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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0707000 |
| Transcript ID | LotjaGi1g1v0707000.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Glycolipid transfer protein domain-containing protein; TAIR: AT2G33470.1 glycolipid transfer protein 1; Swiss-Prot: sp|O22797|GLTP1_ARATH Glycolipid transfer protein 1; TrEMBL-Plants: tr|A0A1J7HEK5|A0A1J7HEK5_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0707000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:127545647..127548334) extracted from Lotus japonicus Gifu genome v1.2.
CTGAAGTACCAGAATTAACGGTATTTGTGTTTCTGAGATGTGACAGACAGAAACGGCGGCAATGCTCACGTCGTGAACAG GTTCATATTTATGAACAAATTTTCAATTTTCTTTATAATTCAAACCCGGATGATTGGTTGGTTTTGCCATGCATGAATCT TCAAATTGAAATTAGATCGCAATAGAAACAGTAATGTGTTATTTTCTAGCTTAGATGAGTTTTCTCTTGAATAAACATTT GTGATGGTTTCTTATAGGGCTTGATATCACTCTACAAACACATTGAATTTGATTAATTTATGGTCTTAATTTATTTAATT ATTTTGCAAGTGTGTGATTTCAATCAATTGGTTACATGTATAAAAGTCTTTCCACAATTGGTCTAAAGACATAATTATGA GGAAAATCTTATGTGATTGCATATTTGGAAATCCTTTTATATTTGATTCAATTATGGACGGAAACTTATGTGAGTAGCTT ATGTATGTGATAATTGATTATGAGGAAAAAGAAGTTGATCTAAACATAGTTTCTAGGCACCAGAATTGATGATTTTGAGA AGAAAAAAAGCTGATCAGCTAACACAAGCTGTCCATGGAGAATTGAGAATCTGGTTTTGTAGGGGAGAGCAGATTGGCCT TTTAAGATTAAGTGTGCACTGCATACCCCTTCATAGTTGCTGCTAATTACAATTTGACATATTTCAGATTGTGGGATATC ATAGGCAATTAGGCATTGAAATGACATGGAAAAACTTAAGAAACTACATATTGAATTAGGACCATTTTTTTCTTGGTTAT TTTTTCTATCGATTTATTTTCCTGTATAAAAGTGATGACTATGCATGAGATATTTACAGCAGAAGAATGGAAAGATCTGC ATTCAGACCTGCTTTGGAGGGGTTGGAGCATGTTAGGTCTGAAGAAGGAAAGATACTCACAAAACCTTTCTTGGATGTAT GCAAAACTATATTACCTGTTTTAGGTATGTCATACAATGTGGATGCCTTCTACTTGAAACTAATGTCAATTTTAATGGAA AGATAGTTCAATTTTCAAGAGCATTATTATGAAGCTGAATCTTCATTCTTGTGTGTGATTCCAGACAAGTTTGGAGGAGC ATTTACATTTGTAAAATCTGATATTGGTGGTAACATATCGGTAAGCTGAAAACTAGGTTGTTACCTTGATTGATTTTCCT CAATTTTCAGCTCCTCTTCATGCTCCTGTAAATAATCTTCGGTAGCATGTTTAATTACGGATTAGGATCTTCTCCTGTCA CATGACAATGTCAAGTGTAATGTTGTGTCTGTCTCTAATCTGATCTTTGATCCTCGCAGAGGTTGGAGTCTAAGTATCAA TCTGACCCTACCGAATACAAATTCTTATACAGTATAGTGCAAAAAGAGGTTGAAGCTAAAAAACAAAAGGATTCATCTAG TTGCTCAAATAGCCTCTTATGGTTGTCAAGGTATGTGCTATTTGAGCTTTGAGGTTTGTATTAGTGTAGCTGAGATTTAA CCTTAAGGTGTACTTCATAGGAGCATGGATTACACGGTTCAAATGTTTAGCAACTTGCATGAACATCAGGATTGGACCAT GAAGCGTGCTTGCACTGATTCATATAACAAGACATTGAAAAATTGGCATGGCTGGCTAGCTAGTTCGAGTTTCAATGTAA GTTCCCCCGCTTATTTAGTGCCCCTTTTGGTTCAGCACAAATGGGAGAGAATTTGTTGCTTTATAATTCTCTAGTTTATG TCAAGAAATGAGGTTTCTTCATTTAGCTTTAAGATTCAAAATACACAGAATGCTTTCATGCTCTAATTATTATTGAGTCT CACACCACATAGTTTTGTCATTCTGTATAATCTTACATGCCTAATATCTTGTACATATTTTTGCTATGTTGGAAAAGTAT AAGTTGCAAGATGTCATTCTGAAGAGGACTAGTTTAATCAGTAAAGTATCCAAACAAGTATTAGAATTTGAGTTAGGTCT CACTCTACCGCAGAAGCTGGTTCATCACAACATGTAACACTATTCAATTGAATTCCAGGTTGCAATGAAGCTGGCTCCGG ATAGGAAAAAATTCATGGACATGATCGGTGGTACAGGGGATCCAGATTCTGATATGGAAAAATTCTGTGCCAGTTTCTCT TCAGTTCTTGCAGAGAATCATAAATTCCTGGTATCATTTTTTACCATACTTGTGTAATATATGATCCAGAAATCATGTTA AGTTGAAGTTTACCGTAGAAATTGTATAAGCATTATTCAAAATTTATAGAATGTGAAAAAGGTTTTGAAATGACATAAAC TCCATCTCATTGAATGCTTCCATTTTGCTCTTGTTGCAGGCTAGTGTTGGAATGGATAATTTGAAATCTTGACCTGAAGT TGAGTGGTTTTCTCTTCTTTCATTACAATTTACAATTATTTGTCCTGATATTGTAAGGTTGTTGGTATTTGTACACAAGA CACCATAACTTTAAAGTGAACAATGATTGTGTGTATTTGAAAAATGCTGATACAACTCTGTAAATTATGAATTTTCACTT CTATTGTAATTAAACACTGATGGTATCCAACTCAATCTGCTCATCTACATTCAACATTTTTTGTTGTTTAAAGATTTCTT TGTCACTGGTAAGACTTTCCAGTGAGATTTAAGAGAATTGAAGGGACG
CDS sequence (LotjaGi1g1v0707000.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAAAGATCTGCATTCAGACCTGCTTTGGAGGGGTTGGAGCATGTTAGGTCTGAAGAAGGAAAGATACTCACAAAACC TTTCTTGGATGTATGCAAAACTATATTACCTGTTTTAGACAAGTTTGGAGGAGCATTTACATTTGTAAAATCTGATATTG GTGGTAACATATCGAGGTTGGAGTCTAAGTATCAATCTGACCCTACCGAATACAAATTCTTATACAGTATAGTGCAAAAA GAGGTTGAAGCTAAAAAACAAAAGGATTCATCTAGTTGCTCAAATAGCCTCTTATGGTTGTCAAGGAGCATGGATTACAC GGTTCAAATGTTTAGCAACTTGCATGAACATCAGGATTGGACCATGAAGCGTGCTTGCACTGATTCATATAACAAGACAT TGAAAAATTGGCATGGCTGGCTAGCTAGTTCGAGTTTCAATGTTGCAATGAAGCTGGCTCCGGATAGGAAAAAATTCATG GACATGATCGGTGGTACAGGGGATCCAGATTCTGATATGGAAAAATTCTGTGCCAGTTTCTCTTCAGTTCTTGCAGAGAA TCATAAATTCCTGGCTAGTGTTGGAATGGATAATTTGAAATCTTGA
Protein sequence (LotjaGi1g1v0707000.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MERSAFRPALEGLEHVRSEEGKILTKPFLDVCKTILPVLDKFGGAFTFVKSDIGGNISRLESKYQSDPTEYKFLYSIVQK EVEAKKQKDSSSCSNSLLWLSRSMDYTVQMFSNLHEHQDWTMKRACTDSYNKTLKNWHGWLASSSFNVAMKLAPDRKKFM DMIGGTGDPDSDMEKFCASFSSVLAENHKFLASVGMDNLKS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 197 | 197 | 8.4E-98 | – | |
| PANTHER | 1 | 197 | 197 | 8.4E-98 | – | |
| Gene3D | 4 | 200 | 197 | 3.3E-52 | ||
| SUPERFAMILY | 15 | 199 | 185 | 2.62E-52 | ||
| Pfam | 23 | 164 | 142 | 6.0E-45 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Cytoplasm | All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures. | ||
| Biological process | Intermembrane lipid transfer | The transport of lipids between membranes in which a lipid molecule is transported through an aqueous phase from the outer leaflet of a donor membrane to the outer leaflet of an acceptor membrane. This process does not require metabolic energy and can be either spontaneous or mediated by lipid transfer proteins (LTPs). | ||
| Molecular function | Intermembrane lipid transfer activity | Enables the removal of a lipid from the outer leaflet of a donor membrane, transports it through the aqueous phase while protected in a hydrophobic pocket, and brings it to the outer leaflet of an acceptor membrane. |
Expression pattern of LotjaGi1g1v0707000.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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