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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0677900 |
| Transcript ID | LotjaGi1g1v0677900.2 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | BZIP transcription factor; TAIR: AT1G19490.1 Basic-leucine zipper (bZIP) transcription factor family protein; Swiss-Prot: sp|P23922|HBP1A_WHEAT Transcription factor HBP-1a; TrEMBL-Plants: tr|K7MZ80|K7MZ80_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0677900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:124452484..124456497) extracted from Lotus japonicus Gifu genome v1.2.
ATATCACACACCCTCTCCTTACCACCCTTTCCCTCTATGTTCGGTTCGGTTCCTCTCTCTCTCTCTCTCTCACGATGGAC GTGGATTCAGATAAACGCTCTTCTTCCTCTTTCTCTTTTTCTTCTTCTCCTTCTTCTTCGCCGTCGTGTGCCTCGGAGGA GGAGATTGAGGCGGCGGAGACTCTTGCTCACTTGGCACTCCGCCATGTTGATGATAAATGTTGCACCACCGCTGCCAATA ACGCCATACGTCACTCGCCGACTCCTCACACTCTTATCACCCCTGCGGTAATTACTTCCTTCTTTCGTTTTTTCAAATTT AATCCCCTAATAAGAGTAAGTCAAATTGCTATGTCCATGGTTTTCATGTTCATTGAATGGATAAGAGTGAGTGTGATGGA GTTGTGATAGGAATTTAGAAATGGTTTAATTTATGGCAGGGCCAAGGTGTTGCAGGTCAGCAGCAGCTAGATGAGAAGAT GGAGCATGATGACTGTTTGGGACCTGTGAAGGTGGAGCAGGATGCTGAATTACCTACTAGGACTACTACAAGCCACTCTT CAGTTCGCTGTAGCAAGTCGAGGCGTAATTTGACTGAGGTGCATGAGATGAGAGATTGTGAAATATTTTGTAATTAAATT TCTAGTTATCATTGATTAGTTGTAGTTTAATGGATTATTAATGTTCAGGAGGAAAAAGAAGCGCGGAGGATACGCAGGGT GTTGGCAAATAGAGAGTCAGCTAGGCAAACAATTCGCCGTAGACAGGTATTTTTTCGCATCCACAAATGAACTTATTGTT AGAACAGTAACGCGAATACAAAATTAGAGTAGAGAGTAACACACAAGACTTTGGTCACGCAGTCCGTTTGGCCGGCCAAA TTGCTTACGTCTACAGAGCAACTATAGTTCCTTTTCTCAATTAGGATTCAAAATACACTAGGGTTAGTGATACAAGCATA TATAGGGATATTAATGATCTAGATTACAATAATGCCCCTAAATCGTACCAATTTAGCTTAAAATAAACTTCCATTTGTAG CTTTGAGAAAAATGCACAGTGGGATGTAGAAAGAAGGCAACTCGGTCCAAGCACACAATAACACTTGTTGAATTACTATT ACAGGTCTTCAATGACCACATAGTTTGTTATGCACTTTTTTAATCACCCCTTCCACCTCAGGGGTCTTTAGATTAATGGA AGTCATTATTCATTGACATTTCTGACATAGCTGTTTATTGGACAATGCTGATCTGCACTATTCCATTTAGTTGGATGATG ATCTAAACTGTTCTTGTAGCAAATGAGTGTATCCATTATCCTAGAACAGAACATTTTGTAACCTCCTTCAAACTTGTAGA ATTGCCCAAGTCCCTATAGAGCCACTAGCCATGGCTGTTCTTATAAGGGTTTTCAGATTAAGAGTTTCATTTCTAAGATA TCCAGTAAACTTGAAATAATCTGATAATTTAAAACTTCTGAAATTTTAACATTTTATGAAAGAAAAATTACTTCTTTTTT TTAGCCATCTAATTGTTCTGGCTGATTAATTTCTGTATTAAGCAGTTTCATTCTTTTTTTTTTAAAATGCTTCAGGCTCT GAGTGAGGAGTTAACCAGAAAAGCTGCCACTTTACTTATGGAGAATGAAAACCTAAAGAGGGTAAGGCTACTATGTCATT ATTAAGCTACCTTCTGGTCTTCTTTTCTCACTTCCTCTTTATTCTGTTGTGCTTATTTATATGAAGCATCTATTTAAGAT ATTAATTGTTTCTCAATTTTTTTATCTCTTCGGTTTTTATCTAATCGCTCACCTACATTTTTGGTGAAAAAGGAGAAGGA GTTGGCTTTAAAAGAGTATCAGTCTTTGGAAACTACAAATAAGCACTTAAAGGCTCAAGTAAGATGTTTTTCTATGGAAG AAATCTTGAAGCTGGGTGTAACTCTCAGTTTACAAAAGAAGTAAATAAACACTACAAAACTGACATTTACTTCCATTTTC AGATAGCCAAGTCAATAAACACTGAAGTGCAGAAAACTCCTGTTGAGCAGGAGTCATCTGTGGCTGAGGTAGCACCTGTG TATGGCAATAGTCCATGGTTTCTTTATAACCATTTTCCAGTTACACAGTTATTTTGGCCCTCCATCCTTCAGTCTCCTAG TCCAGTTCAATTACAACATACACCATTTAATTCGATTGCCATTCCACCAAATGTTTATGTGCCATGTTCTTCTGAGTCTG AATCACATCACAAGCAAAATAACCTTATTGACAATCGAACGCAAAATCCATTGTACATGTTTCCATGTCCTTGGTTACAC CCTCTCCCAGAATTTGGAAATGGACAGTCACCACCTTCCACTAGCTTGAAAGATAAACTTGATAAACCTCCTGGTAAAAA TTGTCGTACTAGTTTATCATTAAATACAGCGGCAAACGTGGATTATCAACCAGCTCCACCTATCAAACTTAAAACAGAAG CTTCTGGCTTGACAGAAGCCAGATCAGTTAATGGCCCAGTACACGCAACTCCAAGTTTTTCTTTGGATGGAGGTGAGCAG AAATCAAAATGTCACATTGTAGAAAAGTTTAGACGACCGGCACTTGGTTGTAACGGTCATGCTTCTGCTGTCAAGCAAGA ACCAGAGCTTCAGTTACATTCTGCTCCCAACACTAAGGCATCTTCAACAGCTTCTCATACTGCAGCTTCTTCACTGGAAA GGGAACAAGAACAGTTCACATCCCTAGGTCAAAATCTAGTGGATGCAGTTGCTGCAGGAGAGGCAAGAAAGAGGAGAAAG GAACTAACAAAGCTAAAAAGCATCCATAATCTCCAGTCCCGGATGGAGTGTTGACTTCTCTAATAAACTTGGTTAAATAG TTCAAAAAGGGAGCAAAAGTTCATCCATTACAGATTTTGAAGCTTCAATGATAAATAAGTTTTTGGAAGTTGAGCTGAAT ACAGGTTAACTAAATCCATTGATGGCCTTAGAAGGAAGAGAATTGAAGTCCAAAATCCAAATCATGTACAGCACTGATGA CATTATAGGTTTAAGTTTTTCTTCATTAATCTTGCTTGTTTCTTTTTTTATTTACTTCCTATACTGGGAATTTTGTTTCC CTCCCAGGGAAGAGAAAGGGTAGGGGAAGTTGGTTTTTTAAAGTGGTGAAACTGATCAAATTTTTTATTGGTCAATTTTA TGATCCGGATTATTCAACTTCTAACGTTGTTTCTGAGCAGACAGTCTAAATTTCTCTTCCCATTATCTAAAGCAATTAAC TAACATAAATTTACACTACAGGAGAAGAAAGAATGAAAAATTCTAAAACTGAAATTCCTATATCATGTAATATGTTCACT TGAGGCTCCGGTTCAATATTGTGGCTTAAAAACTACTATCGGACTCCTAACACTGTGTTTAGAGTCACTCCATTCAAGTG ATGCAGATAATAACAGTGTCCCATCTGGCATTGGAGGCCCGTTCAGGACAACCTTGAATGACAGGTCTTGGTGCAACTGT CTAAATTCCAATGTATCCGGGACGACCTTCACTGTAAGACCCTTGGGTGCTGTGACTTTAGCCTTGTACGTTGAATTTGC AGATCCTACATTAGTCACAGTCCTGAAAAAAACTGCAGAAATTCTGGAACTGGCACCCAGGAGCTGGACATGCATGCTGG GGTAGTTGAGTCCATCTGTGCCAGGTGCAGGCTTAATGGTTGTGCAGTTGAAACCTCTTGTGCCAATTAATATACCTATG CTAGTGCTGTTGTAGCCTTGCTTGCACAAGAAGGAAAGGTAGGAGTTCATTCCAATGTCATAGAGCAGGCCTGGATGCAA AGCACTAACTGGGCTAATCTGTCCTGACCCAGATCCCAGCTCCGTGAAATTGTCATTGATTTTCAAAGGAGTTGCTGAAT TGTTGAGATGAAAATGTTAGATTTCTTCCACAAAGAATGTACTACCAGTCAACATTGCAATTTCCAATGATAGGGAAAGA AAAAAAAAGGTTTA
CDS sequence (LotjaGi1g1v0677900.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAGCATGATGACTGTTTGGGACCTGTGAAGGTGGAGCAGGATGCTGAATTACCTACTAGGACTACTACAAGCCACTC TTCAGTTCGCTGTAGCAAGTCGAGGCGTAATTTGACTGAGGAGGAAAAAGAAGCGCGGAGGATACGCAGGGTGTTGGCAA ATAGAGAGTCAGCTAGGCAAACAATTCGCCGTAGACAGGCTCTGAGTGAGGAGTTAACCAGAAAAGCTGCCACTTTACTT ATGGAGAATGAAAACCTAAAGAGGGAGAAGGAGTTGGCTTTAAAAGAGTATCAGTCTTTGGAAACTACAAATAAGCACTT AAAGGCTCAAATAGCCAAGTCAATAAACACTGAAGTGCAGAAAACTCCTGTTGAGCAGGAGTCATCTGTGGCTGAGGTAG CACCTGTGTATGGCAATAGTCCATGGTTTCTTTATAACCATTTTCCAGTTACACAGTTATTTTGGCCCTCCATCCTTCAG TCTCCTAGTCCAGTTCAATTACAACATACACCATTTAATTCGATTGCCATTCCACCAAATGTTTATGTGCCATGTTCTTC TGAGTCTGAATCACATCACAAGCAAAATAACCTTATTGACAATCGAACGCAAAATCCATTGTACATGTTTCCATGTCCTT GGTTACACCCTCTCCCAGAATTTGGAAATGGACAGTCACCACCTTCCACTAGCTTGAAAGATAAACTTGATAAACCTCCT GGTAAAAATTGTCGTACTAGTTTATCATTAAATACAGCGGCAAACGTGGATTATCAACCAGCTCCACCTATCAAACTTAA AACAGAAGCTTCTGGCTTGACAGAAGCCAGATCAGTTAATGGCCCAGTACACGCAACTCCAAGTTTTTCTTTGGATGGAG GTGAGCAGAAATCAAAATGTCACATTGTAGAAAAGTTTAGACGACCGGCACTTGGTTGTAACGGTCATGCTTCTGCTGTC AAGCAAGAACCAGAGCTTCAGTTACATTCTGCTCCCAACACTAAGGCATCTTCAACAGCTTCTCATACTGCAGCTTCTTC ACTGGAAAGGGAACAAGAACAGTTCACATCCCTAGGTCAAAATCTAGTGGATGCAGTTGCTGCAGGAGAGGCAAGAAAGA GGAGAAAGGAACTAACAAAGCTAAAAAGCATCCATAATCTCCAGTCCCGGATGGAGTGTTGA
Protein sequence (LotjaGi1g1v0677900.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MEHDDCLGPVKVEQDAELPTRTTTSHSSVRCSKSRRNLTEEEKEARRIRRVLANRESARQTIRRRQALSEELTRKAATLL MENENLKREKELALKEYQSLETTNKHLKAQIAKSINTEVQKTPVEQESSVAEVAPVYGNSPWFLYNHFPVTQLFWPSILQ SPSPVQLQHTPFNSIAIPPNVYVPCSSESESHHKQNNLIDNRTQNPLYMFPCPWLHPLPEFGNGQSPPSTSLKDKLDKPP GKNCRTSLSLNTAANVDYQPAPPIKLKTEASGLTEARSVNGPVHATPSFSLDGGEQKSKCHIVEKFRRPALGCNGHASAV KQEPELQLHSAPNTKASSTASHTAASSLEREQEQFTSLGQNLVDAVAAGEARKRRKELTKLKSIHNLQSRMEC
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 42 | 42 | - | – | |
| MobiDBLite | 17 | 32 | 16 | - | – | |
| PANTHER | 18 | 381 | 364 | 7.6E-53 | – | |
| PANTHER | 18 | 381 | 364 | 7.6E-53 | – | |
| Pfam | 42 | 104 | 63 | 1.1E-6 | ||
| SMART | 42 | 106 | 65 | 7.8E-8 | ||
| ProSiteProfiles | 44 | 107 | 64 | 9.703 | ||
| SUPERFAMILY | 46 | 101 | 56 | 6.99E-6 | – | |
| CDD | 47 | 98 | 52 | 1.24442E-13 | – | |
| Coils | 69 | 110 | 42 | - | – | |
| MobiDBLite | 221 | 242 | 22 | - | – | |
| MobiDBLite | 325 | 349 | 25 | - | – | |
| MobiDBLite | 327 | 349 | 23 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | DNA-binding transcription factor activity | A protein or a member of a complex that interacts selectively and non-covalently with a specific DNA sequence (sometimes referred to as a motif) within the regulatory region of a gene to modulate transcription. Regulatory regions include promoters (proximal and distal) and enhancers. Genes are transcriptional units, and include bacterial operons. | ||
| Biological process | Regulation of transcription, DNA-templated | Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription. |
Expression pattern of LotjaGi1g1v0677900.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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