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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0691600 |
| Transcript ID | LotjaGi1g1v0691600.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | V-type proton ATPase subunit G; TAIR: AT4G23710.1 vacuolar ATP synthase subunit G2; Swiss-Prot: sp|Q9SP55|VATG_CITLI V-type proton ATPase subunit G; TrEMBL-Plants: tr|I3S3N8|I3S3N8_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0691600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:125972057..125976851) extracted from Lotus japonicus Gifu genome v1.2.
TTTTTTTTCTTTTTGTCAAGAATAAAATTTCTCTTATACTATTTATCTATAAAATTAATTAAAAAAAAAATCACTAAAAT AAACGTATAAAGGTGTTTTGGGTTGATTGGGCTGTGAATAACCAAATCAGCAAAGAAGTCCTCCAGTTTTCGTTAGACAG AGCGAGTGGTGCAAAGTTTTCCAGATCTCCACTTTCTTCTGAATCCAAATTCCCGATACGATAGGTACCTCTCTCTCTCT TTCTTCCACTTTAGATCTACGATTTCAATGCCAATGCAACCATTTTCGGCTTTGATCCACTTTCCTATAAACCTCAACCT GCTTTCGTTTTCGATCACTCGTCTCGTGGTTTGGTTTCTCTAGGGATTTCTGTACTCAATTAAAGATTGAATTCATCGAA TTGTATTGGTAATTGAAGGCATAGGATATTTTGCTGATGGTTTATTTGAAATTACTAGTGCTGATATTTCATAGTGTAGG TACTCATAACTCTCTGTTCATTGCTCTTTAACCAAAAAGCCAAATATTCTGATTCTATTAGACTTTGCATTTTGAGTTTG GATGGATCATGGATGTAATCAATTTGGATTCTTTGTGTGTCTTGCCTTTCAATTGGAAAATGAATAGATACAATAGTGAG TAAAATTGACATGCATGACAAACATAGTGTGCTTGATTTGCTAAAGAAGTGAATTACTCAAAAAGAGTGAATAAGATTAT CCAGTGGATTATTTTTGTTCAGTTTAAGTGCGTGTTTGGATAGCACTTGAGTGTTATGTGAATGTACTTTCATTCCAATT CATAAGAAGAATTACATTCACTTTTTATTTCGAAGTGAGTGGTAACGCTCATTTGGATAGGTGCCGACATGTATCCGAAC ATAGCATTAGTGTATCAACATAATAGTTTTAGGTTTTTTTTCTTTCTCTTTTCTAGTGACAATCACAGTGGTTTTTTCGC AAAAGAATTTATCTTTTTTACTGAAGGACTTACTGTTTTGTTTACTTTCTCAGAGTTTCATTTGATCTTATGTTAATAGC TACTAACTGATTCCATCACAGAATGGCATCCAACAGGGGTCAAGGTGGAATTCAACAGTTGCTGGCTGCTGAACAAGAAG CACAACGGATCGTGAATGCTGCGAAAAATGGTATTGATGCTCTATTTTAGTTCTGCCTGTTTGTTTGCTATGTCCCCACT AAATTCTTCTTAGAATTCGGGTTAGGCCTAACCCTACCCAAAAGCTAGCTTAAAAGTGAGGATTACTCTACCCTATATAA AGACTTATTTGGTTCTATCTTTAGTAAATGTGAGACTTCTTAACAATTCTTGATCCATTATTGTGTTATCTTTAAAGTGT CTCACCATATCATTTTATGTAAAGAGAATTTTCTTCTCCTTGTTACAAATTCTGAGATATTGCTTCTATAAACTAGTCCC CTTCTCCACACATCCACCATCTATTAGTTTTTGCTTTTTATTGTTAGTCAACTTTTGTCAAATCTCTTATGAGTACACTA CTAATCAGTACTCTGTATCTACTGTAGAGAAATTGGCTAGACTGAAACAGGCCAAAGAGGAGGCTGAAAAGGACATTGCT GAATATAGAGCTCATTTGGAACACGAGTTCCAAAAGAAGGTGTCAGCGGTGAGTCTACAACTGACTACTGCATTAGAATT CTGATGCTTCTACCTTTCTATGTAATTCTGACTCTGTGCACTCTTTTCTGTAATCCTATGAATACAGAGCAGTGGAGATT CTGGTGCTAATGTCAAGCGACTTGAGCAAGAGACAGATGCAAAGATTCAACACCTGAAAACTGAGGCTGGGAGAATATCG CAGGATGTTGTCGCCATGCTCCTCAAGTATGTGACAACCGTGAAGAATTAGAATCCTTGATGGGCTCTGGGAAATATTTA GTCATGCTCTGAATGTTATCTTATATTTATTTGACGACTCTGGGTTCTAGTGCGGTTCTGATTGCTTCATTTATAATACT TGATACCTTGCTGCCATGTATTCAAATTGCTTTCAAGTTTGTTAAAATAAACAGTTCAGAATTCATAGACACTCCTATGT GTATCACCGCTTCATCAGAGGTGAATGAGGACCACTCTTTCAGTGTATATCGAGTAAAGCCGGAATTACTGGTTTATTCT TTTATAAACTCCATTTTTCCTACCAAGTATTAGCTTTGAGGAGGTGTCTGTTTGATGCAATTGAGCAATAGGTTGAAGCT TTGTTTGGAAATAACGAAATACGATGGGGTGCATCATGCATGCACTTCCAAGAGTGAAAAAAATTAATTTATGATGCAAA AAAAAAGGAGAGACTATAAACACTGGTAAAAATTGATCAACTTCAATGATGCTATGGACATTTTGGCATGATTCTATTCA GCACCAAAACCTCAGAATTGTAAATCTAACGTGCGAGATTGGTAGTACTCCACATGGAGCTTGAAAAATTTGCTGTAGCA GAACTTGATTCTTCTAATGTTTGCGCTTGCTGCCTCTTTCTGATGTTGCTGACAAATCCTGGTTTTGAAATATTATGACC GTCTTCTTCCATATCAATACTGTTGGTCAGCATCTCTACAACCTCAGACATTCGTGGCCGAAGCTTGGCGGTTTCTTGCA CACAACGCAGTCCAACCACTAGGAATCGTTTTGCTTCTTCAACCGGAATATTCATATTCAACACTGGATCCACCATGCTC AATAGATCATTACCTTCATACGCTTCCCAAGCCTGCAAATTAAACATGTTCACACAACCACAACTTACAGAGACACAAAT CATTTAACAAGGATCAGTTGAAACTATAAAACATGTTAGTATGTGTCTAGATCAGCGTTGCTTGAATCAAAATTTATTTT ACCTGCTCTACTAAAAATTGTTCCATATCCTGATGATAATCTACTACTTCTCTGCCACTGACAATTTCTAAGAGTAGTAC TCCAAAGCTATAAACATCTGATTTTCGTGTTAGCTGTCCAGAACTGGCATACTCTGGAGCAAGATAACCCCTGTAACAAT TTAAATGAAAAAAGTCAAATTTTCTATTAGTCAAGGTTGTTTTGTTGGTATGTTAGCTAGTGAGGTCACTCACAATGTCC CTGCAACTCGAGTACTTATGTAGGATTTTTCATCTTTTAGTAGCTTTGCCAAACCAAAGTCTGAAACTTTTGGTGTCAAA TTTTGATCAAGAAGGATATTGCTTGCTTTGATATCCCTATGGACAATATGAGGCTTAAGTTCCTCATGGAGAAAGGCAAG CACCTTGGCCACACCTATGGATACATCCCTCCTTACTTCCCAGCTAAATCTCACCTTGTTATGCTCTGAACCTATCAATC AAAATTCACAACCAAACCAAAAGAGAATCATTTCTGGGCCTGCTTCTATATATCCTCTAATTTAATCAAACATTTGCTTG GAATTGGATTTCAATTCAATGGCTAAGAATTCTAAAATGCATTTTGCTTTGGAAAATGTTTTGACAAAGACAGCAAGTTT GCTCTTATTAATAAAATGGTTGATAGGTCCCAAAGACAAAATCAAACATACTAATAGCAACATGGATCATCTGCCGCCAC CATACTCTTTGCAGCTCTCTGATGCAAATTCTTAACTCTGAATTCTTATCTTAAATTGTCCGGATTGATTCATAAAAAGG TAAATTGGTCAAAACTCTTATACACTTGTCATTTTGCTTCTGCAGAGACAACAGAGAATCCAAATTCTACTAATAGTGCG TTTGGATTGATGTTGTGAACAAATGCTACAGTTTCTAGCTTCTTGACAAAAAGTGATTATGAGGTTTTTTACCGTCGAAA CAAACACGCTATAAGTGCAAGTTTGAAAATTGTTCTTTAATTTGATTTTGGAGTCAAAGTCCATTTTGGGAGAAAAACGT TTTTCAGTAGCTTCTTACGATTACGAAGAGAATTAATTCTGAAAAAATAGAAGTTGATTCAAACAGATAAAATTCACCTA AGAAAGTGTGGCGAAGGCTGTTGTTTTCCATGTACTCATAGACTAAATATCTGTGGGCTCCTTGGACACAACACCCCCTT AGAAGGACTAAATTTTGATGCTTGATGTTTGCTAGTGTAGCCAATTCTGCTATGAACTCCCTCTCTCCTCGCAACGATTC CAGCTCAATTGAAATCACTTTCACAGCCACCAAAGTGCCATCTCTAAGCTGCCCCTTTACAACAACAAGAACCCCATTTC AGATCCAGCATTCAAAAATTCATTAATGGTTTATTATAGTCAGCCAACTTGTTAGGCCTAGTGTACAATATCAAATTGCA AGTTTTCTTAAATGCAGTAATATTGTATTAACATAACAATATGAAAATAATGATAACATATAGAACCTTGTAGACAGAAC CAAAGCCTCCTTCTCCAACCTTTTCCGAGTAGTGAAAACCACGGGTGGCAGATTTCAATTCGCTATAAGTGAATATGCGA AAGCTTCCATCATTATCTTCCTCTAACTTTTCTGTTGGACACAAATACAATGAAGTTTAGATATATATGAACAGTTAAAA CATCATTAACATGGTTTATAAGATGTCCGTACCGTGATTGGTAATTTGTTCTTTGACCGGTGCTGAGAAACAACTAGAAA ATGAACAAGGATTCTTCATGATCTTGGTGTGTGATTGGTGAAGGGTTTGGAAATGGAAGCCGATTGAAGAAAGAGCATGT TAAGGGGACAAAGACGATGACTCGATTGGAAGTCGGCACACATAGGTAGCTTGTCAGGTTGAGACAAGATTTTCT
CDS sequence (LotjaGi1g1v0691600.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCATCCAACAGGGGTCAAGGTGGAATTCAACAGTTGCTGGCTGCTGAACAAGAAGCACAACGGATCGTGAATGCTGC GAAAAATGAGAAATTGGCTAGACTGAAACAGGCCAAAGAGGAGGCTGAAAAGGACATTGCTGAATATAGAGCTCATTTGG AACACGAGTTCCAAAAGAAGGTGTCAGCGAGCAGTGGAGATTCTGGTGCTAATGTCAAGCGACTTGAGCAAGAGACAGAT GCAAAGATTCAACACCTGAAAACTGAGGCTGGGAGAATATCGCAGGATGTTGTCGCCATGCTCCTCAAGTATGTGACAAC CGTGAAGAATTAG
Protein sequence (LotjaGi1g1v0691600.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MASNRGQGGIQQLLAAEQEAQRIVNAAKNEKLARLKQAKEEAEKDIAEYRAHLEHEFQKKVSASSGDSGANVKRLEQETD AKIQHLKTEAGRISQDVVAMLLKYVTTVKN
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 110 | 110 | 1.3E-55 | – | |
| Gene3D | 1 | 62 | 62 | 3.4E-18 | – | |
| PANTHER | 1 | 110 | 110 | 1.3E-55 | ||
| TIGRFAM | 3 | 109 | 107 | 6.9E-23 | ||
| Pfam | 7 | 109 | 103 | 4.7E-33 | ||
| Coils | 10 | 59 | 50 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Vacuolar proton-transporting V-type ATPase complex | A proton-transporting two-sector ATPase complex found in the vacuolar membrane, where it acts as a proton pump to mediate acidification of the vacuolar lumen. | ||
| Molecular function | ATPase activity, coupled to transmembrane movement of substances | Catalysis of the reaction: ATP + H2O = ADP + phosphate, to directly drive the active transport of a substance across a membrane. | ||
| Biological process | Proton transmembrane transport | The directed movement of a proton across a membrane. |
Expression pattern of LotjaGi1g1v0691600.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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