Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0665600 |
| Transcript ID | LotjaGi1g1v0665600.1 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | S-adenosylmethionine-dependent methyltransferase; TAIR: AT2G41380.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; Swiss-Prot: sp|Q55EX9|Y8948_DICDI Putative methyltransferase DDB_G0268948; TrEMBL-Plants: tr|I3SZS3|I3SZS3_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0665600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:122771131..122775417) extracted from Lotus japonicus Gifu genome v1.2.
TTTTAATTTAGTTTTTCTTATTATTCTTTGATCACATCATCTATTTTATTACTCTTAAAATAATTTTCATCCCAAATCAT TGTCGATAAAAACACGTGTGAACTAGTGATAATTTTTAATTGAGGTGTCAATTTTTTTATTAGTGAAACTGAATTCTTTT CGTGACACATGGCTCTTTATTGGATGTGAAATTAACTTTTGAAGAAATTATTTTCTATAAATGATGAGGTGGAAGAAGAG AGGTAGATAGATGCAAATTTGATTGTTCCTAACATTCTCATCAAGAAATCAGAGAAAATTAAGAGAGAGATGTCAAATCT GTTTGTGAAACAGGCAAAACAATATGCAGGTGCAAGGCCAAGTTATCCACCGCAGCTCTTCCAATTCATTGCTTCAAAAA CCCCCTCTCACAACCTTGCTTGGGATGTTGCCACCGGAAGCGGCCAAGCTGCCAAATCGGTGACTCCTCCTTCCTTTAAA ACTCTTTACTTTTATCACCTCCCTGCACATATCTCTTTATCTTCTCTCTTTTCATTTATTTCATTGCAATTTATAATTAG TAAATATCTGCTGTTTTTATGCTGCTTTATATAGGTATTTTTATAATTATAAACTATATATGAAACTCGAAATAAAATAA AAATTCAGAAAAGCTATATAATATATGTTTACTATTAGGGCAGGCAGTCCCGGTTCACCCATAAATCATATTTTTATAAT TGACATTTAGTACATGCTATTTATAATATGTTTGCTATTTATAATATGTTTGTTATATGCTAAAATTACATATGGTTATA GAGTCTATCATAGTCATAGATCTTCTTGTTAGAAACCTCTCATATGGGTCATTCAGTGTATGTTCAATCATTCAAATTTC ACGTTTCTAATGTCAAGTCCTGAGTACGAGAGGTGTGTCGGAAATCTTACATTGACTAGATATGACCAAAATTTCCCTTA TAAATAGTAAAACAACTCTCATCTCTTAGTTGACTTTTGTGCTTGAGTTAAACCTCCAAAATTCTAATATATATCTCAAT CACATCATCATGTAATGATGTATGTACCTGGATATAGACTCAATGACCACTAGATAACTGAATTTGAAACTAGAACTTTA GGTACAGCTAATTCAGCTCAATCTGAGTCAAGTGATGAATTGGAACATTGAATTTACATGTGTATGCTGTCTTCTATATT GGTATAAGGAGTTCTTCTTAATTTGTCAATTTTCAGGATTGCTTATTCTCTGACCAAAACTAATTGGTATTTTCAGTTAG CTGAACTATACCAGAATGTCATAGCCACGGATGCTAGTGAGAAACAGCTTGAATTTGCAACAAAGCTCCCCAATGTGCGA TACCAGCATACCCCTTCAACCATGTCCATTGCAGAGGTTGAACAAAAGGTGGCACCTCAAGGAACCATAGACCTTGTGAC CATTGCCCAAGGTCTCCACTGGTTTGACCTCCCAAACTTCTATGCACAAGTCAATTGGGTTCTCAAGAAACCACATGGAG TCATTGCAGCGTGGTCTTACAATTTGCCTAGACTTAGTGATGCAGTAGACTCTGTCCTTGATCAATTTTATGGCTCTGAT ACTAAACCTTATTGGGACCAAGCACGCAGATTGGTTGAAAACAATTACAGAACCATTGATTTTCCATTTGAGCCTGTGGA TGGAGCTGATCACACAGGACCGTTTGAGTTTGTGACAGAGACTGTGATGGATTTCGATGATTTCTTAACTTATATAAAAT CATGGTCAGCATATCAGACAGCAAAGGAGAAGGGAGTGGAGCTTCTAGGCGAGGATGTGGTTGAAAAGTTCAAACTTGCT TGGGGTGAAGATGGCCAGAAGGTTGCCAAGTATCCAATTTATCTTAGAATTGGAAAAGTAAGTGATGCCTGAAAATATGT TCTTACTTGATAGTTAGCTCAAGAAACATTTTCTGTTTGTTGATTAAATAGTTTAGCTCTATTGATACTATTTGAATCAT TTATTGAGCTGATTGTTAAGGAAGAGGTGAAGTAGAAAGCTTAAATTCCAAGGGTAAAACAGTCCTCGTGTATCCAATTT TGTTTTATGCTTCCATGGCCAACCAAATTTCAAATTGCTAGAAATCCATTTTCTGCTGTTCTGCCAAGAACACTTCCTCT TGATGCTTATTTTCCATATAACCTTTAGATATATTGAGATACAAGGTTTTACATTCATTCTATTTCATGAGTTAGGATTT TCCCCCACATGTCTTTCCTAGTAAAAGACAATTTACTCTTTCATTGACTTTCTTCCACTTTCAAAAACCATCAATTATAA ATGCACTTATATGTCTTGGTTCATTCTGCCAAAAATATAACATGGTAAAGAATAAGATATCACCATACTTAGGTGATTAC TTGAACCAACATGAATGAGCATCGAACCAAGAAGCTTAGAGATTGTGAAGTGAATTGTGTACTTGGTGAAACTTTGGATG TATGAACTATGTAGAATGTAGGAGAAGGAGAAGGAGAAGGGGGCTTTGGAATTAATTGTGTTGGACATGGGCTTGTTGTG GTGGTTTCTGGTTAAGGGAAACACTGGTGGTTTAAGGTTGAAGTGGAACATGATGATTAAGAAATTTTGATGAAGGGGAT GATGGTGATGGATGAGTTGTAACTTGAGAAAGTCCCATTTCTTATCCAAACAACTCATTTTCCTTGGTTACAAGTGGACA TTTTCCTTTTTATAGTAGGAAAAGTATAAACTCTGATTTCTAATTAGACCCTTAGACCTTACATAAATACAACTCAAGAG TCCATATACGCTTTAAGTAATATATTGGCGAATGATATACATTAGCTGACCCTGTACATCAGCTGATCATTCCTAAAATG AGACGGTAAGGGCGAGTCATTCTTAAAATGAGAGGATGGCTCGCCATATTGGAAGAAAGGTCGCCATAAAATGCGAAGAC TTGTCTGATCTGAGTGAACCACCCAAAAGTCCTTGAAATCGGGCTGACCACTCTAAGAGTGTGTATAGCCCGCCTCGAGA TCTCTTTGCTAAGATCATTTGTTCGCCACAACCCAAGGAGTCGTTTAGAGGAGGGTTACCCGACTTGGATGTTTCTTGGG CGAGCATTCCAAATTGGAAGCCTTTGTCCAGTCTAATAAATTTCCACACATATATACTAATGAAGGGAATAATACAATGT ACAATCTATAAGAATTGATTTTGTTCTGACAAAATAGAATTGGTAATTTCAGTTAGCTGCACTATACCAGAATGTCATAG CCACGGATGTTAGTGAGAAACAGCTTGAATTTGCAACCAAGCTCCCCAATGTGATGTACCAGCATACCCCTCCCAAAAGG TAGCACTTCAAGGAACCATAGACCTTGTGACCATTGCTCAAGGTCTACACTGGTTTGACCGTTTGACCTCCCAAACTTCT ATGAACAAGTTAATTGGGTTCTCAAGAAACCTCATGGAGTCATTGCTGCTTGGTATTATGATTTGCCCAGAGTTTGTGAT GTGGTAGACTCTGTCCTTCATCAATGTTATTTCTTTTATATGAAATCTTATTGGGATCCAGCTTGTAGATTGATTGGAAA AAAAGTATAGAACCATTGAAATTCCATTTGAGTCTGTGGATGAAGTTGATCACACAGGACCTTTTGAGTTTGTGACAGAG GTTGTGATGGATTTGGATGATTTCTTTACTTATATAAGATCATGGTCAGCATATCAGACAGCAAAGGAGAAGGGAGTGGA GCTTCTTAGGGAGGATGTGGTTGAAAAGTTCAAACTTGCTTGGGGTGAAGATGGCCAGAAGATTGCCAAGTTTCCAATTT ATCTGAGAATTGGTAGAGTAAGTGATGCCTGAAAATATATATGTTCTTGTTAGTTACTTGGTGGAAGGTAGCACAAGAAA CATTTTCTACTTGTTGATTAAATAATTTGGCTCCACCATTTATGTGAATCAAAAGGTGGAAGTAGAAAGCTTAAATTCCT GGGGTAAAATAGTTCTCGTGTATCCAAATTTGGTGTTTTATGCATCAGTCTGCCAACCCAAATTTTAAATAAAAAATGGG CTTAAATGGTCAATTGGCCCCTGTAATTATAAAGGGAATCAGTCTTGATCCTTGTAAAATTTTCACATCAAATTGGGTCC CTAAAAATATTTTTTTTAATCCAATTAAGGACAAAGTGTGCTTTGGTCTGATGTGTCTTAATTTTTACATTGTCAACATT TTCACGTGGCTTTTATCTTTTTTTTTTTAATAAAAACTAATTCCAAC
CDS sequence (LotjaGi1g1v0665600.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTCAAATCTGTTTGTGAAACAGGCAAAACAATATGCAGGTGCAAGGCCAAGTTATCCACCGCAGCTCTTCCAATTCAT TGCTTCAAAAACCCCCTCTCACAACCTTGCTTGGGATGTTGCCACCGGAAGCGGCCAAGCTGCCAAATCGTTAGCTGAAC TATACCAGAATGTCATAGCCACGGATGCTAGTGAGAAACAGCTTGAATTTGCAACAAAGCTCCCCAATGTGCGATACCAG CATACCCCTTCAACCATGTCCATTGCAGAGGTTGAACAAAAGGTGGCACCTCAAGGAACCATAGACCTTGTGACCATTGC CCAAGGTCTCCACTGGTTTGACCTCCCAAACTTCTATGCACAAGTCAATTGGGTTCTCAAGAAACCACATGGAGTCATTG CAGCGTGGTCTTACAATTTGCCTAGACTTAGTGATGCAGTAGACTCTGTCCTTGATCAATTTTATGGCTCTGATACTAAA CCTTATTGGGACCAAGCACGCAGATTGGTTGAAAACAATTACAGAACCATTGATTTTCCATTTGAGCCTGTGGATGGAGC TGATCACACAGGACCGTTTGAGTTTGTGACAGAGACTGTGATGGATTTCGATGATTTCTTAACTTATATAAAATCATGGT CAGCATATCAGACAGCAAAGGAGAAGGGAGTGGAGCTTCTAGGCGAGGATGTGGTTGAAAAGTTCAAACTTGCTTGGGGT GAAGATGGCCAGAAGGTTGCCAAGTATCCAATTTATCTTAGAATTGGAAAAGTAAGTGATGCCTGA
Protein sequence (LotjaGi1g1v0665600.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSNLFVKQAKQYAGARPSYPPQLFQFIASKTPSHNLAWDVATGSGQAAKSLAELYQNVIATDASEKQLEFATKLPNVRYQ HTPSTMSIAEVEQKVAPQGTIDLVTIAQGLHWFDLPNFYAQVNWVLKKPHGVIAAWSYNLPRLSDAVDSVLDQFYGSDTK PYWDQARRLVENNYRTIDFPFEPVDGADHTGPFEFVTETVMDFDDFLTYIKSWSAYQTAKEKGVELLGEDVVEKFKLAWG EDGQKVAKYPIYLRIGKVSDA
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 260 | 260 | 2.1E-142 | – | |
| SUPERFAMILY | 3 | 174 | 172 | 2.36E-18 | ||
| Gene3D | 16 | 254 | 239 | 1.9E-82 | – | |
| Pfam | 39 | 128 | 90 | 1.5E-8 | ||
| Gene3D | 140 | 244 | 105 | 1.9E-82 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Methyltransferase activity | Catalysis of the transfer of a methyl group to an acceptor molecule. |
Expression pattern of LotjaGi1g1v0665600.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…