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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0677900 |
| Transcript ID | LotjaGi1g1v0677900.3 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Transcription factor; TAIR: AT1G19490.1 Basic-leucine zipper (bZIP) transcription factor family protein; Swiss-Prot: sp|P23922|HBP1A_WHEAT Transcription factor HBP-1a; TrEMBL-Plants: tr|K7MZ80|K7MZ80_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0677900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:124452583..124456491) extracted from Lotus japonicus Gifu genome v1.2.
CACACCCTCTCCTTACCACCCTTTCCCTCTATGTTCGGTTCGGTTCCTCTCTCTCTCTCTCTCTCACGATGGACGTGGAT TCAGATAAACGCTCTTCTTCCTCTTTCTCTTTTTCTTCTTCTCCTTCTTCTTCGCCGTCGTGTGCCTCGGAGGAGGAGAT TGAGGCGGCGGAGACTCTTGCTCACTTGGCACTCCGCCATGTTGATGATAAATGTTGCACCACCGCTGCCAATAACGCCA TACGTCACTCGCCGACTCCTCACACTCTTATCACCCCTGCGGTAATTACTTCCTTCTTTCGTTTTTTCAAATTTAATCCC CTAATAAGAGTAAGTCAAATTGCTATGTCCATGGTTTTCATGTTCATTGAATGGATAAGAGTGAGTGTGATGGAGTTGTG ATAGGAATTTAGAAATGGTTTAATTTATGGCAGGGCCAAGGTGTTGCAGGTCAGCAGCAGCTAGATGAGAAGATGGAGCA TGATGACTGTTTGGGACCTGTGAAGGTGGAGCAGGATGCTGAATTACCTACTAGGACTACTACAAGCCACTCTTCAGTTC GCTGTAGCAAGTCGAGGCGTAATTTGACTGAGGTGCATGAGATGAGAGATTGTGAAATATTTTGTAATTAAATTTCTAGT TATCATTGATTAGTTGTAGTTTAATGGATTATTAATGTTCAGGAGGAAAAAGAAGCGCGGAGGATACGCAGGGTGTTGGC AAATAGAGAGTCAGCTAGGCAAACAATTCGCCGTAGACAGGTATTTTTTCGCATCCACAAATGAACTTATTGTTAGAACA GTAACGCGAATACAAAATTAGAGTAGAGAGTAACACACAAGACTTTGGTCACGCAGTCCGTTTGGCCGGCCAAATTGCTT ACGTCTACAGAGCAACTATAGTTCCTTTTCTCAATTAGGATTCAAAATACACTAGGGTTAGTGATACAAGCATATATAGG GATATTAATGATCTAGATTACAATAATGCCCCTAAATCGTACCAATTTAGCTTAAAATAAACTTCCATTTGTAGCTTTGA GAAAAATGCACAGTGGGATGTAGAAAGAAGGCAACTCGGTCCAAGCACACAATAACACTTGTTGAATTACTATTACAGGT CTTCAATGACCACATAGTTTGTTATGCACTTTTTTAATCACCCCTTCCACCTCAGGGGTCTTTAGATTAATGGAAGTCAT TATTCATTGACATTTCTGACATAGCTGTTTATTGGACAATGCTGATCTGCACTATTCCATTTAGTTGGATGATGATCTAA ACTGTTCTTGTAGCAAATGAGTGTATCCATTATCCTAGAACAGAACATTTTGTAACCTCCTTCAAACTTGTAGAATTGCC CAAGTCCCTATAGAGCCACTAGCCATGGCTGTTCTTATAAGGGTTTTCAGATTAAGAGTTTCATTTCTAAGATATCCAGT AAACTTGAAATAATCTGATAATTTAAAACTTCTGAAATTTTAACATTTTATGAAAGAAAAATTACTTCTTTTTTTTAGCC ATCTAATTGTTCTGGCTGATTAATTTCTGTATTAAGCAGTTTCATTCTTTTTTTTTTAAAATGCTTCAGGCTCTGAGTGA GGAGTTAACCAGAAAAGCTGCCACTTTACTTATGGAGAATGAAAACCTAAAGAGGGTAAGGCTACTATGTCATTATTAAG CTACCTTCTGGTCTTCTTTTCTCACTTCCTCTTTATTCTGTTGTGCTTATTTATATGAAGCATCTATTTAAGATATTAAT TGTTTCTCAATTTTTTTATCTCTTCGGTTTTTATCTAATCGCTCACCTACATTTTTGGTGAAAAAGGAGAAGGAGTTGGC TTTAAAAGAGTATCAGTCTTTGGAAACTACAAATAAGCACTTAAAGGCTCAAGTAAGATGTTTTTCTATGGAAGAAATCT TGAAGCTGGGTGTAACTCTCAGTTTACAAAAGAAGTAAATAAACACTACAAAACTGACATTTACTTCCATTTTCAGATAG CCAAGTCAATAAACACTGAAGTGCAGAAAACTCCTGTTGAGCAGGAGTCATCTGTGGCTGAGGTAGCACCTGTGTATGGC AATAGTCCATGGTTTCTTTATAACCATTTTCCAGTTACACAGTTATTTTGGCCCTCCATCCTTCAGTCTCCTAGTCCAGT TCAATTACAACATACACCATTTAATTCGATTGCCATTCCACCAAATGTTTATGTGCCATGTTCTTCTGAGTCTGAATCAC ATCACAAGCAAAATAACCTTATTGACAATCGAACGCAAAATCCATTGTACATGTTTCCATGTCCTTGGTTACACCCTCTC CCAGAATTTGGAAATGGACAGTCACCACCTTCCACTAGCTTGAAAGATAAACTTGATAAACCTCCTGGTAAAAATTGTCG TACTAGTTTATCATTAAATACAGCGGCAAACGTGGATTATCAACCAGCTCCACCTATCAAACTTAAAACAGAAGCTTCTG GCTTGACAGAAGCCAGATCAGTTAATGGCCCAGTACACGCAACTCCAAGTTTTTCTTTGGATGGAGGTGAGCAGAAATCA AAATGTCACATTGTAGAAAAGTTTAGACGACCGGCACTTGGTTGTAACGGTCATGCTTCTGCTGTCAAGCAAGAACCAGA GCTTCAGTTACATTCTGCTCCCAACACTAAGGCATCTTCAACAGCTTCTCATACTGCAGCTTCTTCACTGGAAAGGGAAC AAGAACAGTTCACATCCCTAGGTCAAAATCTAGTGGATGCAGTTGCTGCAGGAGAGGCAAGAAAGAGGAGAAAGGAACTA ACAAAGCTAAAAAGCATCCATAATCTCCAGTCCCGGATGGAGTGTTGACTTCTCTAATAAACTTGGTTAAATAGTTCAAA AAGGGAGCAAAAGTTCATCCATTACAGATTTTGAAGCTTCAATGATAAATAAGTTTTTGGAAGTTGAGCTGAATACAGGT TAACTAAATCCATTGATGGCCTTAGAAGGAAGAGAATTGAAGTCCAAAATCCAAATCATGTACAGCACTGATGACATTAT AGGTTTAAGTTTTTCTTCATTAATCTTGCTTGTTTCTTTTTTTATTTACTTCCTATACTGGGAATTTTGTTTCCCTCCCA GGGAAGAGAAAGGGTAGGGGAAGTTGGTTTTTTAAAGTGGTGAAACTGATCAAATTTTTTATTGGTCAATTTTATGATCC GGATTATTCAACTTCTAACGTTGTTTCTGAGCAGACAGTCTAAATTTCTCTTCCCATTATCTAAAGCAATTAACTAACAT AAATTTACACTACAGGAGAAGAAAGAATGAAAAATTCTAAAACTGAAATTCCTATATCATGTAATATGTTCACTTGAGGC TCCGGTTCAATATTGTGGCTTAAAAACTACTATCGGACTCCTAACACTGTGTTTAGAGTCACTCCATTCAAGTGATGCAG ATAATAACAGTGTCCCATCTGGCATTGGAGGCCCGTTCAGGACAACCTTGAATGACAGGTCTTGGTGCAACTGTCTAAAT TCCAATGTATCCGGGACGACCTTCACTGTAAGACCCTTGGGTGCTGTGACTTTAGCCTTGTACGTTGAATTTGCAGATCC TACATTAGTCACAGTCCTGAAAAAAACTGCAGAAATTCTGGAACTGGCACCCAGGAGCTGGACATGCATGCTGGGGTAGT TGAGTCCATCTGTGCCAGGTGCAGGCTTAATGGTTGTGCAGTTGAAACCTCTTGTGCCAATTAATATACCTATGCTAGTG CTGTTGTAGCCTTGCTTGCACAAGAAGGAAAGGTAGGAGTTCATTCCAATGTCATAGAGCAGGCCTGGATGCAAAGCACT AACTGGGCTAATCTGTCCTGACCCAGATCCCAGCTCCGTGAAATTGTCATTGATTTTCAAAGGAGTTGC
CDS sequence (LotjaGi1g1v0677900.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGACGTGGATTCAGATAAACGCTCTTCTTCCTCTTTCTCTTTTTCTTCTTCTCCTTCTTCTTCGCCGTCGTGTGCCTC GGAGGAGGAGATTGAGGCGGCGGAGACTCTTGCTCACTTGGCACTCCGCCATGTTGATGATAAATGTTGCACCACCGCTG CCAATAACGCCATACGTCACTCGCCGACTCCTCACACTCTTATCACCCCTGCGGGCCAAGGTGTTGCAGGTCAGCAGCAG CTAGATGAGAAGATGGAGCATGATGACTGTTTGGGACCTGTGAAGGTGGAGCAGGATGCTGAATTACCTACTAGGACTAC TACAAGCCACTCTTCAGTTCGCTGTAGCAAGTCGAGGCGTAATTTGACTGAGGAGGAAAAAGAAGCGCGGAGGATACGCA GGGTGTTGGCAAATAGAGAGTCAGCTAGGCAAACAATTCGCCGTAGACAGGCTCTGAGTGAGGAGTTAACCAGAAAAGCT GCCACTTTACTTATGGAGAATGAAAACCTAAAGAGGGAGTTGGCTTTAAAAGAGTATCAGTCTTTGGAAACTACAAATAA GCACTTAAAGGCTCAAATAGCCAAGTCAATAAACACTGAAGTGCAGAAAACTCCTGTTGAGCAGGAGTCATCTGTGGCTG AGGTAGCACCTGTGTATGGCAATAGTCCATGGTTTCTTTATAACCATTTTCCAGTTACACAGTTATTTTGGCCCTCCATC CTTCAGTCTCCTAGTCCAGTTCAATTACAACATACACCATTTAATTCGATTGCCATTCCACCAAATGTTTATGTGCCATG TTCTTCTGAGTCTGAATCACATCACAAGCAAAATAACCTTATTGACAATCGAACGCAAAATCCATTGTACATGTTTCCAT GTCCTTGGTTACACCCTCTCCCAGAATTTGGAAATGGACAGTCACCACCTTCCACTAGCTTGAAAGATAAACTTGATAAA CCTCCTGGTAAAAATTGTCGTACTAGTTTATCATTAAATACAGCGGCAAACGTGGATTATCAACCAGCTCCACCTATCAA ACTTAAAACAGAAGCTTCTGGCTTGACAGAAGCCAGATCAGTTAATGGCCCAGTACACGCAACTCCAAGTTTTTCTTTGG ATGGAGGTGAGCAGAAATCAAAATGTCACATTGTAGAAAAGTTTAGACGACCGGCACTTGGTTGTAACGGTCATGCTTCT GCTGTCAAGCAAGAACCAGAGCTTCAGTTACATTCTGCTCCCAACACTAAGGCATCTTCAACAGCTTCTCATACTGCAGC TTCTTCACTGGAAAGGGAACAAGAACAGTTCACATCCCTAGGTCAAAATCTAGTGGATGCAGTTGCTGCAGGAGAGGCAA GAAAGAGGAGAAAGGAACTAACAAAGCTAAAAAGCATCCATAATCTCCAGTCCCGGATGGAGTGTTGA
Protein sequence (LotjaGi1g1v0677900.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MDVDSDKRSSSSFSFSSSPSSSPSCASEEEIEAAETLAHLALRHVDDKCCTTAANNAIRHSPTPHTLITPAGQGVAGQQQ LDEKMEHDDCLGPVKVEQDAELPTRTTTSHSSVRCSKSRRNLTEEEKEARRIRRVLANRESARQTIRRRQALSEELTRKA ATLLMENENLKRELALKEYQSLETTNKHLKAQIAKSINTEVQKTPVEQESSVAEVAPVYGNSPWFLYNHFPVTQLFWPSI LQSPSPVQLQHTPFNSIAIPPNVYVPCSSESESHHKQNNLIDNRTQNPLYMFPCPWLHPLPEFGNGQSPPSTSLKDKLDK PPGKNCRTSLSLNTAANVDYQPAPPIKLKTEASGLTEARSVNGPVHATPSFSLDGGEQKSKCHIVEKFRRPALGCNGHAS AVKQEPELQLHSAPNTKASSTASHTAASSLEREQEQFTSLGQNLVDAVAAGEARKRRKELTKLKSIHNLQSRMEC
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 30 | 30 | - | – | |
| SignalP_GRAM_POSITIVE | 1 | 26 | 26 | - | – | |
| MobiDBLite | 8 | 27 | 20 | - | – | |
| PANTHER | 98 | 463 | 366 | 2.4E-46 | – | |
| PANTHER | 98 | 463 | 366 | 2.4E-46 | – | |
| MobiDBLite | 102 | 125 | 24 | - | – | |
| MobiDBLite | 102 | 116 | 15 | - | – | |
| SMART | 126 | 195 | 70 | 1.4E-6 | ||
| ProSiteProfiles | 128 | 175 | 48 | 9.036 | ||
| SUPERFAMILY | 130 | 176 | 47 | 7.31E-5 | – | |
| Gene3D | 130 | 180 | 51 | 3.6E-5 | – | |
| CDD | 131 | 176 | 46 | 6.31486E-13 | – | |
| Coils | 153 | 192 | 40 | - | – | |
| MobiDBLite | 303 | 324 | 22 | - | – | |
| MobiDBLite | 404 | 433 | 30 | - | – | |
| MobiDBLite | 409 | 433 | 25 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | DNA-binding transcription factor activity | A protein or a member of a complex that interacts selectively and non-covalently with a specific DNA sequence (sometimes referred to as a motif) within the regulatory region of a gene to modulate transcription. Regulatory regions include promoters (proximal and distal) and enhancers. Genes are transcriptional units, and include bacterial operons. | ||
| Biological process | Regulation of transcription, DNA-templated | Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription. |
Expression pattern of LotjaGi1g1v0677900.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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