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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0659200 |
| Transcript ID | LotjaGi1g1v0659200.4 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Stomatal closure-related actin-binding protein 1; TAIR: AT2G40820.4 stomatal closure actin-binding-like protein; Swiss-Prot: sp|F4IIZ9|SCAB2_ARATH Stomatal closure-related actin-binding protein 2; TrEMBL-Plants: tr|A0A151RLC8|A0A151RLC8_CAJCA Uncharacterized protein; Found in the gene: LotjaGi1g1v0659200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:121985075..121992351) extracted from Lotus japonicus Gifu genome v1.2.
TTAACTGACGATCTCATACTGTATTGCATTTTTTACCAGGCCACATCCATTTTCACCATGACAAAGATTAGTCCTGAAAT TGAAATCAAGATGCCAATGGAAGCAGTTCCGCCAGTTTCAGCTGATGTGAGCTTTATTTCTGATAGGTTTCCAAAGTATA AACTTGGAGCTGATAGCCAAATTCTGGAAGAGACTGTAGAAGATAACCAGGGTCCTTCATTGAAGGATGTTATTGAACAA GAAGCTACCAATTTGTCAGACCAGCACAAGCGCATCTCAGTTCGTGACCTTGCCTGTAAATTTGATAAGAACTTGGCTGC AGCTGCTAAGTTGTCTAATGAGGTTCCTATCATTTATATTTTCTTATGTTCACTATATTGGTTTTTTTCCTTTCCTTAAT AGAGAAAGCCAATTTCGATTCAACAGCCCAAGTTCTATTCACATTGATCTCTTTGCAGTTGAAATAAAGTTTGTTAATGA CTTTGATTTGCAGTTCCTTAGCTTCTTTTTTTGCACATTTAGGACATTAGTTCTTCTCAACTTCTGGTGATATATTGCTT TTTCATGGTATTCAGGCAAAGATAAGAGAGGTGGCATCTTTGGAGGGACATGTTCTTTTGAAGAAGCTAAGAGATGCTTT AGAATATTTAAGAGTCCGTTTTGCAGGAAGAAATAAAGAGGATGTGGAGAAAGCTATCTCTATGGTTTGTTATTTAAAAT TACTCCATTGTTGAGTGCCTGACTTCATTCAAAGTTTAAAATGGCATTTTATTTTCAGATATTTGAGCTTTTGGGCCAAC AGCCACTTTTATGGAGCATACCTACTATTTTTTTTCTTTCTTTTTTCATATATTTCTTGGAGACTGCATAAGGAAATTCT TTGTTTCTTCTTCTTCAATTCATGTTGCATCAACTAAACAATGTATTTCTCACAGGTTGAAGCTTTAGCAGTAAAGTTGA CTCAAAATGAAGGAGAATTGATTCAAGAGAAATTTGAAGTGAAGAAGCTTTTGAACTTTCTCAAACAGGTCTTCTTTGAC ATCTTTACTTTTTGTAAATGGTTATATAATCTCCATCAAAACTTTCTGCTAACTATTATGATTTACTGGAACAGTTTCTA AATTTTCAATACTAATGCTTTGTTCAAATTCTAATATTTTATTTGAATATTTTTTTATGATTATAAAACAATGATTAGAC AGTTCATACTATTCAAATTGTATTGTGTAACTTGGTGAAGGCATCAAAATCTCATAGGAAGTTTTTCCCATTCACTGTCA CCTTCAATAAAATCATCACTCGTTCCTTTTAGAACAGGTTTTTGCCTTCACATTTTATCTATTGAAATTGGTCATTCTGA AAACTATTTTCTCTAATTTTTATGCTCTTTTATAATATATTACAACAACAATGATATATTCACTAGAAGTACTAGTATTT TGTTCAGATGCTGCTTCCCATCATAATTTTATTCCTTCTCCAGGGCTTTCTGAATTAGTGTGGAATTTCTAGTTCTTCCA TTTGTTTTCTAAAATAATCAAATCTGAATCCATCTTTGTTCTATAGGCTTCTGAAGATGCTAAAAAGTTGGTTAATCAAG AGAAGTCTTTTGCTTGTGCTGAAATTGAGAGTGCTAGGTCAGTTGTGCTGAGAATTGGGGAGGCACTCGAGGAACAAGAA CAAGATTCCCAAGCTTCTAAACCGCAGGTTCTAATTTGCAGTTTGATTACACAGTTATTTGTGTGGGTGTGTATAACTTT GCATTTTACAGTTTCATAACTAAATGCTATACATTTAAACAATCTTTCATGTGTATGAGGGAATCATATGTATGAGTTAC AAGAAAAATTGCTAAACATAATTTTGGGACAGATAATAGGGCTTCATTCTCTGTCTGGGGCGGCACTGCTACAAGATTAC ATATGTTGGAAATTCATATGAATTTAATGTCATCATTAATTAGGAAAATTCAAAGTATAATATATGTGGAATACCTAATG CATATACCTTTTTGGTTGTTCCTCGCTGTCAGGATGTGGATGGACTAGTAGAAGAGGTTCAAGAGGCTAGAAGAATCAAA CTGTTGCATCAGCCAAGCAAGGTGCATTGCATTTTGCTTCCTCAATACTGTAGTCGGCTTGTAGCTAATAATTTTAGCAT AACTTCACTGCACTCCATTTTATGATGATGATGATGATTTCCAGATTTTTAGTAAAAGAATTAACACTTCTATTCTTCCA AAATATCTGTGTTGTATCTGTATCTGAATCTGAATTGGGTAGTTACTCCCTTACTAAAAAGTTAACCATTGCTAGGGTAC CACTTTTTCTGCTGAACTGTGCTAAATGGGTTATTTTGATTTCGAAACATTTGACTTGCAAGCAACACATGTTTTGAAAT GCATATGAATGTTATTAAATGCTGACATTTGGTTTGTATTGTGCAAAATGGGCTTAACATATCTACAAATATATTTCATT TTATATCAATTTTTATGTGTGTAAATATATTAGTATTCATAGCTAATACATTCTTCTATACCTGTATTTCTAAACCTATG AAAGTTTTCATATCTATACATCATAATTTAAACAATTTTGTTCTTCGATTCTAATTTCCCATATATCACAATTTGAATTT TGTTCATAATGGTGAAATAATTGGCTTTTATGATTTACAATGATTTCAGGTTAGGGCAATGGAGTATGAACTTCGTGCTC TAAGGGATCAAATTCGAGAAAAATCTATATTTTCAATTAAGCTTCAGAAAGAGGTTTGTTGATATATTATCAATTTGACT AGATTTGACTGTGCAGTTTTATATTTAACTTTCGTCATAGGATACAATATTAGTTTATTTTTCTACCTCTCTTCCTACTG CACAAAGGTAAATCTAAAACATGCCAATGAGGGTTGTCCCAACTGGTAAATTGAACTCTAAAAAAAAAACTAACAAGTTT TGTGTTTTATTCTTGATGATCTGTCCTTGACAGACACAGATCATCTATAAGTAGTGCTGTAAGCTCTTACCAAGACTGGT GGCATGCCCCTAACCATGGAATGACCCTCTCCCTAAAATTTTCTTGTACTGACAAATTAATAGATTTTTACATAACTCTT AAGTTGACACTAGAAGAACAATTAAAAATCATTTTGTTTATAAGTAACTTTTAAAACAGTCAACTTAAAATATAAATTAA AAAGTTTAAACCTGAAATTATTAGTTCTGCTCACCACATTTCATCTGCGAATATTGCTCTTTCCTCAGTTCATCCTTGGG CACAAAAGATGTTTATACGAATAAATGTTGTTAAGATGAGTAGTGGGAGAAGCTAATGTTGACTGTACAATGATATATGG ATGATCAAGATTAATTCCTGTCATTGTACATTTATGTGCTTTGTACACATGCACACCAACGCAAATTGCACACATTTGCA CATGCATGCACTTATGCACGGGCACAGACACACACAACATAGGTGTACAGTGTCCGGTATCCTTTATTAAAGACATTTCC CGTGTTGGTGTATCCATGTCCTTGTCGTGTTTGGTGTCAGTGCTTAGATTATAGCTAACATGTTTCACAAAACCTGGTTT GGTTTTTGAACATGACTCTGAGTCTCAAATGATAGTTTGAGTAGAGGTGAAAAAGTTGCTTATCGATTAGGTCAAACCAT GATGTGTGAACTTTAACTAAAAAATGTTATAAAGATTAACTTTTAAGTGCCAGTATGCTATGCACAACCGTCTTTTTCTT GCAATAACTTTGTCTCCCCCATGCCAGCTAACAATGAGCAAGAGGGATGAGGAGAATAAATCTCATCCGTATATGTTACA TGGTTCTGAAGCTTTGGGTTCATATCTGAAAGTCCAGCCTCGCTCGGGTGAAGTGCCACAGGTTTCAAAATGTTCATTTC AGTGGTACCGCTTGTCATCTGAAGGAAGCTGGAGGGAAGTTATTTCAGGTACCTCTATATTCAAGCATGTTACAATTCAA GATTAAGTCAAATAGTCAGGATTTGGTTTAGGTAACTTTCATTCTTCCACTATCTATTTAAATCAACACACAATGTATTA CAGAATAATGCATTGTCGCCCAAATTGCACTCGTATGAGTGTGTTAGAATATGAAGTCATTCCTGGGCCTCCACACATTA GTTTAACTTTTTGGGTTCATTTGGTTTTTGACATGGTGCCAAACCCTATTTGGCCAAATAGTTAGAAATTCAATCCTTGA TAAGTCCTTTGTTTGATGTCCGTGCTTCAAAGTCCATATGGATGAAATGGTTAAATTTTAGAAATGAAACTATTCTTGAA CCTCGACCTAAAAATTTAAATTTTTAAGGGAGTTGGATTATTTGTTTAATTAGATGTGATGCAGGGTCTCAAAATATTGG TTAATATGGGTTAACAAGTTCATATGGACTATCAGGTTTTTTATTCAACAGCTTTACGGTTAGGTAGTGCTGAAATGCTG AAATGCTGTTATCAGATGTGGTTATTTCTGGAAAAAAAATTTGACATGGGAATAAGGCTAAAATCTGAAACCTGAATTCA CATCACACTGAAGCTTACTTGATTCTTAATTGTGTCCTTCTAAAATCAACCTGGAAAAGATGTGCACCTCATCTTTCTTG ATCCATACAATTAGCAAGGGTTTAGTTATCTGAGTAAAGTTGGCATCTTAAAATATGAATTACTGGCATGCAATGTAAAA ACTCATTAATGAATCCTACTCCCAACCAAAACTTCAGAGAAGGTAAGTGCATAAATAAGCTACACATAAATAAAAAGAGG AGGGCTCCATTTACTCCAAGAGTAACTTTAAAAAGCTACTCCACATCCTCACCCATGAGTATATTAAAAATTTAATGGCT GAGATTAATTACTAATCTCCAATCACGTGACCTTCTTTTCTTCTTGCCAAGAACTTTTTCAAGCTTCTGGTACATCATCT CTCTCTTTGATTCGCCTATTCATTGAGATGGGTTACTTCTAAAAACTAGAAATAGACCACATCTTTTTCTCCACTCTATT CTCATTGCCTTGAACCAGAGCTTCTTTCTTTTTCAATAGCCTCAATTTAATAGCAGCGACACCAATATTGAGGTCATACC CTTGATGACTGCGAGGAAACTCAAAAGTTGTGTTAGACCTGATATTGAATTGCTTTATTATCAATTTTTGCACTTTGGGA ACTATTTGTAAAACTTAATTTTATTATGCTTCCAATGGAAGCCTTTCATTGTAGCCACAATTTTAAGTTCATGTAAGTGT CAAATTGCTAGTTACAAAACCCTAATTAAATAATTGATACTTAAAGAGGGTAAAACAAGATAATTGATACCTACGCAGGT TCTCAATGGTGTTGACACTTGACGCTGCTATGGGATTGGTGGCGGTGACAAAGAAAGGATTGGTGGTGATGATAAAAGAA AGTAATTGTGGATCAAGTTATGAGAATGGAGAGGGAGAGACAGAGGTAGAGAGTTGAGGTGCTGGAAGCTTAGAAAAAAG ATCACGTGAGAAGTGATTAACAATTAATCTGAACCAATAAATTTTAATACAATCAAGGGTGAGGATGTGGAGTAGCTTTT TAAAGTTACTCTTGGAGTAAATGGAGCCCTCCTCAAATAAAAATTATAAAATTTAAATATACCTGGTAGTACTATCCAGA GCTTCATAGCAGGACAAACTTATATGATCATGAGGCTTTGTTTCATCATAGTTTGTTACAGTAACCTATAATTTTTTTTT TGTACTTTTTTTTCTTTTATAGGCACTTGCTAAATTTTGTCCTCTACCTGCCACATTTGGCTCCTATTAATTCATTGACT CAAAAAAAATGTAATGAACCTTCAGTAACGATTTCACTAATGTGTGGCTCCAATCTGGAATACTGAAATTATATTTATAC CTGTACCATTCATAATGAATATTGCCTTCTTTATATTATTTAAATTTGTTTATCCTGCTCTTTGCTTGGCCGGGCTTCAA TAGCTAACTAATTGTCTTGATCACTATCATTATTGTTATATTGTTTGAAGTTGGTTTGTCTTTATTTATCAGGTGCCGAC AAATCAATATATGCTCCTGACCCCTTTGACGTTGGGAGAATCTTACAAGTGGACATTGTCTCTAATGGCAAAAAACTCAC ACTAACTACTAATCCCATTCAAACTGGTTAGCTTTTGTTATGGTCCATTATTTCTGATTTTGGCTTGGATAATTGGATTT ACCTATTGATGCATCCAGTTGTTTAAAAAGAAAGGCTAACAGCTACCTATCTTGTGTGTATCAGCTTCAGGACTTGGAAG CCATGTGGAGGCACTTCTACGAAAATCTAATACTGATTTTCATGTATGTTATCTACACTCCATTTAGATTCAGTTATATT TGAGCCGGCTTATGTGATTAAAGTTCAAAATGTTAATTTTAAATAATGGGTGCTTACTGAAGAGAAAGTTTTGCTTGAGG TAATGTAATGGACATTTGGCACAATAATTCTTACAAAGTTTGCACATGGTGTTATGTAGGTGGTTATCTCTCAGATGAAT GGAAAAGATCACTCATCACGTTCTACTCATTCATTTAATGTGGGGAGAATGAGGATAAAGCTATGTAGAGGTTGGATTAC AAAAGCTAGAGAGATTTACTCCCCATCAATGCAGGTAACATTTTGACAATTGACCTTCATTCTTGTGTCCTAAACATGTT AAACATCAAGGATAAAAGGCTCTCTGCCCTAAACACGCTAGTGTGTTTGGATCAACTTATCTTTTCTCAGAATCAATTTT GAAACCCAAAAGATACTCATAGAAGCTTCTCCCCAGAATTGACTATTGCTTTAGAATCTATTGTAGAAGGATTTCCAAAC ATGCACTAACACACTGGTACTAACAGTTTTGTTGTCAAGTTCTTACTCCTTTAGATTCTATATTCTACAAAGAATAACAA CTTTTAATTAAAGTGCACCCTTGAGTACTTTACTTTTTTTTTTCTATCTTTAAAGTTCTCTATTTGACTATGTCCATTAC ACTAACATTTTTATTTAACTAAAGCTATGTGGAGTTAGAGGGGATGCCAGCAATGCAGCGAAGGCACTGTTTTGGCAAGC TCGAAAGGGCCTATCATTTGTGTTAACCTTTGAATCAGAGAAAGAAAGAAATGTAGCCATCATGATTGCCAGAAAATATG CTCTTGATTGCAATGTATGCATCTCTCTCTTCCCTAATTATATATATACTGATTTATATACTGGCTTTCTTGTCTAA
CDS sequence (LotjaGi1g1v0659200.4) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGACAAAGATTAGTCCTGAAATTGAAATCAAGATGCCAATGGAAGCAGTTCCGCCAGTTTCAGCTGATGTGAGCTTTAT TTCTGATAGGTTTCCAAAGTATAAACTTGGAGCTGATAGCCAAATTCTGGAAGAGACTGTAGAAGATAACCAGGGTCCTT CATTGAAGGATGTTATTGAACAAGAAGCTACCAATTTGTCAGACCAGCACAAGCGCATCTCAGTTCGTGACCTTGCCTGT AAATTTGATAAGAACTTGGCTGCAGCTGCTAAGTTGTCTAATGAGGCAAAGATAAGAGAGGTGGCATCTTTGGAGGGACA TGTTCTTTTGAAGAAGCTAAGAGATGCTTTAGAATATTTAAGAGTCCGTTTTGCAGGAAGAAATAAAGAGGATGTGGAGA AAGCTATCTCTATGGTTGAAGCTTTAGCAGTAAAGTTGACTCAAAATGAAGGAGAATTGATTCAAGAGAAATTTGAAGTG AAGAAGCTTTTGAACTTTCTCAAACAGGCTTCTGAAGATGCTAAAAAGTTGGTTAATCAAGAGAAGTCTTTTGCTTGTGC TGAAATTGAGAGTGCTAGGTCAGTTGTGCTGAGAATTGGGGAGGCACTCGAGGAACAAGAACAAGATTCCCAAGCTTCTA AACCGCAGGATGTGGATGGACTAGTAGAAGAGGTTCAAGAGGCTAGAAGAATCAAACTGTTGCATCAGCCAAGCAAGGTT AGGGCAATGGAGTATGAACTTCGTGCTCTAAGGGATCAAATTCGAGAAAAATCTATATTTTCAATTAAGCTTCAGAAAGA GCTAACAATGAGCAAGAGGGATGAGGAGAATAAATCTCATCCGTATATGTTACATGGTTCTGAAGCTTTGGGTTCATATC TGAAAGTCCAGCCTCGCTCGGGTGAAGTGCCACAGGTTTCAAAATGTTCATTTCAGTGGTACCGCTTGTCATCTGAAGGA AGCTGGAGGGAAGTTATTTCAGGTGCCGACAAATCAATATATGCTCCTGACCCCTTTGACGTTGGGAGAATCTTACAAGT GGACATTGTCTCTAATGGCAAAAAACTCACACTAACTACTAATCCCATTCAAACTGGACTTGGAAGCCATGTGGAGGCAC TTCTACGAAAATCTAATACTGATTTTCATGTGGTTATCTCTCAGATGAATGGAAAAGATCACTCATCACGTTCTACTCAT TCATTTAATGTGGGGAGAATGAGGATAAAGCTATGTAGAGGTTGGATTACAAAAGCTAGAGAGATTTACTCCCCATCAAT GCAGCTATGTGGAGTTAGAGGGGATGCCAGCAATGCAGCGAAGGCACTGTTTTGGCAAGCTCGAAAGGGCCTATCATTTG TGTTAACCTTTGAATCAGAGAAAGAAAGAAATGTAGCCATCATGATTGCCAGAAAATATGCTCTTGATTGCAATGTATGC ATCTCTCTCTTCCCTAATTATATATATACTGATTTATATACTGGCTTTCTTGTCTAA
Protein sequence (LotjaGi1g1v0659200.4) extracted from Lotus japonicus Gifu v1.2 Proteins.
MTKISPEIEIKMPMEAVPPVSADVSFISDRFPKYKLGADSQILEETVEDNQGPSLKDVIEQEATNLSDQHKRISVRDLAC KFDKNLAAAAKLSNEAKIREVASLEGHVLLKKLRDALEYLRVRFAGRNKEDVEKAISMVEALAVKLTQNEGELIQEKFEV KKLLNFLKQASEDAKKLVNQEKSFACAEIESARSVVLRIGEALEEQEQDSQASKPQDVDGLVEEVQEARRIKLLHQPSKV RAMEYELRALRDQIREKSIFSIKLQKELTMSKRDEENKSHPYMLHGSEALGSYLKVQPRSGEVPQVSKCSFQWYRLSSEG SWREVISGADKSIYAPDPFDVGRILQVDIVSNGKKLTLTTNPIQTGLGSHVEALLRKSNTDFHVVISQMNGKDHSSRSTH SFNVGRMRIKLCRGWITKAREIYSPSMQLCGVRGDASNAAKALFWQARKGLSFVLTFESEKERNVAIMIARKYALDCNVC ISLFPNYIYTDLYTGFLV
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 481 | 481 | 1.7E-269 | – | |
| PANTHER | 1 | 481 | 481 | 1.7E-269 | ||
| Pfam | 55 | 97 | 43 | 6.9E-25 | ||
| Gene3D | 101 | 152 | 52 | 1.0E-27 | – | |
| Pfam | 101 | 268 | 168 | 1.4E-75 | ||
| Coils | 160 | 180 | 21 | - | – | |
| Gene3D | 269 | 364 | 96 | 7.9E-34 | – | |
| Pfam | 282 | 376 | 95 | 7.0E-39 | – | |
| Gene3D | 365 | 486 | 122 | 1.8E-57 | – | |
| Pfam | 379 | 481 | 103 | 1.4E-53 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Actin binding | Interacting selectively and non-covalently with monomeric or multimeric forms of actin, including actin filaments. | ||
| Biological process | Actin filament organization | A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments. Includes processes that control the spatial distribution of actin filaments, such as organizing filaments into meshworks, bundles, or other structures, as by cross-linking. | ||
| Biological process | Regulation of stomatal movement | Any process that modulates the frequency, rate or extent of stomatal movement. |
Expression pattern of LotjaGi1g1v0659200.4, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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