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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0679500 |
| Transcript ID | LotjaGi1g1v0679500.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Trihelix transcription factor GT-2; TAIR: AT5G03680.1 Duplicated homeodomain-like superfamily protein; Swiss-Prot: sp|Q9LZS0|PTL_ARATH Trihelix transcription factor PTL; TrEMBL-Plants: tr|A0A151TVI5|A0A151TVI5_CAJCA Uncharacterized protein; Found in the gene: LotjaGi1g1v0679500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:124666446..124670500) extracted from Lotus japonicus Gifu genome v1.2.
GTCAATTGAGTATAGCCGGAGATCCATATTGTATTATTACTCGACTTATAAATATTGGGAAGATATAAAACACATCATCT TTATCTATGTTATTCCTTTTTATCATACATCATATTCATTACTTCTATTTCATCTCTTCCTTTTTGGTTGTTTGATGGAT GTCTGCGCTATGTATTTCTCTACGAAATCTTTTCATCAACATCAATCTCTCTCATGTATATGATACAGCACACGCATAGA TACATACACACACTTATGTAAAGAGACATATGGGACCATTTCACTGCGCTTAAAATTTGATCTTTATCGTGGACGACAGG ATCCGACTCTGCCGCTTGACACCTCCCTCTCCATATCGATTCTTCAAACTTTTTCTCATCAATCTTCTTATTCCTTCCTC ACTCATCACTTTTTCTCACCTTAATCACTCTCTCTTCGTTCCATCTCAATCTCTCAAACAGTAACTAACTAAGTAAGTAC TATACTCTCATCACTCTCATGGAAATGGATGATCATCAAAATCATCACCACCACCATCAACAGCAACAACAACAACAACA GTACTCTGATCTCAGGTACACTCATTTCCCCTCTATACCACCACAGCCCACGGCGGAGCTCTTCCCCGCCGGCCACCCGA ATCTAACACCCGCCGCCGCCGCTGCAGCACACCATCACTATGAGATGATGATGTTTGGTCGTGATATAATGCCTCGTTGC CTTCATGACTTTGCCTCCACTGATTCTGCTGCTGTTGCTGCTGCCGCCGCCATCAACACTAACATGACCTCCGCCACTCC AGCCACCACCAACAGTGCTTCAACTCCGCCACTTAGTGGGTTGGAGGCTGAGGCTGCGGTTGACGCCTCCACTGGAAGAT GGCCAAGACAGGAGACTCTTACTCTTCTTGAGATCAGATCTCGTTTAGACCCTAAATTCAAAGAGGCTAATCAAAAGGGT CCTCTATGGGATGAAGTTTCTAGGTACAAATTCATTATTCATTATTATTATTATTTTTTTTCCCTAGTTCAAACAGTACT CATCTTAATTATATATGTTTTCAACTTCTTTTTTATTTTTTATTTTTTATACTCAACTTGAACACATGAAAATGATTCAA TTGTTTGTTTGTTTGGGTTTGGAGAAATGGATGGACAACAATGGAAATATGATAATTGCAAGTTGTAACTTCATGACAGT TTTCCTACTAAGATGGCTGCACTTGGTTTGTTTTCTTTTTTAATTTGGTTACTTGCTTTTGTTTCTGGAAACTCTGATGT ATGGGCAGTGAGCAATTTTGTTAACCTTCTTTCACTGGAAATGACTCTACACACTGGTATCTCTCTACTCAGTTTTCGAT TATTGATCATTGTGTACTTGGAAGTGATTAAATTCATCTACCAAGATTAGTACGGCTCAACCAATGGCCCCTTTTTTTCT TTATTGAAATTTTGTACCCCTTTTTAAGTGCAAGTGCTTTTTCCCTTTTATCACTTCATTTTTTTTCTCTCTTGTTCAAA ATTCATTGAACTTTTGGATCCTTTTGGTTGCACCTATTTTTCTTTTTCTTTTTTCTTTCTAAATTCTATATCCTAATTGG CTTTGTTGTATTTGCTAAAACTAGGTACCATTAACATAGAAAAAGTCAGTGCATGAGATTGCATATCATGTTCCTCTTTG GTCTAGGGTTCCATACATCTACAATGAGCTCACCTCTTAGCCTTTTGCCGTTTTTCTTACTCATATTGATATTTGGTGCA AATTTAGATTCACAGTCTAAAATATTAAAGCAAAATCACAGTGAACAATCAAAAATTAAAATAAATTGTTTCTGTCCATC ATGATTTTACCTCATTGTTTTTCATATCTATACAAACATGCACTTATATTATATTTATCACTTTTTTTTCTTCTCTTGCT TTGTCACTCTTGCTGTCTGTTGCGTGTTTGTAATGTGGGATTATCGACCAACCATTAGTCTCTTTCCTTAAACTCATTTT GTTTTGCTTGTTTTGATGTTGTTCCTCATCATCAGGATCATGTCTGAAGAACATGGATACCAAAGGAGTGGGAAAAAGTG CAGGGAGAAGTTTGAGAACCTATACAAATATTACAAGAAGACAAAAGAAGGAAAAGCAGGAAGACAAGATGGGAAGCATT ACAGATTCTTCCGGCAACTTGAAGCCTTATATGGTGAGAACAGTAACAACACAGCCTCACTTCCAGAAACCAATTTTGGC GGCACCACCGTCCGGTTCCAAACAAGCAACAACCACACCCTTTCTCAAACAAACCAAGACATGTTCCATTCTCATCAAAA GCACTGTGATAGCCTCAGCCTCACAAACTCCACTGACTTTGACTCCACATCATCAGAGGACAATGATGATCATAGCAATG TGGGACTCAAGGACAATGATTCCATGGAGAAGAGGAGAAAGAGGAGAAGCTGGAAGGTGAAGATAAAGGATTTCATTGAC TCTCAGATGAGGAAGCTGGTGGAGAAGCAAGAGGAGTGGTTGGAAAAACTCACTAATACACTGGAGCAGAAGGAGAAGGA GAGGGTTTTAAGAGAAGAAGAGTGGAGGAGGCAAGAAGGAGAAAGGTTGGAGACGGAGCACAAGTTTTGGGCTAAAGAGA GAGCATGGATTGAAGCAAGAGATGCTGCTTTAATGGAAGCTTTGCAAAAGCTAACAGGAAATGAAGTAGTTATAAAGACT CAATCTCATCATGAGGGTATAATGGGAACTGGCATAATTCAAAACCAGAATAATGAAGATGCTGAAAGCTGGCCAGAATC TGAGATCACAAGGCTTGGACAGTTGAAAACTGAGATGGAGGCAAGGATAAGGGAAAGTGGGTGTCCAGAAGAGGTTATGT GGGAGGAAATAGCTACCAAAATGGCTTGTTTTGGATATGAAAGGACTCCTTTGATGTTCAAGGAGAAATGGGAAAGTATG AGCAACTGTGCTAGGAATATTGCCAAGGACATTGGAAACAAGAAGAGGAAGGAAAACTCAAGAAGTTGTTTTTACTTTGA TAATAACAATGATCACCAGTCTTCTCTATATAACCAAGGAGGTGCCTTTTGTGATGTCAATGATCAAAGGCAAGGGACTG GGAGGCTGCAAACAAATGATGGTTCTTCACCTTCTAATTCTAATGTTGGAAATGTTGTTGGGGCTGAGAGCTGCTTCCCC TTCTTGATGAGTGAGGGGGGAAATTTGTGGGAGAACTACAGCTTAAAGATGAACAAAGCAAACCAAAACTAATTAGTGCA TGCTTGGATACTCGGTAGATTTTTCAAGTTGGAAGAAAAATTGATTCTGTATGAAGTTGCTTCTATTAACTTTTGTCGGA GCAAAATTTATTTTGAAAGATCTGAACTCTATGAGTGAACTAAGGTTGACTCGTATGAGGCATTAATGTTTCACAGCCTT TTATGTAAGATGATCTCACATTTATGTAAGCAAGAACTAACTGAAGTTTTTATGTATAGAGACTGATGATGCATGTCAAT CTTATAATATTTATGGGAATTTAGGTGAAAAATAATGTGTTCAAGCCACAAGTTTAATGAGAGGGAGAGACATGTTGGCA ATATCATTGAAGTGTTGGGGTATGGATATATGACACTAATTCAGGTGAGTTTTCTCTCCAGCCAGATTTCTTCTATGCGT GTGCAAATGGAATTGCAATTGTTTTACTTCACATGTTTCCTTACTCCTCTGGCATGTTTCTTTTTGTGTAAGTTTGGGAT ATTGAACAGTGCAGGCCTTTAGAGTTTATTTGCTGAAGGCGTGTAATTAAGGTAGCAATTTCCTTAATATTTTAAGGAAT GGAGAGAGATTGATGTATTAACGGATACTGTTTAAGCAATGGATTTTTTTTTGTTTTTTGAAACTTGCAATGGATATTGT TACTACCATATAAAAATAGGCCTAAATTTTTTGTTTGTGAAAGATCGTTTGAATTATAGAACAAGCATTTATTGATACTT ACTTGTCCAGATTAGGGGACTAATGAATAGTAACAGCTCTCGTGCGTGTGTTTTT
CDS sequence (LotjaGi1g1v0679500.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAAATGGATGATCATCAAAATCATCACCACCACCATCAACAGCAACAACAACAACAACAGTACTCTGATCTCAGGTA CACTCATTTCCCCTCTATACCACCACAGCCCACGGCGGAGCTCTTCCCCGCCGGCCACCCGAATCTAACACCCGCCGCCG CCGCTGCAGCACACCATCACTATGAGATGATGATGTTTGGTCGTGATATAATGCCTCGTTGCCTTCATGACTTTGCCTCC ACTGATTCTGCTGCTGTTGCTGCTGCCGCCGCCATCAACACTAACATGACCTCCGCCACTCCAGCCACCACCAACAGTGC TTCAACTCCGCCACTTAGTGGGTTGGAGGCTGAGGCTGCGGTTGACGCCTCCACTGGAAGATGGCCAAGACAGGAGACTC TTACTCTTCTTGAGATCAGATCTCGTTTAGACCCTAAATTCAAAGAGGCTAATCAAAAGGGTCCTCTATGGGATGAAGTT TCTAGGATCATGTCTGAAGAACATGGATACCAAAGGAGTGGGAAAAAGTGCAGGGAGAAGTTTGAGAACCTATACAAATA TTACAAGAAGACAAAAGAAGGAAAAGCAGGAAGACAAGATGGGAAGCATTACAGATTCTTCCGGCAACTTGAAGCCTTAT ATGGTGAGAACAGTAACAACACAGCCTCACTTCCAGAAACCAATTTTGGCGGCACCACCGTCCGGTTCCAAACAAGCAAC AACCACACCCTTTCTCAAACAAACCAAGACATGTTCCATTCTCATCAAAAGCACTGTGATAGCCTCAGCCTCACAAACTC CACTGACTTTGACTCCACATCATCAGAGGACAATGATGATCATAGCAATGTGGGACTCAAGGACAATGATTCCATGGAGA AGAGGAGAAAGAGGAGAAGCTGGAAGGTGAAGATAAAGGATTTCATTGACTCTCAGATGAGGAAGCTGGTGGAGAAGCAA GAGGAGTGGTTGGAAAAACTCACTAATACACTGGAGCAGAAGGAGAAGGAGAGGGTTTTAAGAGAAGAAGAGTGGAGGAG GCAAGAAGGAGAAAGGTTGGAGACGGAGCACAAGTTTTGGGCTAAAGAGAGAGCATGGATTGAAGCAAGAGATGCTGCTT TAATGGAAGCTTTGCAAAAGCTAACAGGAAATGAAGTAGTTATAAAGACTCAATCTCATCATGAGGGTATAATGGGAACT GGCATAATTCAAAACCAGAATAATGAAGATGCTGAAAGCTGGCCAGAATCTGAGATCACAAGGCTTGGACAGTTGAAAAC TGAGATGGAGGCAAGGATAAGGGAAAGTGGGTGTCCAGAAGAGGTTATGTGGGAGGAAATAGCTACCAAAATGGCTTGTT TTGGATATGAAAGGACTCCTTTGATGTTCAAGGAGAAATGGGAAAGTATGAGCAACTGTGCTAGGAATATTGCCAAGGAC ATTGGAAACAAGAAGAGGAAGGAAAACTCAAGAAGTTGTTTTTACTTTGATAATAACAATGATCACCAGTCTTCTCTATA TAACCAAGGAGGTGCCTTTTGTGATGTCAATGATCAAAGGCAAGGGACTGGGAGGCTGCAAACAAATGATGGTTCTTCAC CTTCTAATTCTAATGTTGGAAATGTTGTTGGGGCTGAGAGCTGCTTCCCCTTCTTGATGAGTGAGGGGGGAAATTTGTGG GAGAACTACAGCTTAAAGATGAACAAAGCAAACCAAAACTAA
Protein sequence (LotjaGi1g1v0679500.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MEMDDHQNHHHHHQQQQQQQQYSDLRYTHFPSIPPQPTAELFPAGHPNLTPAAAAAAHHHYEMMMFGRDIMPRCLHDFAS TDSAAVAAAAAINTNMTSATPATTNSASTPPLSGLEAEAAVDASTGRWPRQETLTLLEIRSRLDPKFKEANQKGPLWDEV SRIMSEEHGYQRSGKKCREKFENLYKYYKKTKEGKAGRQDGKHYRFFRQLEALYGENSNNTASLPETNFGGTTVRFQTSN NHTLSQTNQDMFHSHQKHCDSLSLTNSTDFDSTSSEDNDDHSNVGLKDNDSMEKRRKRRSWKVKIKDFIDSQMRKLVEKQ EEWLEKLTNTLEQKEKERVLREEEWRRQEGERLETEHKFWAKERAWIEARDAALMEALQKLTGNEVVIKTQSHHEGIMGT GIIQNQNNEDAESWPESEITRLGQLKTEMEARIRESGCPEEVMWEEIATKMACFGYERTPLMFKEKWESMSNCARNIAKD IGNKKRKENSRSCFYFDNNNDHQSSLYNQGGAFCDVNDQRQGTGRLQTNDGSSPSNSNVGNVVGAESCFPFLMSEGGNLW ENYSLKMNKANQN
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 23 | 23 | - | – | |
| PANTHER | 17 | 569 | 553 | 6.2E-207 | – | |
| PANTHER | 17 | 569 | 553 | 6.2E-207 | – | |
| ProSiteProfiles | 120 | 185 | 66 | 7.108 | ||
| CDD | 127 | 192 | 66 | 1.44618E-20 | – | |
| Pfam | 127 | 213 | 87 | 7.6E-20 | – | |
| Gene3D | 128 | 191 | 64 | 1.2E-23 | – | |
| MobiDBLite | 267 | 293 | 27 | - | – | |
| MobiDBLite | 274 | 293 | 20 | - | – | |
| Coils | 317 | 344 | 28 | - | – | |
| ProSiteProfiles | 406 | 471 | 66 | 5.796 | ||
| Pfam | 413 | 497 | 85 | 5.6E-9 | – | |
| Gene3D | 414 | 475 | 62 | 1.4E-16 | – | |
| CDD | 414 | 472 | 59 | 6.15311E-15 | – | |
| MobiDBLite | 519 | 538 | 20 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi1g1v0679500.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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