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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0715000 |
| Transcript ID | LotjaGi1g1v0715000.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Protein longifolia 1; TAIR: AT3G63430.1 zinc finger CCCH domain protein; Swiss-Prot: sp|Q9LF24|LNG1_ARATH Protein LONGIFOLIA 1; TrEMBL-Plants: tr|A0A072UDE6|A0A072UDE6_MEDTR DUF4378 domain protein; Found in the gene: LotjaGi1g1v0715000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:128293605..128297616) extracted from Lotus japonicus Gifu genome v1.2.
GAAAAATTAGAGGCTTAAAGTAAGATTTGGCAACATATCTTGAGTAGCGTTCAAAGACGACGAGAAAAGCGGGAGTCTAG AATAAAAGGCAGTGTCGAGTGACGAGAGGCAGAGAAAGAAGAACAAACAAACAAACAACACAGAATGTTAAAATGAAAAT GGAGTCATCACACTGAGAGAGAGAGTGAGTGAGTGAGAATTCAATAGAGAGAAAAATGGGGTTCGGAGATCAGAAGCTAG AAAAACAAATCGGCAAACAGGTGGGGTGCATGACCGGTTTCCTCCACATCTTCGACCGCCACGCCGGAAAACGCATCTCC TCCGCCAAACGACTCCCTCCTCCACCGCCTCCGGAAACACACGGCGCCTCTCCGCCGGAATCATCCAAACCGGAAACACA GAACGAACCTCCGAAGACGCAGACGCCATGTCCCCTTCCGGTTCTCGAATTCAAGGAAGCCACGACGACGAGAAAATTCT CCAAAGAAGCTCCGAGACTATCCTTAGATAGCAGAGCCATCGTGGATGCCAGAGGAAGCTTCCACCCGAGAGAGGTGGAG AAGCAGCGACGATCCACCAGCGTCGTTGCTAAGCTCATGGGGCTGGAGGATTCGGATTCCGATTCCGACCCGGAGCTTCG AAGATCCGCTTCTGAATCCAGGATTCCCAAAGAAGATCTGGTTCTGCCGAAACCACAGTATCGTTTCTTCGACACCACAA ATTTCCAGTTAAAGCAATTGCAGAACCACCATGTTGATAAACGAGCATCAGATCCAAACGCGAGGGGAATGATGAGACAG AAGAAGAGTTTCTTCGATTCCGCTGATTTTTTCCCTGGAACGAAACAGAGTGTTTCTGTTGTTCATGGAGAGATTGAAAG GAGGTTGAAGATGCGAGGGATCGATGAGCCTTCCAAGGATCTCGATGCTCTTAAGCAAATCCTGGAAGCGTTGCAGCTCA AAGGCCTCCTCCATTCCAAAAACTCAACGCTTCCGTTGAACCACCGGAACTTCGTCTACGACGGAACGTTCTCGTATAAC GATTCTCCGATTGTTGTCATGAAACCTGGAAGATCTTCTGGTTCTTTGAATCAAACCAGATTCACCGGGAACGATTCTCC ACCGGCATCTGCATTCCGGTCGAGGCAAGAACCGGGTCGAAATGTGAAGAGCAGAAACCCAAACTCGCCAACTCACAGCC CGAACCGGATGAGGAAGGGGACAATTACAAACGCGGAGAAGCAGAGAAAAGTGAACGACGGTGGTGATCGGAAAAGGACT AGTCCGGTTCATTCTCCCCGGGTGAACTCCAGACTCAATGGACCGGACCGGCAAGCAACCTCCCGGTCGCCGAGGATGAG ACAAACAAACCGTTACCAGAAGGAGGAGAAGGCCGTGCCCGTGGTTGTGGCCACCGCGGAGGACGCATCATCCACCGTTT CCGATAGCAGTTTCAGCACATCTTCATACACTGATACAGAGGTACGTATAATTAGATTTAATATTTTTTAATTTACAATC AGATTAGGATTAATTGTTTAATTTTGAAATTAGTTATATATTTTTGGGAGTGGTGGTGATTGTTGTTTACGGTGGTGCAG AGGTTGAAGGTGGAGGATCCGTACAGGGAAGGGAAGAATCTACTCCGGAGGTGTGATAAGTTACTGAACAGCATAGCAGA GCTACAACCGAGTCCGGTATCGGTGCTTGATTCATCAGTTTACAGGGATGATTCGTCGTGTTCACCTTCACCGGTGACGA AGCGGTGCATTGATTACAGAGGTGAGTGAGCAGTTATGCATTTCAGTGGTCACAATCATCATTTGGTAGCATTAGGATTT TTTAGGTAGTGTGACTTTTTAGTGGGGGATGAGTTAATATTGTGCGTGACATCATTGATGGGTAAAGTTTAGGCTAGGCA TGTTTAGGCCTTTTTAACCACCTCTCCTGTTCTTTCCTTTCCTTCACAACACCAACAAACAAGTCATATCAACAAGGTGT AATGTGTAATATAGCTCGTAGATAATTGAGCTTCTTAATCATCAGTCAAGGGTTTGATCTGTCTGGACGGTATATATAAA AAATGATTTATTGAGAAAATTCGACCATTTAAAAAGGGTAATGTTTCATCCACACCTCTCTTTTGAGGTGGAGAGGTGAA ATGATGAAAGAGATAGGAAGAAAAAAAAAGTAAGAGAGAGAAAATATGAGATGTGATAGATGATAACATGAGAAAGATAG AAATAAAAAAATGTGGAAATAAAATGTTTAAAAAATGAGATGTATATATATCATTACTCATTTAAAAAATCTCATAGATT CAAGATTAGTTTCATTACTACCGACAATATGGATACATATACAAACACTAGTAGCAACTATTATTTAATGGTGAGTCTAG TATAGGATAGGGAGGAGAAGCAGGATTTGTCTTTCTATCTATGCACCTAGCTTAGTGGCGTGCTATCCCTTCTTATCCGA CGTGGACCAATCATTTGACACTATTGACTACGTAACACTAGTCGATCACGTGGGAGTAATGGCGATCGTCGCTTTGCTGC TTTTTGAGTGATTTTGATAGTGGCGTCCGTGAGAAGATTTGGATTACCTCAAAAAGAAGGAACAAAAAAAAAAGTGCAGA TCTCACATCTCCAAATACGAACAGTGTCGTTATCTCTGTTTTCTATTTTGATTTTTGATTACGAATTATGCATATTAATC TTCTTTCTTGTTAATTTTAATCTCATGAAATTGCAGATCAAACCGAGTTTGAAGATGATGTGTGGAGCGCAGATCTGTAT TGCAGTGAAGCCAATTTCGAAGATCGCGATTTCAATTATGTTTCTGAGATACTCCGTGCTTCTAATCGCTTACCGGAAAA CAGCAACGTGTTTTTGTTTCTGGAGAAGCAGCAGAGCCTCAGGGGAAACGAGAACAACACTTCCAAAGCCTCCACTCTCC AGAGGCGGTTAATCTTCGACACGGTTCACGAGATTCTCAATCGGAACCGCCGTCTGCCGCCATGGAGGGTGGATAACGCG CCGTTGCTACGTCGGATCTGGCCGGAGTTTGTGAGGATCCGGGAGAGGGAAGTCTCATCGGAGGACATGTTCGAAGTGAT ATGCGGGTTGTTGAGGAAGGACATGGCGGAGGAGAGCACCACCGTGAATGAATGGGGAGAATCTCCGGTGGAGATCGGGG ATATGGTGCTGGACATCGAACGGTTCATATTCAAAGATCTCATCGGCGAAACCATTCGAGATCTGGCTTCGTTTAAAGGA AAACGTAACAGAGTCTCAGCACTTCGCAGGAAGTTGGTGTTTTGAAAAAGAAAAAGAAAATGAAAAGCTAATTAATAATT AATTAATATAATATATATTTTAAAATAACATGTCAAAGAAAAAGTGAGGGTCGCTTTGTTTGAATTTTTCGCGCGCTTGC TTTTCCCTTTGCGGATGATCAACTCCATGGTTTTTTTTAATGGTGGAATGAGGGGTTTAAGACCTGAAATCCAGGCAATT GTAATGAAGATCACTTTATAGTTTATAGTAGTTTAGGAATATAGTTTGGTGATTATGCTTTTTGGAGAGTGGTTAGAAAA ATATGGAAATGTCAAAAGTTGCAATAATTGGTAAGATCTGAGATGTGATGCACAAGCACCTGTTTGCTTAATAATTTTTG TTACCAACTGGTATGATTTATGCTGTCCTACAAGAAATTAGAGAGTATTTGTAAAAAATTTTAATATTACTTTGTGAGGA TTTTTTCTTTTACTCTAATTTTGCGGCAAACTGGAGGTCCTACAAGAAAATAATGGATGGAGGTGCATATAAGTCAATTG GCACGATTAGAATTAGGGTGCAGTACTTTTGGACTTAAGTGCACATTTTAAGAAAAAAAAATTAGTGATTGAATTCTTGT ACGCCTTGAAAAACAATGAACAATATACTATTTAGAGATATTTTCTCTGAAAGGTATATTGACTTATATGTTAAGAGATG CTAATCATTTAA
CDS sequence (LotjaGi1g1v0715000.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGGTTCGGAGATCAGAAGCTAGAAAAACAAATCGGCAAACAGGTGGGGTGCATGACCGGTTTCCTCCACATCTTCGA CCGCCACGCCGGAAAACGCATCTCCTCCGCCAAACGACTCCCTCCTCCACCGCCTCCGGAAACACACGGCGCCTCTCCGC CGGAATCATCCAAACCGGAAACACAGAACGAACCTCCGAAGACGCAGACGCCATGTCCCCTTCCGGTTCTCGAATTCAAG GAAGCCACGACGACGAGAAAATTCTCCAAAGAAGCTCCGAGACTATCCTTAGATAGCAGAGCCATCGTGGATGCCAGAGG AAGCTTCCACCCGAGAGAGGTGGAGAAGCAGCGACGATCCACCAGCGTCGTTGCTAAGCTCATGGGGCTGGAGGATTCGG ATTCCGATTCCGACCCGGAGCTTCGAAGATCCGCTTCTGAATCCAGGATTCCCAAAGAAGATCTGGTTCTGCCGAAACCA CAGTATCGTTTCTTCGACACCACAAATTTCCAGTTAAAGCAATTGCAGAACCACCATGTTGATAAACGAGCATCAGATCC AAACGCGAGGGGAATGATGAGACAGAAGAAGAGTTTCTTCGATTCCGCTGATTTTTTCCCTGGAACGAAACAGAGTGTTT CTGTTGTTCATGGAGAGATTGAAAGGAGGTTGAAGATGCGAGGGATCGATGAGCCTTCCAAGGATCTCGATGCTCTTAAG CAAATCCTGGAAGCGTTGCAGCTCAAAGGCCTCCTCCATTCCAAAAACTCAACGCTTCCGTTGAACCACCGGAACTTCGT CTACGACGGAACGTTCTCGTATAACGATTCTCCGATTGTTGTCATGAAACCTGGAAGATCTTCTGGTTCTTTGAATCAAA CCAGATTCACCGGGAACGATTCTCCACCGGCATCTGCATTCCGGTCGAGGCAAGAACCGGGTCGAAATGTGAAGAGCAGA AACCCAAACTCGCCAACTCACAGCCCGAACCGGATGAGGAAGGGGACAATTACAAACGCGGAGAAGCAGAGAAAAGTGAA CGACGGTGGTGATCGGAAAAGGACTAGTCCGGTTCATTCTCCCCGGGTGAACTCCAGACTCAATGGACCGGACCGGCAAG CAACCTCCCGGTCGCCGAGGATGAGACAAACAAACCGTTACCAGAAGGAGGAGAAGGCCGTGCCCGTGGTTGTGGCCACC GCGGAGGACGCATCATCCACCGTTTCCGATAGCAGTTTCAGCACATCTTCATACACTGATACAGAGAGGTTGAAGGTGGA GGATCCGTACAGGGAAGGGAAGAATCTACTCCGGAGGTGTGATAAGTTACTGAACAGCATAGCAGAGCTACAACCGAGTC CGGTATCGGTGCTTGATTCATCAGTTTACAGGGATGATTCGTCGTGTTCACCTTCACCGGTGACGAAGCGGTGCATTGAT TACAGAGATCAAACCGAGTTTGAAGATGATGTGTGGAGCGCAGATCTGTATTGCAGTGAAGCCAATTTCGAAGATCGCGA TTTCAATTATGTTTCTGAGATACTCCGTGCTTCTAATCGCTTACCGGAAAACAGCAACGTGTTTTTGTTTCTGGAGAAGC AGCAGAGCCTCAGGGGAAACGAGAACAACACTTCCAAAGCCTCCACTCTCCAGAGGCGGTTAATCTTCGACACGGTTCAC GAGATTCTCAATCGGAACCGCCGTCTGCCGCCATGGAGGGTGGATAACGCGCCGTTGCTACGTCGGATCTGGCCGGAGTT TGTGAGGATCCGGGAGAGGGAAGTCTCATCGGAGGACATGTTCGAAGTGATATGCGGGTTGTTGAGGAAGGACATGGCGG AGGAGAGCACCACCGTGAATGAATGGGGAGAATCTCCGGTGGAGATCGGGGATATGGTGCTGGACATCGAACGGTTCATA TTCAAAGATCTCATCGGCGAAACCATTCGAGATCTGGCTTCGTTTAAAGGAAAACGTAACAGAGTCTCAGCACTTCGCAG GAAGTTGGTGTTTTGA
Protein sequence (LotjaGi1g1v0715000.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGFGDQKLEKQIGKQVGCMTGFLHIFDRHAGKRISSAKRLPPPPPPETHGASPPESSKPETQNEPPKTQTPCPLPVLEFK EATTTRKFSKEAPRLSLDSRAIVDARGSFHPREVEKQRRSTSVVAKLMGLEDSDSDSDPELRRSASESRIPKEDLVLPKP QYRFFDTTNFQLKQLQNHHVDKRASDPNARGMMRQKKSFFDSADFFPGTKQSVSVVHGEIERRLKMRGIDEPSKDLDALK QILEALQLKGLLHSKNSTLPLNHRNFVYDGTFSYNDSPIVVMKPGRSSGSLNQTRFTGNDSPPASAFRSRQEPGRNVKSR NPNSPTHSPNRMRKGTITNAEKQRKVNDGGDRKRTSPVHSPRVNSRLNGPDRQATSRSPRMRQTNRYQKEEKAVPVVVAT AEDASSTVSDSSFSTSSYTDTERLKVEDPYREGKNLLRRCDKLLNSIAELQPSPVSVLDSSVYRDDSSCSPSPVTKRCID YRDQTEFEDDVWSADLYCSEANFEDRDFNYVSEILRASNRLPENSNVFLFLEKQQSLRGNENNTSKASTLQRRLIFDTVH EILNRNRRLPPWRVDNAPLLRRIWPEFVRIREREVSSEDMFEVICGLLRKDMAEESTTVNEWGESPVEIGDMVLDIERFI FKDLIGETIRDLASFKGKRNRVSALRRKLVF
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 5 | 671 | 667 | 4.2E-212 | ||
| PANTHER | 5 | 671 | 667 | 4.2E-212 | – | |
| MobiDBLite | 33 | 75 | 43 | - | – | |
| MobiDBLite | 38 | 52 | 15 | - | – | |
| MobiDBLite | 129 | 152 | 24 | - | – | |
| MobiDBLite | 131 | 152 | 22 | - | – | |
| MobiDBLite | 284 | 393 | 110 | - | – | |
| MobiDBLite | 286 | 306 | 21 | - | – | |
| MobiDBLite | 316 | 336 | 21 | - | – | |
| MobiDBLite | 337 | 358 | 22 | - | – | |
| MobiDBLite | 360 | 382 | 23 | - | – | |
| Pfam | 507 | 647 | 141 | 5.6E-15 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Regulation of monopolar cell growth | Any process that modulates the frequency, rate or extent of monopolar cell growth, polarized growth from one end of a cell. |
Expression pattern of LotjaGi1g1v0715000.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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