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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0677900 |
| Transcript ID | LotjaGi1g1v0677900.1 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | BZIP transcription factor; TAIR: AT1G19490.1 Basic-leucine zipper (bZIP) transcription factor family protein; Swiss-Prot: sp|P23922|HBP1A_WHEAT Transcription factor HBP-1a; TrEMBL-Plants: tr|K7MZ80|K7MZ80_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0677900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:124452484..124456497) extracted from Lotus japonicus Gifu genome v1.2.
ATATCACACACCCTCTCCTTACCACCCTTTCCCTCTATGTTCGGTTCGGTTCCTCTCTCTCTCTCTCTCTCACGATGGAC GTGGATTCAGATAAACGCTCTTCTTCCTCTTTCTCTTTTTCTTCTTCTCCTTCTTCTTCGCCGTCGTGTGCCTCGGAGGA GGAGATTGAGGCGGCGGAGACTCTTGCTCACTTGGCACTCCGCCATGTTGATGATAAATGTTGCACCACCGCTGCCAATA ACGCCATACGTCACTCGCCGACTCCTCACACTCTTATCACCCCTGCGGTAATTACTTCCTTCTTTCGTTTTTTCAAATTT AATCCCCTAATAAGAGTAAGTCAAATTGCTATGTCCATGGTTTTCATGTTCATTGAATGGATAAGAGTGAGTGTGATGGA GTTGTGATAGGAATTTAGAAATGGTTTAATTTATGGCAGGGCCAAGGTGTTGCAGGTCAGCAGCAGCTAGATGAGAAGAT GGAGCATGATGACTGTTTGGGACCTGTGAAGGTGGAGCAGGATGCTGAATTACCTACTAGGACTACTACAAGCCACTCTT CAGTTCGCTGTAGCAAGTCGAGGCGTAATTTGACTGAGGTGCATGAGATGAGAGATTGTGAAATATTTTGTAATTAAATT TCTAGTTATCATTGATTAGTTGTAGTTTAATGGATTATTAATGTTCAGGAGGAAAAAGAAGCGCGGAGGATACGCAGGGT GTTGGCAAATAGAGAGTCAGCTAGGCAAACAATTCGCCGTAGACAGGTATTTTTTCGCATCCACAAATGAACTTATTGTT AGAACAGTAACGCGAATACAAAATTAGAGTAGAGAGTAACACACAAGACTTTGGTCACGCAGTCCGTTTGGCCGGCCAAA TTGCTTACGTCTACAGAGCAACTATAGTTCCTTTTCTCAATTAGGATTCAAAATACACTAGGGTTAGTGATACAAGCATA TATAGGGATATTAATGATCTAGATTACAATAATGCCCCTAAATCGTACCAATTTAGCTTAAAATAAACTTCCATTTGTAG CTTTGAGAAAAATGCACAGTGGGATGTAGAAAGAAGGCAACTCGGTCCAAGCACACAATAACACTTGTTGAATTACTATT ACAGGTCTTCAATGACCACATAGTTTGTTATGCACTTTTTTAATCACCCCTTCCACCTCAGGGGTCTTTAGATTAATGGA AGTCATTATTCATTGACATTTCTGACATAGCTGTTTATTGGACAATGCTGATCTGCACTATTCCATTTAGTTGGATGATG ATCTAAACTGTTCTTGTAGCAAATGAGTGTATCCATTATCCTAGAACAGAACATTTTGTAACCTCCTTCAAACTTGTAGA ATTGCCCAAGTCCCTATAGAGCCACTAGCCATGGCTGTTCTTATAAGGGTTTTCAGATTAAGAGTTTCATTTCTAAGATA TCCAGTAAACTTGAAATAATCTGATAATTTAAAACTTCTGAAATTTTAACATTTTATGAAAGAAAAATTACTTCTTTTTT TTAGCCATCTAATTGTTCTGGCTGATTAATTTCTGTATTAAGCAGTTTCATTCTTTTTTTTTTAAAATGCTTCAGGCTCT GAGTGAGGAGTTAACCAGAAAAGCTGCCACTTTACTTATGGAGAATGAAAACCTAAAGAGGGTAAGGCTACTATGTCATT ATTAAGCTACCTTCTGGTCTTCTTTTCTCACTTCCTCTTTATTCTGTTGTGCTTATTTATATGAAGCATCTATTTAAGAT ATTAATTGTTTCTCAATTTTTTTATCTCTTCGGTTTTTATCTAATCGCTCACCTACATTTTTGGTGAAAAAGGAGAAGGA GTTGGCTTTAAAAGAGTATCAGTCTTTGGAAACTACAAATAAGCACTTAAAGGCTCAAGTAAGATGTTTTTCTATGGAAG AAATCTTGAAGCTGGGTGTAACTCTCAGTTTACAAAAGAAGTAAATAAACACTACAAAACTGACATTTACTTCCATTTTC AGATAGCCAAGTCAATAAACACTGAAGTGCAGAAAACTCCTGTTGAGCAGGAGTCATCTGTGGCTGAGGTAGCACCTGTG TATGGCAATAGTCCATGGTTTCTTTATAACCATTTTCCAGTTACACAGTTATTTTGGCCCTCCATCCTTCAGTCTCCTAG TCCAGTTCAATTACAACATACACCATTTAATTCGATTGCCATTCCACCAAATGTTTATGTGCCATGTTCTTCTGAGTCTG AATCACATCACAAGCAAAATAACCTTATTGACAATCGAACGCAAAATCCATTGTACATGTTTCCATGTCCTTGGTTACAC CCTCTCCCAGAATTTGGAAATGGACAGTCACCACCTTCCACTAGCTTGAAAGATAAACTTGATAAACCTCCTGGTAAAAA TTGTCGTACTAGTTTATCATTAAATACAGCGGCAAACGTGGATTATCAACCAGCTCCACCTATCAAACTTAAAACAGAAG CTTCTGGCTTGACAGAAGCCAGATCAGTTAATGGCCCAGTACACGCAACTCCAAGTTTTTCTTTGGATGGAGGTGAGCAG AAATCAAAATGTCACATTGTAGAAAAGTTTAGACGACCGGCACTTGGTTGTAACGGTCATGCTTCTGCTGTCAAGCAAGA ACCAGAGCTTCAGTTACATTCTGCTCCCAACACTAAGGCATCTTCAACAGCTTCTCATACTGCAGCTTCTTCACTGGAAA GGGAACAAGAACAGTTCACATCCCTAGGTCAAAATCTAGTGGATGCAGTTGCTGCAGGAGAGGCAAGAAAGAGGAGAAAG GAACTAACAAAGCTAAAAAGCATCCATAATCTCCAGTCCCGGATGGAGTGTTGACTTCTCTAATAAACTTGGTTAAATAG TTCAAAAAGGGAGCAAAAGTTCATCCATTACAGATTTTGAAGCTTCAATGATAAATAAGTTTTTGGAAGTTGAGCTGAAT ACAGGTTAACTAAATCCATTGATGGCCTTAGAAGGAAGAGAATTGAAGTCCAAAATCCAAATCATGTACAGCACTGATGA CATTATAGGTTTAAGTTTTTCTTCATTAATCTTGCTTGTTTCTTTTTTTATTTACTTCCTATACTGGGAATTTTGTTTCC CTCCCAGGGAAGAGAAAGGGTAGGGGAAGTTGGTTTTTTAAAGTGGTGAAACTGATCAAATTTTTTATTGGTCAATTTTA TGATCCGGATTATTCAACTTCTAACGTTGTTTCTGAGCAGACAGTCTAAATTTCTCTTCCCATTATCTAAAGCAATTAAC TAACATAAATTTACACTACAGGAGAAGAAAGAATGAAAAATTCTAAAACTGAAATTCCTATATCATGTAATATGTTCACT TGAGGCTCCGGTTCAATATTGTGGCTTAAAAACTACTATCGGACTCCTAACACTGTGTTTAGAGTCACTCCATTCAAGTG ATGCAGATAATAACAGTGTCCCATCTGGCATTGGAGGCCCGTTCAGGACAACCTTGAATGACAGGTCTTGGTGCAACTGT CTAAATTCCAATGTATCCGGGACGACCTTCACTGTAAGACCCTTGGGTGCTGTGACTTTAGCCTTGTACGTTGAATTTGC AGATCCTACATTAGTCACAGTCCTGAAAAAAACTGCAGAAATTCTGGAACTGGCACCCAGGAGCTGGACATGCATGCTGG GGTAGTTGAGTCCATCTGTGCCAGGTGCAGGCTTAATGGTTGTGCAGTTGAAACCTCTTGTGCCAATTAATATACCTATG CTAGTGCTGTTGTAGCCTTGCTTGCACAAGAAGGAAAGGTAGGAGTTCATTCCAATGTCATAGAGCAGGCCTGGATGCAA AGCACTAACTGGGCTAATCTGTCCTGACCCAGATCCCAGCTCCGTGAAATTGTCATTGATTTTCAAAGGAGTTGCTGAAT TGTTGAGATGAAAATGTTAGATTTCTTCCACAAAGAATGTACTACCAGTCAACATTGCAATTTCCAATGATAGGGAAAGA AAAAAAAAGGTTTA
CDS sequence (LotjaGi1g1v0677900.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGACGTGGATTCAGATAAACGCTCTTCTTCCTCTTTCTCTTTTTCTTCTTCTCCTTCTTCTTCGCCGTCGTGTGCCTC GGAGGAGGAGATTGAGGCGGCGGAGACTCTTGCTCACTTGGCACTCCGCCATGTTGATGATAAATGTTGCACCACCGCTG CCAATAACGCCATACGTCACTCGCCGACTCCTCACACTCTTATCACCCCTGCGGGCCAAGGTGTTGCAGGTCAGCAGCAG CTAGATGAGAAGATGGAGCATGATGACTGTTTGGGACCTGTGAAGGTGGAGCAGGATGCTGAATTACCTACTAGGACTAC TACAAGCCACTCTTCAGTTCGCTGTAGCAAGTCGAGGCGTAATTTGACTGAGGAGGAAAAAGAAGCGCGGAGGATACGCA GGGTGTTGGCAAATAGAGAGTCAGCTAGGCAAACAATTCGCCGTAGACAGGCTCTGAGTGAGGAGTTAACCAGAAAAGCT GCCACTTTACTTATGGAGAATGAAAACCTAAAGAGGGAGAAGGAGTTGGCTTTAAAAGAGTATCAGTCTTTGGAAACTAC AAATAAGCACTTAAAGGCTCAAATAGCCAAGTCAATAAACACTGAAGTGCAGAAAACTCCTGTTGAGCAGGAGTCATCTG TGGCTGAGGTAGCACCTGTGTATGGCAATAGTCCATGGTTTCTTTATAACCATTTTCCAGTTACACAGTTATTTTGGCCC TCCATCCTTCAGTCTCCTAGTCCAGTTCAATTACAACATACACCATTTAATTCGATTGCCATTCCACCAAATGTTTATGT GCCATGTTCTTCTGAGTCTGAATCACATCACAAGCAAAATAACCTTATTGACAATCGAACGCAAAATCCATTGTACATGT TTCCATGTCCTTGGTTACACCCTCTCCCAGAATTTGGAAATGGACAGTCACCACCTTCCACTAGCTTGAAAGATAAACTT GATAAACCTCCTGGTAAAAATTGTCGTACTAGTTTATCATTAAATACAGCGGCAAACGTGGATTATCAACCAGCTCCACC TATCAAACTTAAAACAGAAGCTTCTGGCTTGACAGAAGCCAGATCAGTTAATGGCCCAGTACACGCAACTCCAAGTTTTT CTTTGGATGGAGGTGAGCAGAAATCAAAATGTCACATTGTAGAAAAGTTTAGACGACCGGCACTTGGTTGTAACGGTCAT GCTTCTGCTGTCAAGCAAGAACCAGAGCTTCAGTTACATTCTGCTCCCAACACTAAGGCATCTTCAACAGCTTCTCATAC TGCAGCTTCTTCACTGGAAAGGGAACAAGAACAGTTCACATCCCTAGGTCAAAATCTAGTGGATGCAGTTGCTGCAGGAG AGGCAAGAAAGAGGAGAAAGGAACTAACAAAGCTAAAAAGCATCCATAATCTCCAGTCCCGGATGGAGTGTTGA
Protein sequence (LotjaGi1g1v0677900.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MDVDSDKRSSSSFSFSSSPSSSPSCASEEEIEAAETLAHLALRHVDDKCCTTAANNAIRHSPTPHTLITPAGQGVAGQQQ LDEKMEHDDCLGPVKVEQDAELPTRTTTSHSSVRCSKSRRNLTEEEKEARRIRRVLANRESARQTIRRRQALSEELTRKA ATLLMENENLKREKELALKEYQSLETTNKHLKAQIAKSINTEVQKTPVEQESSVAEVAPVYGNSPWFLYNHFPVTQLFWP SILQSPSPVQLQHTPFNSIAIPPNVYVPCSSESESHHKQNNLIDNRTQNPLYMFPCPWLHPLPEFGNGQSPPSTSLKDKL DKPPGKNCRTSLSLNTAANVDYQPAPPIKLKTEASGLTEARSVNGPVHATPSFSLDGGEQKSKCHIVEKFRRPALGCNGH ASAVKQEPELQLHSAPNTKASSTASHTAASSLEREQEQFTSLGQNLVDAVAAGEARKRRKELTKLKSIHNLQSRMEC
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP_GRAM_POSITIVE | 1 | 26 | 26 | - | – | |
| MobiDBLite | 1 | 30 | 30 | - | – | |
| MobiDBLite | 8 | 27 | 20 | - | – | |
| PANTHER | 98 | 465 | 368 | 1.1E-50 | – | |
| PANTHER | 98 | 465 | 368 | 1.1E-50 | – | |
| MobiDBLite | 102 | 116 | 15 | - | – | |
| MobiDBLite | 102 | 125 | 24 | - | – | |
| SMART | 126 | 190 | 65 | 7.8E-8 | ||
| Pfam | 126 | 188 | 63 | 1.1E-6 | ||
| ProSiteProfiles | 128 | 191 | 64 | 9.703 | ||
| SUPERFAMILY | 130 | 185 | 56 | 1.45E-5 | – | |
| CDD | 131 | 182 | 52 | 7.83636E-14 | – | |
| Coils | 153 | 194 | 42 | - | – | |
| MobiDBLite | 305 | 326 | 22 | - | – | |
| MobiDBLite | 406 | 440 | 35 | - | – | |
| MobiDBLite | 411 | 440 | 30 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | DNA-binding transcription factor activity | A protein or a member of a complex that interacts selectively and non-covalently with a specific DNA sequence (sometimes referred to as a motif) within the regulatory region of a gene to modulate transcription. Regulatory regions include promoters (proximal and distal) and enhancers. Genes are transcriptional units, and include bacterial operons. | ||
| Biological process | Regulation of transcription, DNA-templated | Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription. |
Expression pattern of LotjaGi1g1v0677900.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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