCTAACTAATTGTCTTGATCACTATCATTATTGTTATATTGTTTGAAGTTGGTTTG TCTTTATTTATCAGGTGCCGACAAATCAATATATGCTCCTGACCCCTTTGACGTTGGGAGAATCTTACAAGTGGACATTG TCTCTAATGGCAAAAAACTCACACTAACTACTAATCCCATTCAAACTGGTTAGCTTTTGTTATGGTCCATTATTTCTGAT TTTGGCTTGGATAATTGGATTTACCTATTGATGCATCCAGTTGTTTAAAAAGAAAGGCTAACAGCTACCTATCTTGTGTG TATCAGCTTCAGGACTTGGAAGCCATGTGGAGGCACTTCTACGAAAATCTAATACTGATTTTCATGTATGTTATCTACAC TCCATTTAGATTCAGTTATATTTGAGCCGGCTTATGTGATTAAAGTTCAAAATGTTAATTTTAAATAATGGGTGCTTACT GAAGAGAAAGTTTTGCTTGAGGTAATGTAATGGACATTTGGCACAATAATTCTTACAAAGTTTGCACATGGTGTTATGTA GGTGGTTATCTCTCAGATGAATGGAAAAGATCACTCATCACGTTCTACTCATTCATTTAATGTGGGGAGAATGAGGATAA AGCTATGTAGAGGTTGGATTACAAAAGCTAGAGAGATTTACTCCCCATCAATGCAGGTAACATTTTGACAATTGACCTTC ATTCTTGTGTCCTAAACATGTTAAACATCAAGGATAAAAGGCTCTCTGCCCTAAACACGCTAGTGTGTTTGGATCAACTT ATCTTTTCTCAGAATCAATTTTGAAACCCAAAAGATACTCATAGAAGCTTCTCCCCAGAATTGACTATTGCTTTAGAATC TATTGTAGAAGGATTTCCAAACATGCACTAACACACTGGTACTAACAGTTTTGTTGTCAAGTTCTTACTCCTTTAGATTC TATATTCTACAAAGAATAACAACTTTTAATTAAAGTGCACCCTTGAGTACTTTACTTTTTTTTTTCTATCTTTAAAGTTC TCTATTTGACTATGTCCATTACACTAACATTTTTATTTAACTAAAGCTATGTGGAGTTAGAGGGGATGCCAGCAATGCAG CGAAGGCACTGTTTTGGCAAGCTCGAAAGGGCCTATCATTTGTGTTAACCTTTGAATCAGAGAAAGAAAGAAATGTAGCC ATCATGATTGCCAGAAAATATGCTCTTGATTGCAATGTATGCATCTCTCTCTTCCCTAATTATATATATACTGATTTATA TACTGGCTTTCTTGTCTAATTTATCGGATCAAGATCCTCTCATGTGAAAACTTTACGTTTTTTTTATCAGCATGAAAACT TTACATGATACTCTCATG 

CDS sequence (LotjaGi1g1v0659200.3) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGACAAAGATTAGTCCTGAAATTGAAATCAAGATGCCAATGGAAGCAGTTCCGCCAGTTTCAGCTGATGTGAGCTTTAT TTCTGATAGGTTTCCAAAGTATAAACTTGGAGCTGATAGCCAAATTCTGGAAGAGACTGTAGAAGATAACCAGGGTCCTT CATTGAAGGATGTTATTGAACAAGAAGCTACCAATTTGTCAGACCAGCACAAGCGCATCTCAGTTCGTGACCTTGCCTGT AAATTTGATAAGAACTTGGCTGCAGCTGCTAAGTTGTCTAATGAGGCAAAGATAAGAGAGGTGGCATCTTTGGAGGGACA TGTTCTTTTGAAGAAGCTAAGAGATGCTTTAGAATATTTAAGAGTCCGTTTTGCAGGAAGAAATAAAGAGGATGTGGAGA AAGCTATCTCTATGGTTGAAGCTTTAGCAGTAAAGTTGACTCAAAATGAAGGAGAATTGATTCAAGAGAAATTTGAAGTG AAGAAGCTTTTGAACTTTCTCAAACAGGCTTCTGAAGATGCTAAAAAGTTGGTTAATCAAGAGAAGTCTTTTGCTTGTGC TGAAATTGAGAGTGCTAGGTCAGTTGTGCTGAGAATTGGGGAGGCACTCGAGGAACAAGAACAAGATTCCCAAGCTTCTA AACCGCAGGATGTGGATGGACTAGTAGAAGAGGTTCAAGAGGCTAGAAGAATCAAACTGTTGCATCAGCCAAGCAAGGTT AGGGCAATGGAGTATGAACTTCGTGCTCTAAGGGATCAAATTCGAGAAAAATCTATATTTTCAATTAAGCTTCAGAAAGA GCTAACAATGAGCAAGAGGGATGAGGAGAATAAATCTCATCCGTATATGTTACATGGTTCTGAAGCTTTGGGTTCATATC TGAAAGTCCAGCCTCGCTCGGGTGAAGTGCCACAGGTTTCAAAATGTTCATTTCAGTGGTACCGCTTGTCATCTGAAGGA AGCTGGAGGGAAGTTATTTCAGGTGCCGACAAATCAATATATGCTCCTGACCCCTTTGACGTTGGGAGAATCTTACAAGT GGACATTGTCTCTAATGGCAAAAAACTCACACTAACTACTAATCCCATTCAAACTGCTTCAGGACTTGGAAGCCATGTGG AGGCACTTCTACGAAAATCTAATACTGATTTTCATGTGGTTATCTCTCAGATGAATGGAAAAGATCACTCATCACGTTCT ACTCATTCATTTAATGTGGGGAGAATGAGGATAAAGCTATGTAGAGGTTGGATTACAAAAGCTAGAGAGATTTACTCCCC ATCAATGCAGCTATGTGGAGTTAGAGGGGATGCCAGCAATGCAGCGAAGGCACTGTTTTGGCAAGCTCGAAAGGGCCTAT CATTTGTGTTAACCTTTGAATCAGAGAAAGAAAGAAATGTAGCCATCATGATTGCCAGAAAATATGCTCTTGATTGCAAT CATGAAAACTTTACATGA 

Protein sequence (LotjaGi1g1v0659200.3) extracted from Lotus japonicus Gifu v1.2 Proteins.

MTKISPEIEIKMPMEAVPPVSADVSFISDRFPKYKLGADSQILEETVEDNQGPSLKDVIEQEATNLSDQHKRISVRDLAC KFDKNLAAAAKLSNEAKIREVASLEGHVLLKKLRDALEYLRVRFAGRNKEDVEKAISMVEALAVKLTQNEGELIQEKFEV KKLLNFLKQASEDAKKLVNQEKSFACAEIESARSVVLRIGEALEEQEQDSQASKPQDVDGLVEEVQEARRIKLLHQPSKV RAMEYELRALRDQIREKSIFSIKLQKELTMSKRDEENKSHPYMLHGSEALGSYLKVQPRSGEVPQVSKCSFQWYRLSSEG SWREVISGADKSIYAPDPFDVGRILQVDIVSNGKKLTLTTNPIQTASGLGSHVEALLRKSNTDFHVVISQMNGKDHSSRS THSFNVGRMRIKLCRGWITKAREIYSPSMQLCGVRGDASNAAKALFWQARKGLSFVLTFESEKERNVAIMIARKYALDCN HENFT 

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER 1 480 480 1.4E-270
PANTHER 1 480 480 1.4E-270
Pfam 55 97 43 6.7E-25
Gene3D 101 152 52 9.8E-28
Pfam 101 268 168 1.3E-75
Coils 160 180 21 -
Gene3D 269 364 96 7.6E-34
Pfam 282 378 97 4.3E-42
Gene3D 366 482 117 1.2E-56
Pfam 381 480 100 2.9E-52

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
Molecular function Actin binding Interacting selectively and non-covalently with monomeric or multimeric forms of actin, including actin filaments.
Biological process Actin filament organization A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments. Includes processes that control the spatial distribution of actin filaments, such as organizing filaments into meshworks, bundles, or other structures, as by cross-linking.
Biological process Regulation of stomatal movement Any process that modulates the frequency, rate or extent of stomatal movement.

Expression data

Expression pattern

Expression pattern of LotjaGi1g1v0659200.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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