Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

LotjaGi1g1v0665200.1

Overview

Field Value
Gene ID LotjaGi1g1v0665200
Transcript ID LotjaGi1g1v0665200.1
Lotus japonicus genome version Gifu v1.2
Description Inorganic pyrophosphatase; TAIR: AT5G09650.1 pyrophosphorylase 6; Swiss-Prot: sp|Q9LXC9|IPYR6_ARATH Soluble inorganic pyrophosphatase 6, chloroplastic; TrEMBL-Plants: tr|I3SKT1|I3SKT1_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0665200
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr1:122728827..122734496) extracted from Lotus japonicus Gifu genome v1.2.

GGTTTCTCAAGGTATTCCTACCGCCGACACCATGAGACTAATCTTTCGAGGCTCTAAAATCACGTTAAGTGGGTAGGCAT CTCCCAACAAATGCAGAAAAGACTAAAAATGAAGATTTTTTTTTTTCATAAAGTGAAAATGACCATTTTCACATTTTATT TTATTATTTTATCATAACTAAAAAAGTGCCCATCATAAAATCTCAGAAACAAACAGTGCCACATAGAACAAAGAAAGCCT ATCAGGAAGCAACAACAACAAGAGTGTCACACTGTCACACACAACAACACTGTGTGAAGGAACAAGAGCATCATCCATGG CAGCCACCAGAGCAATAGCCATAGCCAGCAACTCCACATGCTCTCTTCTCACTAAGAGACCCTTTCTGGGTTCCCATTCC CTTTGCCTCAAGAACCTCAAGCTTTCTTCTTCTTCTAGGACTACCAGGTCTTTCACCTGCAAGGCCATCTACAACCCCCA GGTTTCGATCAAGGAGGAAGGTCAGCCACAAACCCTCGATTACAGAGTCTTTTTCGTCGATCAATCTGGTAACAAGGTAG CTCTCCTTTTCTTTTCTCACTTCTTCAATTGCAATTGTTAAGAAGGCATTGATTTTTTAATTTTTTTTGGTTTTTCGTGT ATTGTGGTGTTGGGTTTGCTTAGAATTGGAAAAATGTGATTTTGGGTCCTCTAAAGTTTCTTCCTTTTTGTATCATTGCT ATGGAATGAGGGTGTTCTGTGGCATTGGACGTGGAATTGAAAAGTAATGATTTTTCATTTCCTGAGTATTTTGATGGGAT AGTGGAAGCATTAGCAAATAAATATAGTATTGGGTGCTGGATGTCTGGTTTAATTGTAGCATTTTCTTTTAGAGATCAAT AGCTTGTTGATTTGTTTTGGGATAGTGTTAACTGTGGTGTTCACTAATTTTGATATACTTCACAAGCTGATAGAGGTATT ATGTGTGTGTTTGGTTTCATGTTTGAGGGGCATTAGGATTAATTCTCATTGACGGGAATCACTTTTAGGTGGTTATATAG ATGTTTTACAAATTACAATCGATTTAGCCAAAATAAACTATGTGGAGAAACTTGAGAGAGTAGCTTGTGTTGTGGAGATA ATGATTTTATTATTGAATTTCACAGCATTACCTTAAAGAAATAAAATTTCTCATAAACCTATCCAAACTAAATCACTTCG CTTTCAACTCACTTCTACCATAATCAATTTTACTAAAATTAATGCTATCTAGATCCAATTTGGACAATGCTGATCGAAAC ACGCACTTGTGTGTGCGTGTATTTTCCCTTTTGTTTTCATCTGGTTTCATGAAAGGAATGGAGGGTAGGTGTCAAGAAAG CTGTTACCTTCTGCATGTTCCAATCTTTACTGACACAAGAGTCAGGAGTTAGATTTACATAGTTTTTCGGTTGCTAGGAA CTGTGTAATTTTAGCTAATAAAGCTCAGTATAAATGTTTTGGCTTTTTCATCAAGAAAAAAAAAGTAACTTTTTTTAGGT TCATTCATAAAATTATGTTCCATGAATGAGTGTCATGACATTTGAGATGAGTATAGCTGTACCTACTAATAGTGATTAGT AAAATATGCAGGTTTCTCCCTGGCATGATATTCCACTGAAGTTAGGTGATGGTGTCTTCAACTTCATTGTTGAAATACCA AAAGAAACCAGTGCAAAGATGGAGGTTGCCACTGATGAGCCTTTCACTCCCATAAAACAGGATACAAAAAAGGGGAAGCT TCGATTTTACCCGTGAGAGACTACTTCAAAGCTCACACTTTTTCTTTAGTTTTTTGTATTATTAGTTTTTGGCTGGGCGC TTTTATGTTTTAATAAAAATCTATTCGCTAATCCAGCCACTAGCTTATCTTTATCAAGGGAACATTGGCAATGTACATGT CCTATTGTTTGTCTTTATTATGGATGTCCATCTATAACCAGAAATCTATGTGGGAGCTTCAATGGCTTCCTTTTGAATTA ATACCTTCTTCATGTTGTTGCACCTATAACAATTGTGGATTTTGCTCTTTTAAAGTGAAGGGTGCTCTAATAGGATAAAG CATGGAATTGTAACTATTGATGAGAAAAATTAACAGTTGAAATTTTAATAACTTCATGTTTGTTGTGCATTGCATGCACT TTACCACAACAAACCGTCAATTTTGAAATCAATTATTATCTTTACACTTTATCCTCTGAAGTGTGCCCCTAACTTTAGAA GAGCCTAATCCAACAATTGTAGCATTATGCATGCATGTCTTATTCATCTGGTTTTTGAATTATTTTTGCCCTATCTAAAA CTTCTGCTTTATTAGTGTTGCTGGATAGGTTTAGTTCCATATTTAGACTGTTCTAAAACTTGTATTTTTCTTGCTCTCCA GCTATAATATACATTGGAACTATGGCTTACTTCCCCAAACTTGGGAAGATCCATCTCTTGCAAACTCTGAAGTTGACGGA GCATTTGGAGATAATGACCCAGGTATTTGATCAGTAACAACTTTCCATGATGTTGTTTCATCCTAATTAATGCTTCTGCA AAACGTGTCTAAAATTCTTGTTAATCTGTAGTTGATGTAGTTGAGATTGGCGAAAGCCAGAGGAAAATAGGCGAGATTCT GAAGGTCAAACCATTGGCTGCATTAGCCATGATTGATGAAGGAGAACTTGATTGGAAAATAGTTGCAATTTCACTAGATG ACCCAAAAGCTTCACTCGTAAATGATATCGATGATGTTGAGAAGCATTTTCCAGTAAGATCTATTTCCTAACTAGCTAAT GATTAATTTCCTATGTCTCTTCTCTGTCATTTATTCTTTACAATTATGTTGAGCAGCTTGGGTGATTTTTGAACTGTCTG ATCCAAGCTACATACTTAAGGAAGCCAGCTTATATTATTTTACTGCAAAAATGGACTAATAAGACTTCTAAGTCAATACT TATAGTATTGATTGAACTGTTGATATTAGGGACTTAATTAGGAGGACAAGTATGCATTTCTCATATGCAATCTACAGCTA TGCTGAAGTCACTTCTGTTAAGTTGGAAATATTCTTGCTACATGTGATTCTCAATTGTCGTCATGATCAGCAACTTCATG TATTCTCTTATCTTTGGCTGTCTTCAGGGAACCCTCACTGCAATTAGGGACTGGTTCAGAGACTACAAGATACCTGATGG GAAGCCTGCTAATAAATTTGGGCTTGGCAACCAGGCTGCAAATAAGGTACTTTTACTGCATGAATCTATTTATGCAATTA TCCTAAGGAATTATTTATTCCATTTTGAACATTATGATAGACTTAGTTTACCCGTTTACATGTTCTTTTTATTGATTTGT TGGTGGTTGATGTGGTTACGAAAGTAATTATCTTTCTGGCTGTATTTTGTTTCTGTTAATAACAGTTTTTTCTGGTAGAT GGTAGTTGCCTTGATTACCACAAGGGTCAGGGGAATGGGGTAGTGTACTAGGATTATTGATGTTATAAGGGTTTCTTCTT TGTGTATGGCTGTTTTGTCTTCGCTTTAATCTATCTTAACTCAAACTTATATTTGGTGAACAGGATTATGCGCTTAAGGT CATTACAGAGACCAATGAGTCCTGGGCTAAACTTATCAAGAGATCAATTCCTGCAGGAGAGCTGTCACTTGTGTAAATGC ATTTGAGGAGTGTCAGTTGTTCTTGCCACTGCTTGCATTTTCTACAATTCTATTTATGACGTAGCGAACTCTTCTGTTGA GCTTCTTGGTTATATCTAGTGAGATCAATGCTCTTTTGGCCAGGGCCTTTAGTGCAGTGCATGCTTTGTAAAATTCAGTT TCAGTGATCATGAAGTTTATATACATTTACTATCGTATCAGAAAGATTGATTCTTTCTAGAAGATATGTTTTCTTTTGAT TCTCTCTAAAAGCTATGTTTTGTTTGTATTAGCTTGTTTAGTGAATTGTGCAGTCATTGCAGGGAACATCTTGCAGGTTA ATAACTGTGTTTTTCTGTTTTCATTAGATGTCTAACAATAGATCTATGGTTGTATTATAGATATTTGCAACCAATTAATA AATACTCCAAGAGGAAGGACCATTGCCCTCACTGATTAATTGAAGATTTGAGATTACTAATTTGAGGTGAGGTGGCAGAT TTCTTTTATTAACTTAGACAGGGGTGGCAACTTTTTTATTTTTGTATACGAGAAAGTTAAGCAACCCATTAGGGACATGA GGAAACTTCCATCAATAAGAAAACAGATTTAAGTATTGTCATGAAAAAAATTCTTGATATACTTTATTTATGATTTGATT GGTTAGCCCTTGCTCTTGAAATTTACCCATTACAACATTTCATTATCCTTTGCTGAGACTTGTGGGTACAATTAATACAA GAGGAATGCTAGCAACATCCTCTTTTTGTTACACTCTTCAGCATGCTCTTTATGATCAGTCTATTTCTTAGAAGTCAACA TATATTTTCAAAAGTAATCAATTTACAAGGCAAATATGTTGACATTTTAAAAAATGCACTAGTGATAAAGTGTATGTGTG TTGTTAGCATTCCCATTAACCCATCCTTTGCCTGAATTTGATCTGCACATGATCAAACTTTACTATGTTCTCTTGATACT GTTTTGGTCAGACCCATATCTAGAGGTGATGTAGAATTAACCATTTTGTTTTTGCAGTGCTCTATTGCCACCTTTCTTTG TCATCTGTTCTCATCCAGTAGTAACTACTGTAACAACCATTCTTCTGTATGTTTTACCTTCTTGATGCTACATTTCTTTT TAACTCAGTTCAGGTGGTAGATCTTCATGCTGGATACACAGAAATATCATTATTGAATGGAAATATTAGGAACAATTCTG ATGCATATTTTAGGATAAAAATGAATAGAAGATTTGATCTGCAGATCCAGTTACCTACTAAACATAGATCCTTTGTAATA TGAACCTGAGGAATGTATATAAAAATAACCAGCAACTAAACTAGTTGATGTAATGTATTGTCATGCATGTGTTTCTGATG CTAATTTCGCAATATTTAGTTTTCAATTAAAGTGAATGATCCTCATGGTGGAGTTCAGCATAGTGACCAAAATTTGACTA GCATTTTGACATAAATTTGAGAAAAATATATCCAGTTTGAGATTCTGACATTGTTATTTTAAGACTTAGTAGAGAGCTGA GTCATCATCATCTAAGCCATTTCCCGCTAAGTGGGGTCTGGATCCATCTAATGCCATAATGCTCTGTCATACAATAAGTT TTACAGGTAAATTATTTTCCTCTAAATCCCTCTTAAAGATTTGGCTTATAGTTTTCTTACATCTCCCTCCACCCCATAAT CATTGAATCCTCTTCCATTCAATCGACCTTCCTTATAGGTGATCCTACCGGTTTTCTCCATGCATGCCGAAACCATCTCC ATCTAAGATGAGACTCTACCATGTTCTTTACAGTAAGAGCCACCCTAACTTTCTGTGATGATGGTATTTCTAATCATATC ATGTTGTTATCACTTGTGTAACGCTTCTACTCAATGGTTATTGTCATCTGCAACACCATAGAGAAACTCGTTGTATCGAG AACAGGGCCGGTCCCGACATTTTGGAGGCCCTGGACAAATAATAAAAATGGACCCCTAATAATGTTAACG
Download Genomic Sequence

CDS sequence (LotjaGi1g1v0665200.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGCAGCCACCAGAGCAATAGCCATAGCCAGCAACTCCACATGCTCTCTTCTCACTAAGAGACCCTTTCTGGGTTCCCA TTCCCTTTGCCTCAAGAACCTCAAGCTTTCTTCTTCTTCTAGGACTACCAGGTCTTTCACCTGCAAGGCCATCTACAACC CCCAGGTTTCGATCAAGGAGGAAGGTCAGCCACAAACCCTCGATTACAGAGTCTTTTTCGTCGATCAATCTGGTAACAAG GTTTCTCCCTGGCATGATATTCCACTGAAGTTAGGTGATGGTGTCTTCAACTTCATTGTTGAAATACCAAAAGAAACCAG TGCAAAGATGGAGGTTGCCACTGATGAGCCTTTCACTCCCATAAAACAGGATACAAAAAAGGGGAAGCTTCGATTTTACC CCTATAATATACATTGGAACTATGGCTTACTTCCCCAAACTTGGGAAGATCCATCTCTTGCAAACTCTGAAGTTGACGGA GCATTTGGAGATAATGACCCAGTTGATGTAGTTGAGATTGGCGAAAGCCAGAGGAAAATAGGCGAGATTCTGAAGGTCAA ACCATTGGCTGCATTAGCCATGATTGATGAAGGAGAACTTGATTGGAAAATAGTTGCAATTTCACTAGATGACCCAAAAG CTTCACTCGTAAATGATATCGATGATGTTGAGAAGCATTTTCCAGGAACCCTCACTGCAATTAGGGACTGGTTCAGAGAC TACAAGATACCTGATGGGAAGCCTGCTAATAAATTTGGGCTTGGCAACCAGGCTGCAAATAAGGATTATGCGCTTAAGGT CATTACAGAGACCAATGAGTCCTGGGCTAAACTTATCAAGAGATCAATTCCTGCAGGAGAGCTGTCACTTGTGTAA
Download CDS Sequence

Protein sequence (LotjaGi1g1v0665200.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

MAATRAIAIASNSTCSLLTKRPFLGSHSLCLKNLKLSSSSRTTRSFTCKAIYNPQVSIKEEGQPQTLDYRVFFVDQSGNK VSPWHDIPLKLGDGVFNFIVEIPKETSAKMEVATDEPFTPIKQDTKKGKLRFYPYNIHWNYGLLPQTWEDPSLANSEVDG AFGDNDPVDVVEIGESQRKIGEILKVKPLAALAMIDEGELDWKIVAISLDDPKASLVNDIDDVEKHFPGTLTAIRDWFRD YKIPDGKPANKFGLGNQAANKDYALKVITETNESWAKLIKRSIPAGELSLV
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR10286:SF54
1 291 291 1.1E-174 –
PANTHER
PTHR10286
1 291 291 1.1E-174
IPR008162
Gene3D
G3DSA:3.90.80.10
56 290 235 1.9E-102
IPR036649
SUPERFAMILY
SSF50324
57 287 231 6.15E-87
IPR036649
CDD
cd00412
94 273 180 2.72378E-66
IPR008162
Pfam
PF00719
98 275 178 2.0E-46
IPR008162
ProSitePatterns
PS00387
164 170 7 -
IPR008162

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0000287
Molecular function Magnesium ion binding Interacting selectively and non-covalently with magnesium (Mg) ions.
Subterm of
GO:0004427
Molecular function Inorganic diphosphatase activity Catalysis of the reaction: diphosphate + H(2)O = H(+) + 2 phosphate.
Subterm of
GO:0005737
Cellular component Cytoplasm All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
Subterm of
GO:0006796
Biological process Phosphate-containing compound metabolic process The chemical reactions and pathways involving the phosphate group, the anion or salt of any phosphoric acid.
Subterm of

Genome browser

Expression data

Expression pattern

Expression pattern of LotjaGi1g1v0665200.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

Loading expression data from ljgea-geneid. Please wait…